data_SMK
# 
_chem_comp.id                                    SMK 
_chem_comp.name                                  "(3S,6S,7R,9aS)-6-{[(2S)-2-aminobutanoyl]amino}-7-(2-aminoethyl)-N-(diphenylmethyl)-5-oxooctahydro-1H-pyrrolo[1,2-a]azepine-3-carboxamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C29 H39 N5 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2008-10-22 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        505.652 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     SMK 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3EYL 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
SMK CAA  CAA  C 0 1 N N N 29.781 -6.724  7.570  -1.799 -4.680 2.097  CAA  DRG 1  
SMK CB   CB   C 0 1 N N N 29.360 -5.440  6.868  -2.157 -3.731 0.952  CB   DRG 2  
SMK CA   CA   C 0 1 N N S 29.473 -4.246  7.816  -3.253 -2.767 1.412  CA   DRG 3  
SMK N    N    N 0 1 N N N 28.860 -3.055  7.210  -4.483 -3.521 1.691  N    DRG 4  
SMK C    C    C 0 1 N N N 30.947 -3.998  8.095  -3.519 -1.755 0.328  C    DRG 5  
SMK O    O    O 0 1 N N N 31.732 -3.709  7.196  -4.472 -1.893 -0.410 O    DRG 6  
SMK NAY  NAY  N 0 1 N N N 31.315 -4.129  9.353  -2.698 -0.697 0.178  NAY  DRG 7  
SMK CBI  CBI  C 0 1 N N S 32.727 -3.930  9.693  -2.954 0.276  -0.864 CBI  DRG 8  
SMK CBB  CBB  C 0 1 N N N 33.214 -5.075  10.607 -1.686 0.944  -1.342 CBB  DRG 9  
SMK OAF  OAF  O 0 1 N N N 32.400 -5.901  11.015 -1.259 0.705  -2.441 OAF  DRG 10 
SMK NBK  NBK  N 0 1 N N N 34.489 -5.250  10.943 -1.027 1.809  -0.535 NBK  DRG 11 
SMK CBF  CBF  C 0 1 N N R 33.011 -2.485  10.194 -3.951 1.360  -0.433 CBF  DRG 12 
SMK CAS  CAS  C 0 1 N N N 32.333 -2.119  11.525 -5.372 0.900  -0.774 CAS  DRG 13 
SMK CAQ  CAQ  C 0 1 N N N 31.952 -0.630  11.559 -6.361 2.025  -0.463 CAQ  DRG 14 
SMK NAB  NAB  N 0 1 N N N 30.690 -0.417  10.837 -7.723 1.583  -0.790 NAB  DRG 15 
SMK CAT  CAT  C 0 1 N N N 34.529 -2.154  10.207 -3.836 1.612  1.068  CAT  DRG 16 
SMK CAU  CAU  C 0 1 N N N 35.386 -3.015  11.151 -2.402 1.777  1.541  CAU  DRG 17 
SMK CBG  CBG  C 0 1 N N S 35.633 -4.408  10.567 -1.587 2.602  0.554  CBG  DRG 18 
SMK CAV  CAV  C 0 1 N N N 36.853 -5.028  11.243 -0.373 3.199  1.296  CAV  DRG 19 
SMK CAW  CAW  C 0 1 N N N 36.431 -6.450  11.589 0.635  3.385  0.143  CAW  DRG 20 
SMK CBJ  CBJ  C 0 1 N N S 34.918 -6.365  11.792 0.406  2.109  -0.681 CBJ  DRG 21 
SMK CBA  CBA  C 0 1 N N N 34.545 -6.095  13.254 1.235  0.973  -0.140 CBA  DRG 22 
SMK OAE  OAE  O 0 1 N N N 34.425 -4.952  13.690 0.691  -0.004 0.329  OAE  DRG 23 
SMK NAX  NAX  N 0 1 N N N 34.357 -7.186  13.983 2.580  1.044  -0.176 NAX  DRG 24 
SMK CBH  CBH  C 0 1 N N N 33.973 -7.110  15.396 3.386  -0.061 0.351  CBH  DRG 25 
SMK CBC  CBC  C 0 1 Y N N 35.134 -6.594  16.262 3.556  -1.111 -0.717 CBC  DRG 26 
SMK CAM  CAM  C 0 1 Y N N 34.844 -5.820  17.389 3.493  -2.451 -0.384 CAM  DRG 27 
SMK CAI  CAI  C 0 1 Y N N 35.871 -5.326  18.194 3.649  -3.415 -1.363 CAI  DRG 28 
SMK CAG  CAG  C 0 1 Y N N 37.195 -5.606  17.862 3.869  -3.038 -2.674 CAG  DRG 29 
SMK CAJ  CAJ  C 0 1 Y N N 37.489 -6.375  16.734 3.931  -1.698 -3.007 CAJ  DRG 30 
SMK CAN  CAN  C 0 1 Y N N 36.462 -6.869  15.928 3.771  -0.734 -2.029 CAN  DRG 31 
SMK CBD  CBD  C 0 1 Y N N 33.448 -8.480  15.819 4.738  0.458  0.766  CBD  DRG 32 
SMK CAO  CAO  C 0 1 Y N N 32.360 -9.004  15.120 5.332  -0.010 1.923  CAO  DRG 33 
SMK CAK  CAK  C 0 1 Y N N 31.831 -10.244 15.455 6.573  0.465  2.304  CAK  DRG 34 
SMK CAH  CAH  C 0 1 Y N N 32.408 -10.958 16.504 7.220  1.408  1.528  CAH  DRG 35 
SMK CAL  CAL  C 0 1 Y N N 33.495 -10.439 17.208 6.627  1.875  0.370  CAL  DRG 36 
SMK CAP  CAP  C 0 1 Y N N 34.021 -9.198  16.865 5.388  1.397  -0.013 CAP  DRG 37 
SMK HAA  HAA  H 0 1 N N N 29.883 -7.531  6.829  -1.441 -4.103 2.949  HAA  DRG 38 
SMK HAAA HAAA H 0 0 N N N 30.746 -6.566  8.075  -2.683 -5.248 2.388  HAAA DRG 39 
SMK HAAB HAAB H 0 0 N N N 29.019 -7.002  8.313  -1.018 -5.367 1.770  HAAB DRG 40 
SMK HB   HB   H 0 1 N N N 30.015 -5.273  6.000  -1.273 -3.164 0.661  HB   DRG 41 
SMK HBA  HBA  H 0 1 N N N 28.313 -5.539  6.545  -2.515 -4.308 0.100  HBA  DRG 42 
SMK HA   HA   H 0 1 N N N 28.943 -4.459  8.756  -2.929 -2.254 2.317  HA   DRG 43 
SMK HN   HN   H 0 1 N N N 28.721 -2.357  7.913  -5.202 -2.916 2.057  HN   DRG 44 
SMK HNA  HNA  H 0 1 N N N 29.463 -2.695  6.498  -4.804 -4.007 0.866  HNA  DRG 45 
SMK HNAY HNAY H 0 0 N N N 30.646 -4.359  10.060 -1.936 -0.586 0.768  HNAY DRG 46 
SMK HBI  HBI  H 0 1 N N N 33.346 -3.999  8.786  -3.392 -0.245 -1.730 HBI  DRG 47 
SMK HBF  HBF  H 0 1 N N N 32.531 -1.837  9.446  -3.732 2.279  -0.982 HBF  DRG 48 
SMK HAS  HAS  H 0 1 N N N 31.421 -2.724  11.640 -5.428 0.649  -1.833 HAS  DRG 49 
SMK HASA HASA H 0 0 N N N 33.038 -2.320  12.345 -5.621 0.022  -0.179 HASA DRG 50 
SMK HAQ  HAQ  H 0 1 N N N 31.831 -0.310  12.604 -6.304 2.276  0.596  HAQ  DRG 51 
SMK HAQA HAQA H 0 0 N N N 32.747 -0.043  11.077 -6.111 2.903  -1.059 HAQA DRG 52 
SMK HNAB HNAB H 0 0 N N N 29.935 -0.369  11.491 -7.955 0.733  -0.299 HNAB DRG 53 
SMK HNAA HNAA H 0 0 N N N 30.741 0.439   10.323 -8.396 2.309  -0.593 HNAA DRG 54 
SMK HAT  HAT  H 0 1 N N N 34.909 -2.304  9.186  -4.397 2.524  1.317  HAT  DRG 55 
SMK HATA HATA H 0 0 N N N 34.613 -1.121  10.575 -4.308 0.788  1.614  HATA DRG 56 
SMK HAU  HAU  H 0 1 N N N 36.355 -2.517  11.304 -2.415 2.317  2.505  HAU  DRG 57 
SMK HAUA HAUA H 0 0 N N N 34.847 -3.128  12.103 -1.920 0.823  1.728  HAUA DRG 58 
SMK HBG  HBG  H 0 1 N N N 35.775 -4.338  9.478  -2.205 3.416  0.153  HBG  DRG 59 
SMK HAV  HAV  H 0 1 N N N 37.721 -5.028  10.567 -0.627 4.156  1.757  HAV  DRG 60 
SMK HAVA HAVA H 0 0 N N N 37.162 -4.462  12.134 0.004  2.501  2.046  HAVA DRG 61 
SMK HAW  HAW  H 0 1 N N N 36.683 -7.147  10.776 0.401  4.273  -0.444 HAW  DRG 62 
SMK HAWA HAWA H 0 0 N N N 36.949 -6.831  12.482 1.658  3.428  0.518  HAWA DRG 63 
SMK HBJ  HBJ  H 0 1 N N N 34.429 -7.315  11.531 0.646  2.287  -1.729 HBJ  DRG 64 
SMK HNAX HNAX H 0 0 N N N 34.480 -8.083  13.559 3.015  1.826  -0.550 HNAX DRG 65 
SMK HBH  HBH  H 0 1 N N N 33.167 -6.376  15.544 2.884  -0.498 1.214  HBH  DRG 66 
SMK HAM  HAM  H 0 1 N N N 33.816 -5.602  17.639 3.321  -2.746 0.641  HAM  DRG 67 
SMK HAI  HAI  H 0 1 N N N 35.642 -4.732  19.066 3.600  -4.462 -1.103 HAI  DRG 68 
SMK HAG  HAG  H 0 1 N N N 37.996 -5.227  18.479 3.992  -3.790 -3.439 HAG  DRG 69 
SMK HAJ  HAJ  H 0 1 N N N 38.518 -6.589  16.484 4.103  -1.403 -4.032 HAJ  DRG 70 
SMK HAN  HAN  H 0 1 N N N 36.692 -7.459  15.053 3.816  0.313  -2.290 HAN  DRG 71 
SMK HAO  HAO  H 0 1 N N N 31.924 -8.439  14.309 4.827  -0.747 2.530  HAO  DRG 72 
SMK HAK  HAK  H 0 1 N N N 30.988 -10.647 14.913 7.037  0.101  3.209  HAK  DRG 73 
SMK HAH  HAH  H 0 1 N N N 32.009 -11.924 16.775 8.189  1.781  1.826  HAH  DRG 74 
SMK HAL  HAL  H 0 1 N N N 33.929 -11.002 18.021 7.132  2.612  -0.237 HAL  DRG 75 
SMK HAP  HAP  H 0 1 N N N 34.865 -8.795  17.405 4.926  1.759  -0.920 HAP  DRG 76 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
SMK CAA CB   SING N N 1  
SMK CB  CA   SING N N 2  
SMK CA  N    SING N N 3  
SMK CA  C    SING N N 4  
SMK C   O    DOUB N N 5  
SMK C   NAY  SING N N 6  
SMK NAY CBI  SING N N 7  
SMK CBI CBB  SING N N 8  
SMK CBI CBF  SING N N 9  
SMK CBB OAF  DOUB N N 10 
SMK CBB NBK  SING N N 11 
SMK NBK CBG  SING N N 12 
SMK NBK CBJ  SING N N 13 
SMK CBF CAS  SING N N 14 
SMK CBF CAT  SING N N 15 
SMK CAS CAQ  SING N N 16 
SMK CAQ NAB  SING N N 17 
SMK CAT CAU  SING N N 18 
SMK CAU CBG  SING N N 19 
SMK CBG CAV  SING N N 20 
SMK CAV CAW  SING N N 21 
SMK CAW CBJ  SING N N 22 
SMK CBJ CBA  SING N N 23 
SMK CBA OAE  DOUB N N 24 
SMK CBA NAX  SING N N 25 
SMK NAX CBH  SING N N 26 
SMK CBH CBC  SING N N 27 
SMK CBH CBD  SING N N 28 
SMK CBC CAM  DOUB Y N 29 
SMK CBC CAN  SING Y N 30 
SMK CAM CAI  SING Y N 31 
SMK CAI CAG  DOUB Y N 32 
SMK CAG CAJ  SING Y N 33 
SMK CAJ CAN  DOUB Y N 34 
SMK CBD CAO  DOUB Y N 35 
SMK CBD CAP  SING Y N 36 
SMK CAO CAK  SING Y N 37 
SMK CAK CAH  DOUB Y N 38 
SMK CAH CAL  SING Y N 39 
SMK CAL CAP  DOUB Y N 40 
SMK CAA HAA  SING N N 41 
SMK CAA HAAA SING N N 42 
SMK CAA HAAB SING N N 43 
SMK CB  HB   SING N N 44 
SMK CB  HBA  SING N N 45 
SMK CA  HA   SING N N 46 
SMK N   HN   SING N N 47 
SMK N   HNA  SING N N 48 
SMK NAY HNAY SING N N 49 
SMK CBI HBI  SING N N 50 
SMK CBF HBF  SING N N 51 
SMK CAS HAS  SING N N 52 
SMK CAS HASA SING N N 53 
SMK CAQ HAQ  SING N N 54 
SMK CAQ HAQA SING N N 55 
SMK NAB HNAB SING N N 56 
SMK NAB HNAA SING N N 57 
SMK CAT HAT  SING N N 58 
SMK CAT HATA SING N N 59 
SMK CAU HAU  SING N N 60 
SMK CAU HAUA SING N N 61 
SMK CBG HBG  SING N N 62 
SMK CAV HAV  SING N N 63 
SMK CAV HAVA SING N N 64 
SMK CAW HAW  SING N N 65 
SMK CAW HAWA SING N N 66 
SMK CBJ HBJ  SING N N 67 
SMK NAX HNAX SING N N 68 
SMK CBH HBH  SING N N 69 
SMK CAM HAM  SING N N 70 
SMK CAI HAI  SING N N 71 
SMK CAG HAG  SING N N 72 
SMK CAJ HAJ  SING N N 73 
SMK CAN HAN  SING N N 74 
SMK CAO HAO  SING N N 75 
SMK CAK HAK  SING N N 76 
SMK CAH HAH  SING N N 77 
SMK CAL HAL  SING N N 78 
SMK CAP HAP  SING N N 79 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
SMK SMILES           ACDLabs              10.04 "O=C(NC(c1ccccc1)c2ccccc2)C4N3C(=O)C(NC(=O)C(N)CC)C(CCC3CC4)CCN" 
SMK SMILES_CANONICAL CACTVS               3.341 "CC[C@H](N)C(=O)N[C@H]1[C@@H](CCN)CC[C@H]2CC[C@H](N2C1=O)C(=O)NC(c3ccccc3)c4ccccc4" 
SMK SMILES           CACTVS               3.341 "CC[CH](N)C(=O)N[CH]1[CH](CCN)CC[CH]2CC[CH](N2C1=O)C(=O)NC(c3ccccc3)c4ccccc4" 
SMK SMILES_CANONICAL "OpenEye OEToolkits" 1.5.0 "CC[C@@H](C(=O)N[C@H]1[C@H](CC[C@H]2CC[C@H](N2C1=O)C(=O)NC(c3ccccc3)c4ccccc4)CCN)N" 
SMK SMILES           "OpenEye OEToolkits" 1.5.0 "CCC(C(=O)NC1C(CCC2CCC(N2C1=O)C(=O)NC(c3ccccc3)c4ccccc4)CCN)N" 
SMK InChI            InChI                1.03  
"InChI=1S/C29H39N5O3/c1-2-23(31)27(35)33-26-21(17-18-30)13-14-22-15-16-24(34(22)29(26)37)28(36)32-25(19-9-5-3-6-10-19)20-11-7-4-8-12-20/h3-12,21-26H,2,13-18,30-31H2,1H3,(H,32,36)(H,33,35)/t21-,22+,23+,24+,26+/m1/s1" 
SMK InChIKey         InChI                1.03  KQHWCFZCUNTTCW-VEGWMBEDSA-N 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
SMK "SYSTEMATIC NAME" ACDLabs              10.04 "(3S,6S,7R,9aS)-6-{[(2S)-2-aminobutanoyl]amino}-7-(2-aminoethyl)-N-(diphenylmethyl)-5-oxooctahydro-1H-pyrrolo[1,2-a]azepine-3-carboxamide"         
SMK "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.5.0 "(3S,6S,7R,9aS)-6-[[(2S)-2-aminobutanoyl]amino]-7-(2-aminoethyl)-N-benzhydryl-5-oxo-1,2,3,6,7,8,9,9a-octahydropyrrolo[5,1-g]azepine-3-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
SMK "Create component"     2008-10-22 RCSB 
SMK "Modify aromatic_flag" 2011-06-04 RCSB 
SMK "Modify descriptor"    2011-06-04 RCSB 
# 
