data_NDK
# 
_chem_comp.id                                    NDK 
_chem_comp.name                                  "6-(4-{[5-fluoro-6-(propan-2-yl)pyridin-3-yl]acetyl}piperazin-1-yl)pyridazine-3-carbonitrile" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H21 F N6 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-04-01 
_chem_comp.pdbx_modified_date                    2023-03-31 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        368.408 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     NDK 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7UE6 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
NDK C17 C1  C 0 1 Y N N -23.670 27.122 -29.270 -6.837 0.746  0.138  C17 NDK 1  
NDK C20 C2  C 0 1 Y N N -23.332 25.766 -29.102 -6.570 -0.357 0.960  C20 NDK 2  
NDK C21 C3  C 0 1 Y N N -23.739 25.126 -27.926 -5.329 -0.959 0.855  C21 NDK 3  
NDK C22 C4  C 0 1 N N N -24.218 24.105 -25.164 -2.372 -0.293 -1.215 C22 NDK 4  
NDK C26 C5  C 0 1 Y N N -28.237 20.748 -19.527 4.738  1.397  0.204  C26 NDK 5  
NDK C01 C6  C 0 1 N N N -29.659 21.065 -16.797 7.486  -0.421 1.511  C01 NDK 6  
NDK C02 C7  C 0 1 N N N -28.349 20.212 -17.033 7.098  0.609  0.448  C02 NDK 7  
NDK C03 C8  C 0 1 N N N -28.647 18.694 -17.130 8.014  0.456  -0.769 C03 NDK 8  
NDK C04 C9  C 0 1 Y N N -27.597 20.782 -18.279 5.667  0.386  0.031  C04 NDK 9  
NDK C06 C10 C 0 1 Y N N -25.716 21.824 -19.173 4.075  -1.010 -0.875 C06 NDK 10 
NDK C07 C11 C 0 1 Y N N -26.290 21.808 -20.443 3.092  -0.049 -0.733 C07 NDK 11 
NDK C08 C12 C 0 1 N N N -25.543 22.383 -21.586 1.678  -0.333 -1.170 C08 NDK 12 
NDK C09 C13 C 0 1 N N N -26.249 23.682 -22.077 0.906  -0.927 -0.020 C09 NDK 13 
NDK C11 C14 C 0 1 N N N -26.594 25.246 -23.964 -1.161 -1.844 0.929  C11 NDK 14 
NDK C12 C15 C 0 1 N N N -25.589 26.107 -24.686 -2.460 -1.048 1.088  C12 NDK 15 
NDK C14 C16 C 0 1 Y N N -24.446 25.899 -27.008 -4.419 -0.431 -0.062 C14 NDK 16 
NDK C18 C17 C 0 1 N N N -23.276 27.825 -30.487 -8.105 1.408  0.213  C18 NDK 17 
NDK C23 C18 C 0 1 N N N -25.121 23.312 -24.241 -1.069 -1.059 -1.468 C23 NDK 18 
NDK C25 C19 C 0 1 Y N N -27.575 21.268 -20.641 3.422  1.180  -0.184 C25 NDK 19 
NDK F01 F1  F 0 1 N N N -29.501 20.206 -19.667 5.105  2.578  0.749  F01 NDK 20 
NDK N07 N1  N 0 1 Y N N -26.364 21.315 -18.111 5.314  -0.771 -0.496 N07 NDK 21 
NDK N10 N2  N 0 1 N N N -25.988 24.085 -23.433 -0.389 -1.263 -0.180 N10 NDK 22 
NDK N13 N3  N 0 1 N N N -24.917 25.286 -25.740 -3.164 -1.002 -0.201 N13 NDK 23 
NDK N15 N4  N 0 1 Y N N -24.707 27.148 -27.250 -4.757 0.619  -0.801 N15 NDK 24 
NDK N16 N5  N 0 1 Y N N -24.333 27.757 -28.366 -5.908 1.180  -0.707 N16 NDK 25 
NDK N19 N6  N 0 1 N N N -22.966 28.347 -31.423 -9.110 1.933  0.272  N19 NDK 26 
NDK O24 O1  O 0 1 N N N -26.992 24.351 -21.409 1.451  -1.102 1.049  O24 NDK 27 
NDK H1  H1  H 0 1 N N N -22.774 25.235 -29.859 -7.311 -0.725 1.654  H1  NDK 28 
NDK H2  H2  H 0 1 N N N -23.516 24.086 -27.740 -5.072 -1.811 1.466  H2  NDK 29 
NDK H3  H3  H 0 1 N N N -23.886 23.452 -25.985 -2.141 0.711  -0.860 H3  NDK 30 
NDK H4  H4  H 0 1 N N N -23.343 24.452 -24.595 -2.942 -0.229 -2.142 H4  NDK 31 
NDK H5  H5  H 0 1 N N N -30.199 20.674 -15.922 8.521  -0.259 1.812  H5  NDK 32 
NDK H6  H6  H 0 1 N N N -29.385 22.116 -16.620 6.834  -0.312 2.377  H6  NDK 33 
NDK H7  H7  H 0 1 N N N -30.304 20.999 -17.685 7.380  -1.425 1.100  H7  NDK 34 
NDK H8  H8  H 0 1 N N N -27.699 20.366 -16.159 7.205  1.613  0.859  H8  NDK 35 
NDK H9  H9  H 0 1 N N N -29.175 18.365 -16.223 9.049  0.618  -0.467 H9  NDK 36 
NDK H10 H10 H 0 1 N N N -29.276 18.500 -18.011 7.907  -0.548 -1.179 H10 NDK 37 
NDK H11 H11 H 0 1 N N N -27.701 18.140 -17.225 7.737  1.190  -1.526 H11 NDK 38 
NDK H12 H12 H 0 1 N N N -24.734 22.253 -19.040 3.824  -1.970 -1.302 H12 NDK 39 
NDK H13 H13 H 0 1 N N N -25.512 21.652 -22.407 1.202  0.595  -1.487 H13 NDK 40 
NDK H14 H14 H 0 1 N N N -24.517 22.622 -21.269 1.689  -1.038 -2.002 H14 NDK 41 
NDK H15 H15 H 0 1 N N N -27.038 25.826 -23.142 -0.580 -1.785 1.850  H15 NDK 42 
NDK H16 H16 H 0 1 N N N -27.383 24.947 -24.670 -1.391 -2.886 0.709  H16 NDK 43 
NDK H17 H17 H 0 1 N N N -24.839 26.477 -23.972 -3.094 -1.530 1.832  H17 NDK 44 
NDK H18 H18 H 0 1 N N N -26.102 26.960 -25.154 -2.228 -0.033 1.412  H18 NDK 45 
NDK H19 H19 H 0 1 N N N -25.738 22.645 -24.860 -1.294 -2.025 -1.921 H19 NDK 46 
NDK H20 H20 H 0 1 N N N -24.484 22.710 -23.577 -0.427 -0.481 -2.133 H20 NDK 47 
NDK H21 H21 H 0 1 N N N -28.032 21.256 -21.619 2.675  1.949  -0.060 H21 NDK 48 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
NDK N19 C18 TRIP N N 1  
NDK C18 C17 SING N N 2  
NDK C17 C20 DOUB Y N 3  
NDK C17 N16 SING Y N 4  
NDK C20 C21 SING Y N 5  
NDK N16 N15 DOUB Y N 6  
NDK C21 C14 DOUB Y N 7  
NDK N15 C14 SING Y N 8  
NDK C14 N13 SING N N 9  
NDK N13 C22 SING N N 10 
NDK N13 C12 SING N N 11 
NDK C22 C23 SING N N 12 
NDK C12 C11 SING N N 13 
NDK C23 N10 SING N N 14 
NDK C11 N10 SING N N 15 
NDK N10 C09 SING N N 16 
NDK C09 C08 SING N N 17 
NDK C09 O24 DOUB N N 18 
NDK C08 C07 SING N N 19 
NDK C25 C07 DOUB Y N 20 
NDK C25 C26 SING Y N 21 
NDK C07 C06 SING Y N 22 
NDK F01 C26 SING N N 23 
NDK C26 C04 DOUB Y N 24 
NDK C06 N07 DOUB Y N 25 
NDK C04 N07 SING Y N 26 
NDK C04 C02 SING N N 27 
NDK C03 C02 SING N N 28 
NDK C02 C01 SING N N 29 
NDK C20 H1  SING N N 30 
NDK C21 H2  SING N N 31 
NDK C22 H3  SING N N 32 
NDK C22 H4  SING N N 33 
NDK C01 H5  SING N N 34 
NDK C01 H6  SING N N 35 
NDK C01 H7  SING N N 36 
NDK C02 H8  SING N N 37 
NDK C03 H9  SING N N 38 
NDK C03 H10 SING N N 39 
NDK C03 H11 SING N N 40 
NDK C06 H12 SING N N 41 
NDK C08 H13 SING N N 42 
NDK C08 H14 SING N N 43 
NDK C11 H15 SING N N 44 
NDK C11 H16 SING N N 45 
NDK C12 H17 SING N N 46 
NDK C12 H18 SING N N 47 
NDK C23 H19 SING N N 48 
NDK C23 H20 SING N N 49 
NDK C25 H21 SING N N 50 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
NDK SMILES           ACDLabs              12.01 "O=C(Cc1cc(F)c(nc1)C(C)C)N1CCN(CC1)c1ccc(C#N)nn1"                                                                                    
NDK InChI            InChI                1.03  "InChI=1S/C19H21FN6O/c1-13(2)19-16(20)9-14(12-22-19)10-18(27)26-7-5-25(6-8-26)17-4-3-15(11-21)23-24-17/h3-4,9,12-13H,5-8,10H2,1-2H3" 
NDK InChIKey         InChI                1.03  KVGVKTZXYYUWKQ-UHFFFAOYSA-N                                                                                                          
NDK SMILES_CANONICAL CACTVS               3.385 "CC(C)c1ncc(CC(=O)N2CCN(CC2)c3ccc(nn3)C#N)cc1F"                                                                                      
NDK SMILES           CACTVS               3.385 "CC(C)c1ncc(CC(=O)N2CCN(CC2)c3ccc(nn3)C#N)cc1F"                                                                                      
NDK SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)c1c(cc(cn1)CC(=O)N2CCN(CC2)c3ccc(nn3)C#N)F"                                                                                    
NDK SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)c1c(cc(cn1)CC(=O)N2CCN(CC2)c3ccc(nn3)C#N)F"                                                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
NDK "SYSTEMATIC NAME" ACDLabs              12.01 "6-(4-{[5-fluoro-6-(propan-2-yl)pyridin-3-yl]acetyl}piperazin-1-yl)pyridazine-3-carbonitrile"       
NDK "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "6-[4-[2-(5-fluoranyl-6-propan-2-yl-pyridin-3-yl)ethanoyl]piperazin-1-yl]pyridazine-3-carbonitrile" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
NDK "Create component" 2022-04-01 RCSB 
NDK "Initial release"  2023-04-05 RCSB 
# 
