data_NCK
#

_chem_comp.id                                   NCK
_chem_comp.name                                 "3,6-Bis[3-(4-methylpiperidino)propionamido]acridine"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAD
_chem_comp.formula                              "C31 H41 N5 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        "N,N'-acridine-3,6-diylbis[3-(4-methylpiperidin-1-yl)propanamide]"
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2008-10-06
_chem_comp.pdbx_modified_date                   2021-03-13
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       515.690
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    NCK
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       3ES0
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
NCK  O39   O39   O  0  1  N  N  N  -12.894   2.618  -11.262   -5.475  -1.144   0.736  O39   NCK   1  
NCK  C9    C9    C  0  1  N  N  N  -14.044   2.983  -11.383   -5.326  -0.279  -0.101  C9    NCK   2  
NCK  C10   C10   C  0  1  N  N  N  -14.859   2.544  -12.595   -6.410   0.742  -0.331  C10   NCK   3  
NCK  C13   C13   C  0  1  N  N  N  -13.988   1.857  -13.653   -7.581   0.465   0.614  C13   NCK   4  
NCK  N16   N16   N  0  1  N  N  N  -14.278   0.417  -13.800   -8.637   1.460   0.390  N16   NCK   5  
NCK  C18   C18   C  0  1  N  N  N  -14.149  -0.435  -12.604   -9.670   1.375   1.430  C18   NCK   6  
NCK  C27   C27   C  0  1  N  N  N  -14.606  -1.868  -12.896  -10.674   2.516   1.250  C27   NCK   7  
NCK  C30   C30   C  0  1  N  N  N  -13.917  -2.434  -14.134  -11.312   2.413  -0.139  C30   NCK   8  
NCK  C20   C20   C  0  1  N  N  N  -14.276  -3.896  -14.376  -12.272   3.585  -0.348  C20   NCK   9  
NCK  C33   C33   C  0  1  N  N  N  -14.349  -1.563  -15.299  -10.211   2.456  -1.202  C33   NCK  10  
NCK  C36   C36   C  0  1  N  N  N  -13.885  -0.115  -15.113   -9.221   1.316  -0.950  C36   NCK  11  
NCK  N7    N7    N  0  1  N  N  N  -14.640   3.794  -10.500   -4.188  -0.228  -0.822  N7    NCK  12  
NCK  C6    C6    C  0  1  Y  N  N  -14.105   4.297   -9.288   -3.144  -1.112  -0.542  C6    NCK  13  
NCK  C40   C40   C  0  1  Y  N  N  -14.952   5.047   -8.471   -3.445  -2.420  -0.138  C40   NCK  14  
NCK  C42   C42   C  0  1  Y  N  N  -14.531   5.555   -7.241   -2.467  -3.316   0.146  C42   NCK  15  
NCK  C4    C4    C  0  1  Y  N  N  -12.810   4.037   -8.829   -1.850  -0.682  -0.674  C4    NCK  16  
NCK  C3    C3    C  0  1  Y  N  N  -12.379   4.540   -7.595   -0.791  -1.567  -0.393  C3    NCK  17  
NCK  N1    N1    N  0  1  Y  N  N  -11.114   4.293   -7.168    0.474  -1.174  -0.513  N1    NCK  18  
NCK  C44   C44   C  0  1  Y  N  N  -13.241   5.302   -6.798   -1.114  -2.932   0.034  C44   NCK  19  
NCK  C45   C45   C  0  1  Y  N  N  -12.807   5.795   -5.567   -0.082  -3.829   0.319  C45   NCK  20  
NCK  C2    C2    C  0  1  Y  N  N  -11.503   5.520   -5.148    1.233  -3.376   0.186  C2    NCK  21  
NCK  C87   C87   C  0  1  Y  N  N  -10.658   4.755   -5.977    1.484  -1.999  -0.251  C87   NCK  22  
NCK  C47   C47   C  0  1  Y  N  N  -11.036   5.997   -3.927    2.327  -4.223   0.455  C47   NCK  23  
NCK  C49   C49   C  0  1  Y  N  N   -9.733   5.705   -3.530    3.592  -3.751   0.317  C49   NCK  24  
NCK  C51   C51   C  0  1  Y  N  N   -8.872   4.963   -4.352    3.840  -2.434  -0.090  C51   NCK  25  
NCK  C85   C85   C  0  1  Y  N  N   -9.347   4.466   -5.580    2.819  -1.569  -0.382  C85   NCK  26  
NCK  N52   N52   N  0  1  N  N  N   -7.585   4.652   -3.870    5.160  -1.997  -0.217  N52   NCK  27  
NCK  C54   C54   C  0  1  N  N  N   -6.560   4.098   -4.523    5.483  -0.727   0.097  C54   NCK  28  
NCK  O84   O84   O  0  1  N  N  N   -6.566   3.861   -5.715    4.615   0.059   0.413  O84   NCK  29  
NCK  C55   C55   C  0  1  N  N  N   -5.335   3.790   -3.683    6.923  -0.284   0.058  C55   NCK  30  
NCK  C58   C58   C  0  1  N  N  N   -4.172   3.346   -4.564    7.014   1.191   0.455  C58   NCK  31  
NCK  N61   N61   N  0  1  N  N  N   -3.570   2.083   -4.142    8.417   1.623   0.416  N61   NCK  32  
NCK  C63   C63   C  0  1  N  N  N   -2.882   1.409   -5.242    8.940   1.592  -0.956  C63   NCK  33  
NCK  C66   C66   C  0  1  N  N  N   -2.578  -0.037   -4.866   10.437   1.906  -0.941  C66   NCK  34  
NCK  C69   C69   C  0  1  N  N  N   -1.836  -0.102   -3.535   10.657   3.289  -0.321  C69   NCK  35  
NCK  C77   C77   C  0  1  N  N  N   -1.480  -1.544   -3.175   12.157   3.584  -0.247  C77   NCK  36  
NCK  C72   C72   C  0  1  N  N  N   -2.684   0.566   -2.451   10.062   3.309   1.089  C72   NCK  37  
NCK  C75   C75   C  0  1  N  N  N   -2.996   2.022   -2.793    8.575   2.954   1.015  C75   NCK  38  
NCK  H10   H10   H  0  1  N  N  N  -15.632   1.836  -12.262   -6.016   1.740  -0.138  H10   NCK  39  
NCK  H10A  H10A  H  0  0  N  N  N  -15.305   3.441  -13.050   -6.753   0.681  -1.363  H10A  NCK  40  
NCK  H13   H13   H  0  1  N  N  N  -14.172   2.346  -14.621   -7.975  -0.533   0.420  H13   NCK  41  
NCK  H13A  H13A  H  0  0  N  N  N  -12.941   1.950  -13.328   -7.237   0.526   1.646  H13A  NCK  42  
NCK  H18   H18   H  0  1  N  N  N  -13.095  -0.453  -12.291  -10.188   0.420   1.350  H18   NCK  43  
NCK  H18A  H18A  H  0  0  N  N  N  -14.785  -0.020  -11.808   -9.203   1.454   2.412  H18A  NCK  44  
NCK  H27   H27   H  0  1  N  N  N  -14.359  -2.502  -12.032  -11.448   2.444   2.013  H27   NCK  45  
NCK  H27A  H27A  H  0  0  N  N  N  -15.691  -1.855  -13.079  -10.158   3.472   1.344  H27A  NCK  46  
NCK  H30   H30   H  0  1  N  N  N  -12.825  -2.418  -14.005  -11.859   1.474  -0.219  H30   NCK  47  
NCK  H20   H20   H  0  1  N  N  N  -14.362  -4.079  -15.457  -11.723   4.524  -0.270  H20   NCK  48  
NCK  H20A  H20A  H  0  0  N  N  N  -13.489  -4.541  -13.957  -12.726   3.511  -1.336  H20A  NCK  49  
NCK  H20B  H20B  H  0  0  N  N  N  -15.235  -4.123  -13.888  -13.052   3.556   0.413  H20B  NCK  50  
NCK  H33   H33   H  0  1  N  N  N  -13.908  -1.962  -16.224  -10.655   2.340  -2.191  H33   NCK  51  
NCK  H33A  H33A  H  0  0  N  N  N  -15.448  -1.573  -15.352   -9.689   3.411  -1.147  H33A  NCK  52  
NCK  H36   H36   H  0  1  N  N  N  -14.342   0.506  -15.897   -8.428   1.353  -1.697  H36   NCK  53  
NCK  H36A  H36A  H  0  0  N  N  N  -12.787  -0.094  -15.178   -9.741   0.361  -1.019  H36A  NCK  54  
NCK  HN7   HN7   H  0  1  N  N  N  -15.573   4.078  -10.722   -4.094   0.423  -1.535  HN7   NCK  55  
NCK  H40   H40   H  0  1  N  N  N  -15.962   5.240   -8.800   -4.478  -2.720  -0.050  H40   NCK  56  
NCK  H42   H42   H  0  1  N  N  N  -15.207   6.142   -6.637   -2.723  -4.318   0.456  H42   NCK  57  
NCK  H4    H4    H  0  1  N  N  N  -12.137   3.444   -9.431   -1.643   0.330  -0.991  H4    NCK  58  
NCK  H45   H45   H  0  1  N  N  N  -13.470   6.381   -4.947   -0.294  -4.841   0.632  H45   NCK  59  
NCK  H47   H47   H  0  1  N  N  N  -11.679   6.589   -3.292    2.160  -5.243   0.771  H47   NCK  60  
NCK  H49   H49   H  0  1  N  N  N   -9.379   6.056   -2.572    4.425  -4.406   0.525  H49   NCK  61  
NCK  H85   H85   H  0  1  N  N  N   -8.706   3.867   -6.210    3.036  -0.559  -0.699  H85   NCK  62  
NCK  HN52  HN52  H  0  0  N  N  N   -7.416   4.876   -2.910    5.845  -2.608  -0.531  HN52  NCK  63  
NCK  H55   H55   H  0  1  N  N  N   -5.042   4.695   -3.131    7.508  -0.885   0.755  H55   NCK  64  
NCK  H55A  H55A  H  0  0  N  N  N   -5.581   2.976   -2.985    7.315  -0.414  -0.951  H55A  NCK  65  
NCK  H58   H58   H  0  1  N  N  N   -4.548   3.220   -5.590    6.429   1.791  -0.242  H58   NCK  66  
NCK  H58A  H58A  H  0  0  N  N  N   -3.393   4.119   -4.489    6.622   1.320   1.464  H58A  NCK  67  
NCK  H63   H63   H  0  1  N  N  N   -3.525   1.424   -6.135    8.781   0.602  -1.383  H63   NCK  68  
NCK  H63A  H63A  H  0  0  N  N  N   -1.937   1.933   -5.449    8.419   2.336  -1.559  H63A  NCK  69  
NCK  H66   H66   H  0  1  N  N  N   -3.524  -0.592   -4.778   10.960   1.155  -0.349  H66   NCK  70  
NCK  H66A  H66A  H  0  0  N  N  N   -1.944  -0.481   -5.648   10.821   1.899  -1.961  H66A  NCK  71  
NCK  H69   H69   H  0  1  N  N  N   -0.885   0.444   -3.619   10.168   4.045  -0.935  H69   NCK  72  
NCK  H77   H77   H  0  1  N  N  N   -1.394  -2.142   -4.095   12.581   3.564  -1.251  H77   NCK  73  
NCK  H77A  H77A  H  0  0  N  N  N   -0.521  -1.561   -2.636   12.313   4.568   0.194  H77A  NCK  74  
NCK  H77B  H77B  H  0  0  N  N  N   -2.268  -1.967   -2.535   12.645   2.828   0.369  H77B  NCK  75  
NCK  H72   H72   H  0  1  N  N  N   -3.631   0.015   -2.355   10.579   2.580   1.713  H72   NCK  76  
NCK  H72A  H72A  H  0  0  N  N  N   -2.115   0.549   -1.510   10.178   4.304   1.519  H72A  NCK  77  
NCK  H75   H75   H  0  1  N  N  N   -2.071   2.616   -2.758    8.056   3.692   0.402  H75   NCK  78  
NCK  H75A  H75A  H  0  0  N  N  N   -3.713   2.429   -2.065    8.151   2.954   2.019  H75A  NCK  79  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
NCK  C9   O39   DOUB  N  N   1  
NCK  C10  C9    SING  N  N   2  
NCK  C9   N7    SING  N  N   3  
NCK  C13  C10   SING  N  N   4  
NCK  C10  H10   SING  N  N   5  
NCK  C10  H10A  SING  N  N   6  
NCK  N16  C13   SING  N  N   7  
NCK  C13  H13   SING  N  N   8  
NCK  C13  H13A  SING  N  N   9  
NCK  C36  N16   SING  N  N  10  
NCK  N16  C18   SING  N  N  11  
NCK  C27  C18   SING  N  N  12  
NCK  C18  H18   SING  N  N  13  
NCK  C18  H18A  SING  N  N  14  
NCK  C30  C27   SING  N  N  15  
NCK  C27  H27   SING  N  N  16  
NCK  C27  H27A  SING  N  N  17  
NCK  C33  C30   SING  N  N  18  
NCK  C20  C30   SING  N  N  19  
NCK  C30  H30   SING  N  N  20  
NCK  C20  H20   SING  N  N  21  
NCK  C20  H20A  SING  N  N  22  
NCK  C20  H20B  SING  N  N  23  
NCK  C33  C36   SING  N  N  24  
NCK  C33  H33   SING  N  N  25  
NCK  C33  H33A  SING  N  N  26  
NCK  C36  H36   SING  N  N  27  
NCK  C36  H36A  SING  N  N  28  
NCK  N7   C6    SING  N  N  29  
NCK  N7   HN7   SING  N  N  30  
NCK  C6   C4    DOUB  Y  N  31  
NCK  C6   C40   SING  Y  N  32  
NCK  C40  C42   DOUB  Y  N  33  
NCK  C40  H40   SING  N  N  34  
NCK  C42  C44   SING  Y  N  35  
NCK  C42  H42   SING  N  N  36  
NCK  C4   C3    SING  Y  N  37  
NCK  C4   H4    SING  N  N  38  
NCK  C3   N1    DOUB  Y  N  39  
NCK  C3   C44   SING  Y  N  40  
NCK  N1   C87   SING  Y  N  41  
NCK  C44  C45   DOUB  Y  N  42  
NCK  C45  C2    SING  Y  N  43  
NCK  C45  H45   SING  N  N  44  
NCK  C87  C2    SING  Y  N  45  
NCK  C2   C47   DOUB  Y  N  46  
NCK  C87  C85   DOUB  Y  N  47  
NCK  C47  C49   SING  Y  N  48  
NCK  C47  H47   SING  N  N  49  
NCK  C51  C49   DOUB  Y  N  50  
NCK  C49  H49   SING  N  N  51  
NCK  C85  C51   SING  Y  N  52  
NCK  C51  N52   SING  N  N  53  
NCK  C85  H85   SING  N  N  54  
NCK  C54  N52   SING  N  N  55  
NCK  N52  HN52  SING  N  N  56  
NCK  O84  C54   DOUB  N  N  57  
NCK  C54  C55   SING  N  N  58  
NCK  C58  C55   SING  N  N  59  
NCK  C55  H55   SING  N  N  60  
NCK  C55  H55A  SING  N  N  61  
NCK  C58  N61   SING  N  N  62  
NCK  C58  H58   SING  N  N  63  
NCK  C58  H58A  SING  N  N  64  
NCK  C63  N61   SING  N  N  65  
NCK  N61  C75   SING  N  N  66  
NCK  C63  C66   SING  N  N  67  
NCK  C63  H63   SING  N  N  68  
NCK  C63  H63A  SING  N  N  69  
NCK  C66  C69   SING  N  N  70  
NCK  C66  H66   SING  N  N  71  
NCK  C66  H66A  SING  N  N  72  
NCK  C69  C77   SING  N  N  73  
NCK  C69  C72   SING  N  N  74  
NCK  C69  H69   SING  N  N  75  
NCK  C77  H77   SING  N  N  76  
NCK  C77  H77A  SING  N  N  77  
NCK  C77  H77B  SING  N  N  78  
NCK  C75  C72   SING  N  N  79  
NCK  C72  H72   SING  N  N  80  
NCK  C72  H72A  SING  N  N  81  
NCK  C75  H75   SING  N  N  82  
NCK  C75  H75A  SING  N  N  83  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
NCK  SMILES            ACDLabs               10.04  "O=C(Nc3cc2nc1cc(ccc1cc2cc3)NC(=O)CCN4CCC(CC4)C)CCN5CCC(C)CC5"  
NCK  SMILES_CANONICAL  CACTVS                3.341  "CC1CCN(CC1)CCC(=O)Nc2ccc3cc4ccc(NC(=O)CCN5CCC(C)CC5)cc4nc3c2"  
NCK  SMILES            CACTVS                3.341  "CC1CCN(CC1)CCC(=O)Nc2ccc3cc4ccc(NC(=O)CCN5CCC(C)CC5)cc4nc3c2"  
NCK  SMILES_CANONICAL  "OpenEye OEToolkits"  1.5.0  "CC1CCN(CC1)CCC(=O)Nc2ccc3cc4ccc(cc4nc3c2)NC(=O)CCN5CCC(CC5)C"  
NCK  SMILES            "OpenEye OEToolkits"  1.5.0  "CC1CCN(CC1)CCC(=O)Nc2ccc3cc4ccc(cc4nc3c2)NC(=O)CCN5CCC(CC5)C"  
NCK  InChI             InChI                 1.03   "InChI=1S/C31H41N5O2/c1-22-7-13-35(14-8-22)17-11-30(37)32-26-5-3-24-19-25-4-6-27(21-29(25)34-28(24)20-26)33-31(38)12-18-36-15-9-23(2)10-16-36/h3-6,19-23H,7-18H2,1-2H3,(H,32,37)(H,33,38)"  
NCK  InChIKey          InChI                 1.03   BQDBDQOPOGFTHF-UHFFFAOYSA-N  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
NCK  "SYSTEMATIC NAME"  ACDLabs               10.04  "N,N'-acridine-3,6-diylbis[3-(4-methylpiperidin-1-yl)propanamide]"  
NCK  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  1.5.0  "3-(4-methylpiperidin-1-yl)-N-[6-[3-(4-methylpiperidin-1-yl)propanoylamino]acridin-3-yl]propanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
NCK  "Create component"      2008-10-06  RCSB  
NCK  "Modify aromatic_flag"  2011-06-04  RCSB  
NCK  "Modify descriptor"     2011-06-04  RCSB  
NCK  "Modify synonyms"       2021-03-13  RCSB  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     NCK
_pdbx_chem_comp_synonyms.name        "N,N'-acridine-3,6-diylbis[3-(4-methylpiperidin-1-yl)propanamide]"
_pdbx_chem_comp_synonyms.provenance  PDB
_pdbx_chem_comp_synonyms.type        ?
##
