data_N7K
# 
_chem_comp.id                                    N7K 
_chem_comp.name                                  "~{N}-[3-[4-[[1-(phenylmethyl)indazol-5-yl]amino]-7~{H}-pyrrolo[2,3-d]pyrimidin-5-yl]phenyl]propanamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C29 H25 N7 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2019-11-14 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        487.555 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     N7K 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6TFU 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
N7K C4  C1  C 0 1 Y N N N N N -42.179 11.711 -1.681 -2.901 3.674  -0.235 C4  N7K 1  
N7K C5  C2  C 0 1 Y N N N N N -43.384 11.103 -1.498 -2.354 2.382  -0.332 C5  N7K 2  
N7K C6  C3  C 0 1 Y N N N N N -43.410 9.748  -1.376 -1.026 2.181  0.067  C6  N7K 3  
N7K N1  N1  N 0 1 Y N N N N N -42.260 9.043  -1.435 -0.338 3.226  0.521  N1  N7K 4  
N7K N3  N2  N 0 1 Y N N N N N -41.027 11.032 -1.736 -2.132 4.657  0.232  N3  N7K 5  
N7K C2  C4  C 0 1 Y N N N N N -41.031 9.661  -1.613 -0.890 4.423  0.595  C2  N7K 6  
N7K CAL C5  C 0 1 Y N N N N N -43.638 13.279 -1.671 -4.499 2.326  -1.056 CAL N7K 7  
N7K CAM C6  C 0 1 Y N N N N N -44.285 12.123 -1.501 -3.419 1.526  -0.869 CAM N7K 8  
N7K CAN C7  C 0 1 Y N N N N N -45.632 12.141 -1.355 -3.330 0.075  -1.157 CAN N7K 9  
N7K CAO C8  C 0 1 Y N N N N N -46.427 12.906 -2.222 -4.313 -0.793 -0.685 CAO N7K 10 
N7K CAP C9  C 0 1 Y N N N N N -47.823 12.970 -2.087 -4.224 -2.149 -0.959 CAP N7K 11 
N7K CAQ C10 C 0 1 Y N N N N N -48.449 12.271 -1.061 -3.157 -2.639 -1.701 CAQ N7K 12 
N7K CAR C11 C 0 1 Y N N N N N -47.670 11.525 -0.184 -2.182 -1.778 -2.169 CAR N7K 13 
N7K CAS C12 C 0 1 Y N N N N N -46.280 11.471 -0.324 -2.266 -0.425 -1.906 CAS N7K 14 
N7K CAT C13 C 0 1 N N N N N N -49.190 13.010 -3.928 -5.779 -2.811 0.716  CAT N7K 15 
N7K CAU C14 C 0 1 Y N N N N N -44.253 1.002  -3.332 7.526  -1.093 -0.132 CAU N7K 16 
N7K CAV C15 C 0 1 Y N N N N N -43.913 1.951  -2.368 6.351  -1.392 0.533  CAV N7K 17 
N7K CAW C16 C 0 1 Y N N N N N -42.584 2.359  -2.276 5.642  -2.532 0.205  CAW N7K 18 
N7K CAX C17 C 0 1 Y N N N N N -41.607 1.835  -3.121 6.108  -3.373 -0.789 CAX N7K 19 
N7K CAY C18 C 0 1 Y N N N N N -41.952 0.889  -4.076 7.282  -3.074 -1.453 CAY N7K 20 
N7K CAZ C19 C 0 1 Y N N N N N -43.279 0.477  -4.181 7.988  -1.931 -1.129 CAZ N7K 21 
N7K CBA C20 C 0 1 N N N N N N -44.903 2.480  -1.510 5.844  -0.475 1.616  CBA N7K 22 
N7K CBB C21 C 0 1 Y N N N N N -44.575 4.949  -1.068 3.608  0.417  0.863  CBB N7K 23 
N7K CBC C22 C 0 1 Y N N N N N -43.929 5.678  -0.156 3.164  1.611  0.264  CBC N7K 24 
N7K CBD C23 C 0 1 Y N N N N N -43.354 4.824  0.689  4.349  2.445  0.085  CBD N7K 25 
N7K CBE C24 C 0 1 Y N N N N N -45.249 5.566  -2.052 2.690  -0.590 1.155  CBE N7K 26 
N7K CBF C25 C 0 1 Y N N N N N -45.283 6.969  -2.131 1.367  -0.414 0.867  CBF N7K 27 
N7K CBG C26 C 0 1 Y N N N N N -44.603 7.733  -1.178 0.916  0.768  0.278  CBG N7K 28 
N7K CBH C27 C 0 1 Y N N N N N -43.939 7.013  -0.184 1.806  1.778  -0.028 CBH N7K 29 
N7K CBI C28 C 0 1 N N N N N N -50.054 13.836 -4.881 -6.761 -3.810 1.272  CBI N7K 30 
N7K CBJ C29 C 0 1 N N N N N N -49.690 13.397 -6.308 -7.255 -3.333 2.639  CBJ N7K 31 
N7K NAC N3  N 0 1 Y N N N N N -42.337 13.019 -1.782 -4.196 3.604  -0.675 NAC N7K 32 
N7K NAD N4  N 0 1 N N N N N N -48.587 13.682 -2.927 -5.209 -3.024 -0.486 NAD N7K 33 
N7K NAE N5  N 0 1 Y N N N N N -44.371 3.656  -0.754 4.965  0.538  1.027  NAE N7K 34 
N7K NAF N6  N 0 1 Y N N N N N -43.650 3.585  0.297  5.374  1.784  0.541  NAF N7K 35 
N7K NAG N7  N 0 1 N N N N N N -44.590 9.102  -1.196 -0.445 0.927  -0.010 NAG N7K 36 
N7K OBK O1  O 0 1 N N N N N N -49.033 11.808 -4.140 -5.501 -1.816 1.351  OBK N7K 37 
N7K H1  H1  H 0 1 N N N N N N -40.115 9.090  -1.653 -0.296 5.244  0.970  H1  N7K 38 
N7K H2  H2  H 0 1 N N N N N N -44.093 14.258 -1.712 -5.454 2.002  -1.443 H2  N7K 39 
N7K H3  H3  H 0 1 N N N N N N -45.951 13.462 -3.016 -5.142 -0.410 -0.108 H3  N7K 40 
N7K H4  H4  H 0 1 N N N N N N -49.522 12.307 -0.947 -3.088 -3.696 -1.913 H4  N7K 41 
N7K H5  H5  H 0 1 N N N N N N -48.146 10.979 0.617  -1.354 -2.164 -2.746 H5  N7K 42 
N7K H6  H6  H 0 1 N N N N N N -45.698 10.898 0.383  -1.505 0.245  -2.277 H6  N7K 43 
N7K H7  H7  H 0 1 N N N N N N -45.277 0.672  -3.422 8.080  -0.202 0.125  H7  N7K 44 
N7K H8  H8  H 0 1 N N N N N N -42.306 3.095  -1.536 4.725  -2.766 0.724  H8  N7K 45 
N7K H9  H9  H 0 1 N N N N N N -40.582 2.165  -3.033 5.554  -4.264 -1.045 H9  N7K 46 
N7K H10 H10 H 0 1 N N N N N N -41.199 0.476  -4.731 7.646  -3.732 -2.229 H10 N7K 47 
N7K H11 H11 H 0 1 N N N N N N -43.555 -0.255 -4.926 8.906  -1.697 -1.648 H11 N7K 48 
N7K H12 H12 H 0 1 N N N N N N -45.769 2.797  -2.110 5.287  -1.055 2.352  H12 N7K 49 
N7K H13 H13 H 0 1 N N N N N N -45.216 1.703  -0.797 6.688  0.015  2.102  H13 N7K 50 
N7K H14 H14 H 0 1 N N N N N N -42.751 5.090  1.545  4.371  3.434  -0.350 H14 N7K 51 
N7K H15 H15 H 0 1 N N N N N N -45.771 4.977  -2.792 3.025  -1.510 1.610  H15 N7K 52 
N7K H16 H16 H 0 1 N N N N N N -45.832 7.455  -2.924 0.662  -1.199 1.097  H16 N7K 53 
N7K H17 H17 H 0 1 N N N N N N -43.415 7.554  0.590  1.456  2.693  -0.483 H17 N7K 54 
N7K H18 H18 H 0 1 N N N N N N -49.844 14.908 -4.750 -7.608 -3.904 0.592  H18 N7K 55 
N7K H19 H19 H 0 1 N N N N N N -51.120 13.645 -4.687 -6.272 -4.778 1.380  H19 N7K 56 
N7K H20 H20 H 0 1 N N N N N N -50.290 13.968 -7.032 -7.965 -4.055 3.041  H20 N7K 57 
N7K H21 H21 H 0 1 N N N N N N -48.621 13.586 -6.488 -6.408 -3.239 3.319  H21 N7K 58 
N7K H22 H22 H 0 1 N N N N N N -49.898 12.323 -6.425 -7.744 -2.364 2.532  H22 N7K 59 
N7K H23 H23 H 0 1 N N N N N N -41.610 13.692 -1.917 -4.809 4.355  -0.715 H23 N7K 60 
N7K H24 H24 H 0 1 N N N N N N -48.705 14.669 -2.816 -5.481 -3.783 -1.024 H24 N7K 61 
N7K H25 H25 H 0 1 N N N N N N -45.438 9.619  -1.078 -0.980 0.159  -0.263 H25 N7K 62 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
N7K CBJ CBI SING N N 1  
N7K CBI CAT SING N N 2  
N7K CAZ CAY DOUB Y N 3  
N7K CAZ CAU SING Y N 4  
N7K OBK CAT DOUB N N 5  
N7K CAY CAX SING Y N 6  
N7K CAT NAD SING N N 7  
N7K CAU CAV DOUB Y N 8  
N7K CAX CAW DOUB Y N 9  
N7K NAD CAP SING N N 10 
N7K CAV CAW SING Y N 11 
N7K CAV CBA SING N N 12 
N7K CAO CAP DOUB Y N 13 
N7K CAO CAN SING Y N 14 
N7K CBF CBE DOUB Y N 15 
N7K CBF CBG SING Y N 16 
N7K CAP CAQ SING Y N 17 
N7K CBE CBB SING Y N 18 
N7K NAC C4  SING Y N 19 
N7K NAC CAL SING Y N 20 
N7K N3  C4  DOUB Y N 21 
N7K N3  C2  SING Y N 22 
N7K C4  C5  SING Y N 23 
N7K CAL CAM DOUB Y N 24 
N7K C2  N1  DOUB Y N 25 
N7K CBA NAE SING N N 26 
N7K CAM C5  SING Y N 27 
N7K CAM CAN SING N N 28 
N7K C5  C6  DOUB Y N 29 
N7K N1  C6  SING Y N 30 
N7K C6  NAG SING N N 31 
N7K CAN CAS DOUB Y N 32 
N7K NAG CBG SING N N 33 
N7K CBG CBH DOUB Y N 34 
N7K CBB NAE SING Y N 35 
N7K CBB CBC DOUB Y N 36 
N7K CAQ CAR DOUB Y N 37 
N7K NAE NAF SING Y N 38 
N7K CAS CAR SING Y N 39 
N7K CBH CBC SING Y N 40 
N7K CBC CBD SING Y N 41 
N7K NAF CBD DOUB Y N 42 
N7K C2  H1  SING N N 43 
N7K CAL H2  SING N N 44 
N7K CAO H3  SING N N 45 
N7K CAQ H4  SING N N 46 
N7K CAR H5  SING N N 47 
N7K CAS H6  SING N N 48 
N7K CAU H7  SING N N 49 
N7K CAW H8  SING N N 50 
N7K CAX H9  SING N N 51 
N7K CAY H10 SING N N 52 
N7K CAZ H11 SING N N 53 
N7K CBA H12 SING N N 54 
N7K CBA H13 SING N N 55 
N7K CBD H14 SING N N 56 
N7K CBE H15 SING N N 57 
N7K CBF H16 SING N N 58 
N7K CBH H17 SING N N 59 
N7K CBI H18 SING N N 60 
N7K CBI H19 SING N N 61 
N7K CBJ H20 SING N N 62 
N7K CBJ H21 SING N N 63 
N7K CBJ H22 SING N N 64 
N7K NAC H23 SING N N 65 
N7K NAD H24 SING N N 66 
N7K NAG H25 SING N N 67 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
N7K InChI            InChI                1.03  "InChI=1S/C29H25N7O/c1-2-26(37)34-22-10-6-9-20(13-22)24-16-30-28-27(24)29(32-18-31-28)35-23-11-12-25-21(14-23)15-33-36(25)17-19-7-4-3-5-8-19/h3-16,18H,2,17H2,1H3,(H,34,37)(H2,30,31,32,35)" 
N7K InChIKey         InChI                1.03  OAEKXBTZBOTUIT-UHFFFAOYSA-N                                                                                                                                                                  
N7K SMILES_CANONICAL CACTVS               3.385 "CCC(=O)Nc1cccc(c1)c2c[nH]c3ncnc(Nc4ccc5n(Cc6ccccc6)ncc5c4)c23"                                                                                                                              
N7K SMILES           CACTVS               3.385 "CCC(=O)Nc1cccc(c1)c2c[nH]c3ncnc(Nc4ccc5n(Cc6ccccc6)ncc5c4)c23"                                                                                                                              
N7K SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCC(=O)Nc1cccc(c1)c2c[nH]c3c2c(ncn3)Nc4ccc5c(c4)cnn5Cc6ccccc6"                                                                                                                              
N7K SMILES           "OpenEye OEToolkits" 2.0.7 "CCC(=O)Nc1cccc(c1)c2c[nH]c3c2c(ncn3)Nc4ccc5c(c4)cnn5Cc6ccccc6"                                                                                                                              
# 
_pdbx_chem_comp_identifier.comp_id           N7K 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{N}-[3-[4-[[1-(phenylmethyl)indazol-5-yl]amino]-7~{H}-pyrrolo[2,3-d]pyrimidin-5-yl]phenyl]propanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
N7K "Create component" 2019-11-14 PDBE 
N7K "Initial release"  2020-09-30 RCSB 
N7K "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            N7K 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               CBJ 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
