data_L1K
#

_chem_comp.id                                   L1K
_chem_comp.name                                 "~{N}-[1-(2-methyl-2-oxidanyl-propyl)benzimidazol-2-yl]-2-phenyl-pyridine-4-carboxamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C23 H22 N4 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-07-12
_chem_comp.pdbx_modified_date                   2019-11-15
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       386.446
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    L1K
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6S9C
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
L1K  C1   C1   C  0  1  N  N  N  -18.616  -48.138  -1.563   2.368  -2.293   1.305  C1   L1K   1  
L1K  C2   C2   C  0  1  N  N  N  -19.526  -49.258  -2.093   3.660  -2.374   0.489  C2   L1K   2  
L1K  C3   C3   C  0  1  N  N  N  -20.822  -48.617  -2.637   3.966  -3.838   0.164  C3   L1K   3  
L1K  C5   C4   C  0  1  N  N  N  -19.968  -50.330  -1.079   3.492  -1.587  -0.812  C5   L1K   4  
L1K  C7   C5   C  0  1  Y  N  N  -17.801  -50.923   0.382   4.126   0.828  -0.328  C7   L1K   5  
L1K  C8   C6   C  0  1  Y  N  N  -16.644  -50.191   0.066   5.510   0.886  -0.385  C8   L1K   6  
L1K  C11  C7   C  0  1  Y  N  N  -16.477  -52.065   2.106   4.057   3.195   0.174  C11  L1K   7  
L1K  C12  C8   C  0  1  Y  N  N  -17.689  -51.874   1.427   3.386   1.989  -0.047  C12  L1K   8  
L1K  N13  N1   N  0  1  Y  N  N  -18.887  -52.470   1.580   2.074   1.639  -0.055  N13  L1K   9  
L1K  C16  C9   C  0  1  N  N  N  -21.752  -53.289   1.341  -0.400   0.313  -0.201  C16  L1K  10  
L1K  C18  C10  C  0  1  Y  N  N  -23.185  -53.589   0.998  -1.679  -0.428  -0.288  C18  L1K  11  
L1K  C19  C11  C  0  1  Y  N  N  -23.828  -54.709   1.555  -1.698  -1.797  -0.576  C19  L1K  12  
L1K  C23  C12  C  0  1  Y  N  N  -23.922  -52.864   0.032  -2.899   0.220  -0.080  C23  L1K  13  
L1K  C24  C13  C  0  1  Y  N  N  -26.037  -52.439  -1.326  -5.382   0.154   0.046  C24  L1K  14  
L1K  C27  C14  C  0  1  Y  N  N  -27.555  -51.033  -3.242  -7.817   1.407   0.452  C27  L1K  15  
L1K  O4   O1   O  0  1  N  N  N  -18.884  -49.928  -3.180   4.737  -1.819   1.247  O4   L1K  16  
L1K  N6   N2   N  0  1  Y  N  N  -19.136  -51.012  -0.053   3.199  -0.186  -0.500  N6   L1K  17  
L1K  C9   C15  C  0  1  Y  N  N  -15.450  -50.391   0.739   6.157   2.085  -0.166  C9   L1K  18  
L1K  C10  C16  C  0  1  Y  N  N  -15.365  -51.327   1.761   5.432   3.234   0.113  C10  L1K  19  
L1K  C14  C17  C  0  1  Y  N  N  -19.738  -51.981   0.728   1.962   0.362  -0.318  C14  L1K  20  
L1K  N15  N3   N  0  1  N  N  N  -21.076  -52.367   0.602   0.767  -0.331  -0.400  N15  L1K  21  
L1K  O17  O2   O  0  1  N  N  N  -21.181  -53.935   2.207  -0.403   1.502   0.050  O17  L1K  22  
L1K  C20  C18  C  0  1  Y  N  N  -25.133  -55.012   1.190  -2.911  -2.455  -0.649  C20  L1K  23  
L1K  N21  N4   N  0  1  Y  N  N  -25.782  -54.287   0.292  -4.044  -1.813  -0.453  N21  L1K  24  
L1K  C22  C19  C  0  1  Y  N  N  -25.243  -53.218  -0.305  -4.077  -0.517  -0.172  C22  L1K  25  
L1K  C25  C20  C  0  1  Y  N  N  -25.438  -51.495  -2.197  -6.567  -0.574  -0.044  C25  L1K  26  
L1K  C26  C21  C  0  1  Y  N  N  -26.193  -50.803  -3.132  -7.778   0.056   0.159  C26  L1K  27  
L1K  C28  C22  C  0  1  Y  N  N  -28.163  -51.959  -2.409  -6.644   2.134   0.548  C28  L1K  28  
L1K  C29  C23  C  0  1  Y  N  N  -27.423  -52.658  -1.469  -5.427   1.514   0.346  C29  L1K  29  
L1K  H1   H1   H  0  1  N  N  N  -19.114  -47.625  -0.727   1.546  -2.716   0.728  H1   L1K  30  
L1K  H2   H2   H  0  1  N  N  N  -17.667  -48.571  -1.214   2.487  -2.853   2.232  H2   L1K  31  
L1K  H3   H3   H  0  1  N  N  N  -18.416  -47.416  -2.369   2.150  -1.250   1.537  H3   L1K  32  
L1K  H4   H4   H  0  1  N  N  N  -21.342  -48.092  -1.822   3.144  -4.261  -0.413  H4   L1K  33  
L1K  H5   H5   H  0  1  N  N  N  -20.571  -47.901  -3.433   4.886  -3.896  -0.417  H5   L1K  34  
L1K  H6   H6   H  0  1  N  N  N  -21.477  -49.402  -3.043   4.085  -4.399   1.091  H6   L1K  35  
L1K  H7   H7   H  0  1  N  N  N  -20.782  -49.857  -0.510   4.412  -1.645  -1.393  H7   L1K  36  
L1K  H8   H8   H  0  1  N  N  N  -20.376  -51.145  -1.694   2.670  -2.010  -1.389  H8   L1K  37  
L1K  H9   H9   H  0  1  N  N  N  -16.687  -49.454  -0.722   6.080  -0.005  -0.601  H9   L1K  38  
L1K  H10  H10  H  0  1  N  N  N  -16.415  -52.793   2.902   3.498   4.093   0.391  H10  L1K  39  
L1K  H11  H11  H  0  1  N  N  N  -23.307  -55.333   2.266  -0.775  -2.334  -0.739  H11  L1K  40  
L1K  H12  H12  H  0  1  N  N  N  -23.461  -52.019  -0.458  -2.928   1.275   0.149  H12  L1K  41  
L1K  H13  H13  H  0  1  N  N  N  -28.140  -50.494  -3.973  -8.767   1.896   0.610  H13  L1K  42  
L1K  H14  H14  H  0  1  N  N  N  -18.081  -50.333  -2.873   5.589  -1.838   0.790  H14  L1K  43  
L1K  H15  H15  H  0  1  N  N  N  -14.578  -49.814   0.467   7.235   2.128  -0.211  H15  L1K  44  
L1K  H16  H16  H  0  1  N  N  N  -14.432  -51.476   2.283   5.950   4.166   0.283  H16  L1K  45  
L1K  H17  H17  H  0  1  N  N  N  -21.599  -51.911  -0.118   0.769  -1.280  -0.600  H17  L1K  46  
L1K  H18  H18  H  0  1  N  N  N  -25.628  -55.856   1.648  -2.931  -3.512  -0.871  H18  L1K  47  
L1K  H19  H19  H  0  1  N  N  N  -24.376  -51.311  -2.131  -6.537  -1.629  -0.273  H19  L1K  48  
L1K  H20  H20  H  0  1  N  N  N  -25.717  -50.081  -3.778  -8.696  -0.508   0.090  H20  L1K  49  
L1K  H21  H21  H  0  1  N  N  N  -29.225  -52.138  -2.494  -6.680   3.189   0.776  H21  L1K  50  
L1K  H22  H22  H  0  1  N  N  N  -27.915  -53.382  -0.836  -4.512   2.082   0.422  H22  L1K  51  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
L1K  C27  C26  DOUB  Y  N   1  
L1K  C27  C28  SING  Y  N   2  
L1K  O4   C2   SING  N  N   3  
L1K  C26  C25  SING  Y  N   4  
L1K  C3   C2   SING  N  N   5  
L1K  C28  C29  DOUB  Y  N   6  
L1K  C25  C24  DOUB  Y  N   7  
L1K  C2   C1   SING  N  N   8  
L1K  C2   C5   SING  N  N   9  
L1K  C29  C24  SING  Y  N  10  
L1K  C24  C22  SING  N  N  11  
L1K  C5   N6   SING  N  N  12  
L1K  C22  C23  DOUB  Y  N  13  
L1K  C22  N21  SING  Y  N  14  
L1K  N6   C7   SING  Y  N  15  
L1K  N6   C14  SING  Y  N  16  
L1K  C23  C18  SING  Y  N  17  
L1K  C8   C7   DOUB  Y  N  18  
L1K  C8   C9   SING  Y  N  19  
L1K  N21  C20  DOUB  Y  N  20  
L1K  C7   C12  SING  Y  N  21  
L1K  N15  C14  SING  N  N  22  
L1K  N15  C16  SING  N  N  23  
L1K  C14  N13  DOUB  Y  N  24  
L1K  C9   C10  DOUB  Y  N  25  
L1K  C18  C16  SING  N  N  26  
L1K  C18  C19  DOUB  Y  N  27  
L1K  C20  C19  SING  Y  N  28  
L1K  C16  O17  DOUB  N  N  29  
L1K  C12  N13  SING  Y  N  30  
L1K  C12  C11  DOUB  Y  N  31  
L1K  C10  C11  SING  Y  N  32  
L1K  C1   H1   SING  N  N  33  
L1K  C1   H2   SING  N  N  34  
L1K  C1   H3   SING  N  N  35  
L1K  C3   H4   SING  N  N  36  
L1K  C3   H5   SING  N  N  37  
L1K  C3   H6   SING  N  N  38  
L1K  C5   H7   SING  N  N  39  
L1K  C5   H8   SING  N  N  40  
L1K  C8   H9   SING  N  N  41  
L1K  C11  H10  SING  N  N  42  
L1K  C19  H11  SING  N  N  43  
L1K  C23  H12  SING  N  N  44  
L1K  C27  H13  SING  N  N  45  
L1K  O4   H14  SING  N  N  46  
L1K  C9   H15  SING  N  N  47  
L1K  C10  H16  SING  N  N  48  
L1K  N15  H17  SING  N  N  49  
L1K  C20  H18  SING  N  N  50  
L1K  C25  H19  SING  N  N  51  
L1K  C26  H20  SING  N  N  52  
L1K  C28  H21  SING  N  N  53  
L1K  C29  H22  SING  N  N  54  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
L1K  InChI             InChI                 1.03   "InChI=1S/C23H22N4O2/c1-23(2,29)15-27-20-11-7-6-10-18(20)25-22(27)26-21(28)17-12-13-24-19(14-17)16-8-4-3-5-9-16/h3-14,29H,15H2,1-2H3,(H,25,26,28)"  
L1K  InChIKey          InChI                 1.03   UDMIRQWCOXFLHS-UHFFFAOYSA-N  
L1K  SMILES_CANONICAL  CACTVS                3.385  "CC(C)(O)Cn1c(NC(=O)c2ccnc(c2)c3ccccc3)nc4ccccc14"  
L1K  SMILES            CACTVS                3.385  "CC(C)(O)Cn1c(NC(=O)c2ccnc(c2)c3ccccc3)nc4ccccc14"  
L1K  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CC(C)(Cn1c2ccccc2nc1NC(=O)c3ccnc(c3)c4ccccc4)O"  
L1K  SMILES            "OpenEye OEToolkits"  2.0.7  "CC(C)(Cn1c2ccccc2nc1NC(=O)c3ccnc(c3)c4ccccc4)O"  
#
_pdbx_chem_comp_identifier.comp_id          L1K
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "~{N}-[1-(2-methyl-2-oxidanyl-propyl)benzimidazol-2-yl]-2-phenyl-pyridine-4-carboxamide"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
L1K  "Create component"  2019-07-12  PDBE  
L1K  "Initial release"   2019-11-20  RCSB  
##
