data_KJK
# 
_chem_comp.id                                    KJK 
_chem_comp.name                                  "(3~{R})-3-[2-[4-(2-azanylethylamino)cyclohexyl]ethanoylamino]-2-oxidanyl-3,4-dihydro-1,2-benzoxaborinine-8-carboxylic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H28 B N3 O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2019-05-24 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        389.254 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     KJK 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6RTN 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
KJK B07 B1  B 0 1 N N N N N N 19.558 -14.718 0.659  2.373   0.318  -0.887 B07 KJK 1  
KJK C10 C1  C 0 1 Y N N N N N 21.668 -13.959 1.572  4.504   0.130  0.068  C10 KJK 2  
KJK C11 C2  C 0 1 Y N N N N N 22.578 -12.931 1.445  5.770   0.695  0.325  C11 KJK 3  
KJK C12 C3  C 0 1 N N N N N N 22.074 -11.558 0.981  6.012   2.119  0.032  C12 KJK 4  
KJK C15 C4  C 0 1 Y N N N N N 23.933 -13.166 1.733  6.794   -0.089 0.856  C15 KJK 5  
KJK C16 C5  C 0 1 Y N N N N N 24.354 -14.444 2.157  6.561   -1.419 1.129  C16 KJK 6  
KJK C17 C6  C 0 1 Y N N N N N 23.424 -15.483 2.295  5.320   -1.972 0.872  C17 KJK 7  
KJK C18 C7  C 0 1 Y N N N N N 22.091 -15.238 2.013  4.291   -1.207 0.338  C18 KJK 8  
KJK C19 C8  C 0 1 N N N N N N 20.990 -16.338 2.126  2.981   -1.907 0.076  C19 KJK 9  
KJK C20 C9  C 0 1 N N R N N N 20.068 -16.199 0.935  1.841   -0.889 -0.016 C20 KJK 10 
KJK C22 C10 C 0 1 N N N N N N 21.271 -18.075 -0.394 -0.559  -1.275 -0.177 C22 KJK 11 
KJK C23 C11 C 0 1 N N N N N N 22.124 -18.521 -1.615 -1.756  -1.903 -0.844 C23 KJK 12 
KJK C24 C12 C 0 1 N N N N N N 23.588 -18.724 -1.222 -3.028  -1.492 -0.099 C24 KJK 13 
KJK C25 C13 C 0 1 N N N N N N 24.197 -17.349 -0.831 -4.229  -2.226 -0.698 C25 KJK 14 
KJK C26 C14 C 0 1 N N N N N N 25.681 -17.476 -0.474 -5.501  -1.816 0.047  C26 KJK 15 
KJK C27 C15 C 0 1 N N N N N N 26.500 -18.118 -1.605 -5.707  -0.306 -0.089 C27 KJK 16 
KJK C29 C16 C 0 1 N N N N N N 28.656 -17.213 -0.825 -7.488  1.327  0.069  C29 KJK 17 
KJK C30 C17 C 0 1 N N N N N N 29.972 -17.585 -0.158 -8.756  1.705  0.838  C30 KJK 18 
KJK C32 C18 C 0 1 N N N N N N 25.876 -19.423 -2.172 -4.506  0.428  0.510  C32 KJK 19 
KJK C33 C19 C 0 1 N N N N N N 24.345 -19.378 -2.378 -3.234  0.018  -0.235 C33 KJK 20 
KJK N21 N1  N 0 1 N N N N N N 20.872 -16.648 -0.242 0.677   -1.499 -0.664 N21 KJK 21 
KJK N28 N2  N 0 1 N N N N N N 27.839 -18.454 -1.090 -6.928  0.088  0.626  N28 KJK 22 
KJK N31 N3  N 0 1 N N N N N N 30.031 -17.053 1.192  -9.315  2.944  0.281  N31 KJK 23 
KJK O08 O1  O 0 1 N N N N N N 19.605 -14.506 -0.696 1.706   0.739  -2.067 O08 KJK 24 
KJK O09 O2  O 0 1 N N N N N N 20.246 -13.719 1.276  3.553   0.964  -0.422 O09 KJK 25 
KJK O13 O3  O 0 1 N N N N N N 22.104 -11.251 -0.243 5.121   2.804  -0.431 O13 KJK 26 
KJK O14 O4  O 0 1 N N N N N N 21.616 -10.733 1.803  7.221   2.661  0.276  O14 KJK 27 
KJK O34 O5  O 0 1 N N N N N N 20.938 -18.878 0.423  -0.709  -0.570 0.798  O34 KJK 28 
KJK H1  H1  H 0 1 N N N N N N 24.653 -12.368 1.630  7.763   0.344  1.052  H1  KJK 29 
KJK H2  H2  H 0 1 N N N N N N 25.396 -14.622 2.376  7.348   -2.031 1.544  H2  KJK 30 
KJK H3  H3  H 0 1 N N N N N N 23.743 -16.463 2.617  5.148   -3.016 1.089  H3  KJK 31 
KJK H4  H4  H 0 1 N N N N N N 20.420 -16.202 3.057  3.048   -2.459 -0.861 H4  KJK 32 
KJK H5  H5  H 0 1 N N N N N N 21.456 -17.334 2.123  2.775   -2.602 0.891  H5  KJK 33 
KJK H6  H6  H 0 1 N N N N N N 19.194 -16.854 1.064  1.573   -0.539 0.981  H6  KJK 34 
KJK H7  H7  H 0 1 N N N N N N 22.066 -17.748 -2.395 -1.816  -1.563 -1.878 H7  KJK 35 
KJK H8  H8  H 0 1 N N N N N N 21.723 -19.468 -2.006 -1.657  -2.988 -0.822 H8  KJK 36 
KJK H9  H9  H 0 1 N N N N N N 23.632 -19.388 -0.346 -2.932  -1.752 0.955  H9  KJK 37 
KJK H10 H10 H 0 1 N N N N N N 24.091 -16.656 -1.679 -4.326  -1.966 -1.752 H10 KJK 38 
KJK H11 H11 H 0 1 N N N N N N 23.653 -16.951 0.038  -4.083  -3.302 -0.601 H11 KJK 39 
KJK H12 H12 H 0 1 N N N N N N 25.776 -18.098 0.428  -6.357  -2.339 -0.380 H12 KJK 40 
KJK H13 H13 H 0 1 N N N N N N 26.083 -16.472 -0.272 -5.405  -2.076 1.101  H13 KJK 41 
KJK H14 H14 H 0 1 N N N N N N 26.594 -17.392 -2.426 -5.803  -0.046 -1.143 H14 KJK 42 
KJK H15 H15 H 0 1 N N N N N N 28.862 -16.703 -1.778 -7.732  1.175  -0.982 H15 KJK 43 
KJK H16 H16 H 0 1 N N N N N N 28.091 -16.540 -0.164 -6.756  2.129  0.160  H16 KJK 44 
KJK H17 H17 H 0 1 N N N N N N 30.060 -18.681 -0.119 -9.488  0.902  0.748  H17 KJK 45 
KJK H18 H18 H 0 1 N N N N N N 30.805 -17.171 -0.746 -8.511  1.857  1.889  H18 KJK 46 
KJK H19 H19 H 0 1 N N N N N N 26.102 -20.242 -1.473 -4.653  1.504  0.413  H19 KJK 47 
KJK H20 H20 H 0 1 N N N N N N 26.345 -19.631 -3.145 -4.410  0.168  1.564  H20 KJK 48 
KJK H21 H21 H 0 1 N N N N N N 24.135 -18.810 -3.296 -2.378  0.541  0.192  H21 KJK 49 
KJK H22 H22 H 0 1 N N N N N N 23.980 -20.409 -2.493 -3.330  0.278  -1.289 H22 KJK 50 
KJK H23 H23 H 0 1 N N N N N N 21.146 -15.982 -0.936 0.797   -2.063 -1.444 H23 KJK 51 
KJK H24 H24 H 0 1 N N N N N N 27.740 -18.966 -0.237 -7.611  -0.655 0.613  H24 KJK 52 
KJK H26 H26 H 0 1 N N N N N N 30.902 -17.307 1.613  -9.490  2.849  -0.708 H26 KJK 53 
KJK H27 H27 H 0 1 N N N N N N 29.954 -16.056 1.161  -10.154 3.214  0.772  H27 KJK 54 
KJK H29 H29 H 0 1 N N N N N N 20.103 -13.718 -0.877 2.128   1.487  -2.512 H29 KJK 55 
KJK H30 H30 H 0 1 N N N N N N 21.342 -9.947  1.345  7.332   3.599  0.068  H30 KJK 56 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
KJK C33 C32 SING N N 1  
KJK C33 C24 SING N N 2  
KJK C32 C27 SING N N 3  
KJK C23 C24 SING N N 4  
KJK C23 C22 SING N N 5  
KJK C27 N28 SING N N 6  
KJK C27 C26 SING N N 7  
KJK C24 C25 SING N N 8  
KJK N28 C29 SING N N 9  
KJK C25 C26 SING N N 10 
KJK C29 C30 SING N N 11 
KJK O08 B07 SING N N 12 
KJK C22 N21 SING N N 13 
KJK C22 O34 DOUB N N 14 
KJK O13 C12 DOUB N N 15 
KJK N21 C20 SING N N 16 
KJK C30 N31 SING N N 17 
KJK B07 C20 SING N N 18 
KJK B07 O09 SING N N 19 
KJK C20 C19 SING N N 20 
KJK C12 C11 SING N N 21 
KJK C12 O14 SING N N 22 
KJK O09 C10 SING N N 23 
KJK C11 C10 DOUB Y N 24 
KJK C11 C15 SING Y N 25 
KJK C10 C18 SING Y N 26 
KJK C15 C16 DOUB Y N 27 
KJK C18 C19 SING N N 28 
KJK C18 C17 DOUB Y N 29 
KJK C16 C17 SING Y N 30 
KJK C15 H1  SING N N 31 
KJK C16 H2  SING N N 32 
KJK C17 H3  SING N N 33 
KJK C19 H4  SING N N 34 
KJK C19 H5  SING N N 35 
KJK C20 H6  SING N N 36 
KJK C23 H7  SING N N 37 
KJK C23 H8  SING N N 38 
KJK C24 H9  SING N N 39 
KJK C25 H10 SING N N 40 
KJK C25 H11 SING N N 41 
KJK C26 H12 SING N N 42 
KJK C26 H13 SING N N 43 
KJK C27 H14 SING N N 44 
KJK C29 H15 SING N N 45 
KJK C29 H16 SING N N 46 
KJK C30 H17 SING N N 47 
KJK C30 H18 SING N N 48 
KJK C32 H19 SING N N 49 
KJK C32 H20 SING N N 50 
KJK C33 H21 SING N N 51 
KJK C33 H22 SING N N 52 
KJK N21 H23 SING N N 53 
KJK N28 H24 SING N N 54 
KJK N31 H26 SING N N 55 
KJK N31 H27 SING N N 56 
KJK O08 H29 SING N N 57 
KJK O14 H30 SING N N 58 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
KJK InChI            InChI                1.03  "InChI=1S/C19H28BN3O5/c21-8-9-22-14-6-4-12(5-7-14)10-17(24)23-16-11-13-2-1-3-15(19(25)26)18(13)28-20(16)27/h1-3,12,14,16,22,27H,4-11,21H2,(H,23,24)(H,25,26)/t12-,14-,16-/m0/s1" 
KJK InChIKey         InChI                1.03  PFZUWUXKQPRWAL-NOLJZWGESA-N                                                                                                                                                      
KJK SMILES_CANONICAL CACTVS               3.385 "NCCN[C@@H]1CC[C@H](CC1)CC(=O)N[C@H]2Cc3cccc(C(O)=O)c3OB2O"                                                                                                                      
KJK SMILES           CACTVS               3.385 "NCCN[CH]1CC[CH](CC1)CC(=O)N[CH]2Cc3cccc(C(O)=O)c3OB2O"                                                                                                                          
KJK SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "B1([C@H](Cc2cccc(c2O1)C(=O)O)NC(=O)CC3CCC(CC3)NCCN)O"                                                                                                                           
KJK SMILES           "OpenEye OEToolkits" 2.0.7 "B1(C(Cc2cccc(c2O1)C(=O)O)NC(=O)CC3CCC(CC3)NCCN)O"                                                                                                                               
# 
_pdbx_chem_comp_identifier.comp_id           KJK 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(3~{R})-3-[2-[4-(2-azanylethylamino)cyclohexyl]ethanoylamino]-2-oxidanyl-3,4-dihydro-1,2-benzoxaborinine-8-carboxylic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
KJK "Create component" 2019-05-24 PDBE 
KJK "Initial release"  2019-09-11 RCSB 
KJK "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            KJK 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               B07 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
