data_K9K
#

_chem_comp.id                                   K9K
_chem_comp.name                                 "(10aR)-2-(((1r,4R)-4-((2-aminoethyl)amino)cyclohexyl)methyl)-6-carboxy-4-hydroxy-4,10a-dihydro-10H-benzo[5,6][1,2]oxaborinino[2,3-b][1,4,2]oxazaborol-4-uide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C19 H27 B N3 O5"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   -1
_chem_comp.pdbx_initial_date                    2019-05-08
_chem_comp.pdbx_modified_date                   2020-04-30
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       388.246
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    K9K
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  Y
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6RMF
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 PDBE
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
K9K  B13   B1   B  -1  1  N  N  N  26.764  3.276  15.541    1.845  -0.801  -0.379  B13   K9K   1  
K9K  C05   C1   C   0  1  N  N  N  31.710  6.371  10.738   -5.178  -0.064   0.615  C05   K9K   2  
K9K  C06   C2   C   0  1  N  N  N  30.765  5.193  11.100   -4.707   0.538   1.940  C06   K9K   3  
K9K  C07   C3   C   0  1  N  N  N  29.510  5.491  11.946   -3.409  -0.143   2.377  C07   K9K   4  
K9K  C08   C4   C   0  1  N  N  N  29.625  6.462  13.122   -2.335   0.073   1.309  C08   K9K   5  
K9K  C09   C5   C   0  1  N  N  N  29.305  5.825  14.490   -1.037  -0.608   1.747  C09   K9K   6  
K9K  C10   C6   C   0  1  N  N  N  28.431  4.600  14.629    0.054  -0.293   0.756  C10   K9K   7  
K9K  C12   C7   C   0  1  N  N  R  27.736  2.436  14.574    1.164   0.519  -1.011  C12   K9K   8  
K9K  C17   C8   C   0  1  Y  N  N  27.903  2.314  17.413    3.907   0.286  -0.333  C17   K9K   9  
K9K  C18   C9   C   0  1  Y  N  N  28.246  2.655  18.740    5.299   0.143  -0.175  C18   K9K  10  
K9K  C19   C10  C   0  1  N  N  N  27.289  3.520  19.539    5.899  -1.202  -0.118  C19   K9K  11  
K9K  C22   C11  C   0  1  Y  N  N  29.446  2.209  19.276    6.110   1.274  -0.072  C22   K9K  12  
K9K  C23   C12  C   0  1  Y  N  N  30.312  1.427  18.508    5.544   2.528  -0.125  C23   K9K  13  
K9K  C24   C13  C   0  1  Y  N  N  29.963  1.096  17.200    4.175   2.666  -0.269  C24   K9K  14  
K9K  C25   C14  C   0  1  Y  N  N  28.736  1.534  16.641    3.355   1.553  -0.361  C25   K9K  15  
K9K  C26   C15  C   0  1  N  N  N  28.328  1.221  15.240    1.871   1.762  -0.461  C26   K9K  16  
K9K  C27   C16  C   0  1  N  N  N  30.979  7.123  13.082   -2.806  -0.529  -0.016  C27   K9K  17  
K9K  C28   C17  C   0  1  N  N  N  31.432  7.538  11.687   -4.104   0.152  -0.453  C28   K9K  18  
K9K  N11   N1   N   0  1  N  N  N  28.634  3.450  14.005   -0.142   0.448  -0.286  N11   K9K  19  
K9K  O14   O1   O   0  1  N  N  N  25.479  3.605  15.159    1.330  -1.888  -1.028  O14   K9K  20  
K9K  O15   O2   O   0  1  N  N  N  27.471  4.662  15.605    1.319  -0.763   0.887  O15   K9K  21  
K9K  O16   O3   O   0  1  N  N  N  26.682  2.792  16.953    3.166  -0.828  -0.485  O16   K9K  22  
K9K  O20   O4   O   0  1  N  N  N  26.049  3.459  19.357    5.193  -2.187  -0.208  O20   K9K  23  
K9K  O21   O5   O   0  1  N  N  N  27.816  4.318  20.353    7.231  -1.340   0.033  O21   K9K  24  
K9K  H051  H2   H   0  0  N  N  N  32.055  6.531   9.706   -5.353  -1.132   0.743  H051  K9K  25  
K9K  H061  H3   H   0  0  N  N  N  30.421  4.750  10.154   -4.532   1.607   1.812  H061  K9K  26  
K9K  H062  H4   H   0  0  N  N  N  31.363  4.455  11.655   -5.472   0.384   2.701  H062  K9K  27  
K9K  H072  H5   H   0  0  N  N  N  28.750  5.899  11.263   -3.074   0.286   3.322  H072  K9K  28  
K9K  H071  H6   H   0  0  N  N  N  29.160  4.531  12.353   -3.584  -1.211   2.506  H071  K9K  29  
K9K  H081  H7   H   0  0  N  N  N  28.876  7.251  12.958   -2.160   1.141   1.181  H081  K9K  30  
K9K  H092  H8   H   0  0  N  N  N  30.274  5.562  14.939   -0.749  -0.243   2.732  H092  K9K  31  
K9K  H091  H9   H   0  0  N  N  N  28.825  6.613  15.089   -1.189  -1.686   1.789  H091  K9K  32  
K9K  H221  H12  H   0  0  N  N  N  29.711  2.467  20.291    7.178   1.166   0.050  H221  K9K  33  
K9K  H231  H13  H   0  0  N  N  N  31.246  1.081  18.925    6.170   3.406  -0.055  H231  K9K  34  
K9K  H241  H14  H   0  0  N  N  N  30.636  0.498  16.604    3.740   3.654  -0.309  H241  K9K  35  
K9K  H262  H15  H   0  0  N  N  N  27.579  0.416  15.253    1.674   2.605  -1.123  H262  K9K  36  
K9K  H261  H16  H   0  0  N  N  N  29.210  0.892  14.672    1.475   1.988   0.529  H261  K9K  37  
K9K  H272  H17  H   0  0  N  N  N  31.719  6.418  13.489   -2.040  -0.375  -0.777  H272  K9K  38  
K9K  H271  H18  H   0  0  N  N  N  30.942  8.022  13.714   -2.981  -1.597   0.112  H271  K9K  39  
K9K  H281  H19  H   0  0  N  N  N  32.355  8.128  11.787   -4.439  -0.277  -1.398  H281  K9K  40  
K9K  H282  H20  H   0  0  N  N  N  30.644  8.163  11.242   -3.928   1.220  -0.581  H282  K9K  41  
K9K  H141  H23  H   0  0  N  N  N  25.058  4.098  15.853    1.548  -2.734  -0.613  H141  K9K  42  
K9K  H5    H24  H   0  1  N  N  N  27.139  4.833  20.776    7.579  -2.242   0.065  H5    K9K  43  
K9K  N1    N2   N   0  1  N  N  N       ?      ?       ?   -6.424   0.590   0.195  N1    K9K  44  
K9K  C2    C18  C   0  1  N  N  N       ?      ?       ?   -7.210  -0.288  -0.683  C2    K9K  45  
K9K  C3    C19  C   0  1  N  N  N       ?      ?       ?   -8.498   0.426  -1.098  C3    K9K  46  
K9K  N2    N3   N   0  1  N  N  N       ?      ?       ?   -9.283  -0.452  -1.975  N2    K9K  47  
K9K  H7    H29  H   0  1  N  N  N       ?      ?       ?   -6.967   0.881   0.994  H7    K9K  48  
K9K  H6    H21  H   0  1  N  N  N       ?      ?       ?  -10.139  -0.003  -2.264  H6    K9K  49  
K9K  H2    H22  H   0  1  N  N  N       ?      ?       ?   -8.741  -0.744  -2.775  H2    K9K  50  
K9K  H1    H1   H   0  1  N  N  N       ?      ?       ?   -6.626  -0.531  -1.571  H1    K9K  51  
K9K  H3    H25  H   0  1  N  N  N       ?      ?       ?   -7.459  -1.206  -0.150  H3    K9K  52  
K9K  H4    H26  H   0  1  N  N  N       ?      ?       ?   -9.082   0.668  -0.210  H4    K9K  53  
K9K  H8    H27  H   0  1  N  N  N       ?      ?       ?   -8.249   1.344  -1.631  H8    K9K  54  
K9K  H9    H28  H   0  1  N  N  N  27.098  2.070  13.756    1.085   0.502  -2.098  H9    K9K  55  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
K9K  C05  C06   SING  N  N   1  
K9K  C05  C28   SING  N  N   2  
K9K  C06  C07   SING  N  N   3  
K9K  C28  C27   SING  N  N   4  
K9K  C07  C08   SING  N  N   5  
K9K  C27  C08   SING  N  N   6  
K9K  C08  C09   SING  N  N   7  
K9K  N11  C12   SING  N  N   8  
K9K  N11  C10   DOUB  N  N   9  
K9K  C09  C10   SING  N  N  10  
K9K  C12  C26   SING  N  N  11  
K9K  C12  B13   SING  N  N  12  
K9K  C10  O15   SING  N  N  13  
K9K  O14  B13   SING  N  N  14  
K9K  C26  C25   SING  N  N  15  
K9K  B13  O15   SING  N  N  16  
K9K  B13  O16   SING  N  N  17  
K9K  C25  C24   DOUB  Y  N  18  
K9K  C25  C17   SING  Y  N  19  
K9K  O16  C17   SING  N  N  20  
K9K  C24  C23   SING  Y  N  21  
K9K  C17  C18   DOUB  Y  N  22  
K9K  C23  C22   DOUB  Y  N  23  
K9K  C18  C22   SING  Y  N  24  
K9K  C18  C19   SING  N  N  25  
K9K  O20  C19   DOUB  N  N  26  
K9K  C19  O21   SING  N  N  27  
K9K  C05  H051  SING  N  N  28  
K9K  C06  H061  SING  N  N  29  
K9K  C06  H062  SING  N  N  30  
K9K  C07  H072  SING  N  N  31  
K9K  C07  H071  SING  N  N  32  
K9K  C08  H081  SING  N  N  33  
K9K  C09  H092  SING  N  N  34  
K9K  C09  H091  SING  N  N  35  
K9K  C22  H221  SING  N  N  36  
K9K  C23  H231  SING  N  N  37  
K9K  C24  H241  SING  N  N  38  
K9K  C26  H262  SING  N  N  39  
K9K  C26  H261  SING  N  N  40  
K9K  C27  H272  SING  N  N  41  
K9K  C27  H271  SING  N  N  42  
K9K  C28  H281  SING  N  N  43  
K9K  C28  H282  SING  N  N  44  
K9K  O14  H141  SING  N  N  45  
K9K  O21  H5    SING  N  N  46  
K9K  C05  N1    SING  N  N  47  
K9K  N1   C2    SING  N  N  48  
K9K  C2   C3    SING  N  N  49  
K9K  C3   N2    SING  N  N  50  
K9K  N1   H7    SING  N  N  51  
K9K  N2   H6    SING  N  N  52  
K9K  N2   H2    SING  N  N  53  
K9K  C2   H1    SING  N  N  54  
K9K  C2   H3    SING  N  N  55  
K9K  C3   H4    SING  N  N  56  
K9K  C3   H8    SING  N  N  57  
K9K  C12  H9    SING  N  N  58  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
K9K  InChI             InChI                 1.03   "InChI=1S/C19H27BN3O5/c21-8-9-22-14-6-4-12(5-7-14)10-17-23-16-11-13-2-1-3-15(19(24)25)18(13)28-20(16,26)27-17/h1-3,12,14,16,22,26H,4-11,21H2,(H,24,25)/q-1/t12-,14-,16-,20-/m0/s1"  
K9K  InChIKey          InChI                 1.03   SXCHFKLXJGSRKQ-DXJCSPRDSA-N  
K9K  SMILES_CANONICAL  CACTVS                3.385  "NCCN[C@@H]1CC[C@H](CC1)CC2=N[C@H]3Cc4cccc(C(O)=O)c4O[B-]3(O)O2"  
K9K  SMILES            CACTVS                3.385  "NCCN[CH]1CC[CH](CC1)CC2=N[CH]3Cc4cccc(C(O)=O)c4O[B-]3(O)O2"  
K9K  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "[B-]12([C@H](Cc3cccc(c3O1)C(=O)O)N=C(O2)CC4CCC(CC4)NCCN)O"  
K9K  SMILES            "OpenEye OEToolkits"  2.0.7  "[B-]12(C(Cc3cccc(c3O1)C(=O)O)N=C(O2)CC4CCC(CC4)NCCN)O"  
#
_pdbx_chem_comp_identifier.comp_id          K9K
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.7
_pdbx_chem_comp_identifier.identifier       "(7~{R})-5-[[4-(2-azanylethylamino)cyclohexyl]methyl]-3-oxidanyl-2,4-dioxa-6-aza-3-boranuidatricyclo[7.4.0.0^{3,7}]trideca-1(13),5,9,11-tetraene-13-carboxylic acid"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
K9K  "Create component"    2019-05-08  PDBE  
K9K  "Initial release"     2019-09-11  RCSB  
K9K  "Other modification"  2019-10-24  RCSB  
K9K  "Modify charge"       2020-04-30  PDBE  
##
