data_JZK
# 
_chem_comp.id                                    JZK 
_chem_comp.name                                  "2-[(2-chlorobenzyl)amino]-1-(cyclohexylmethyl)-1H-benzimidazole-5-carboxamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H25 Cl N4 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2009-09-29 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        396.913 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     JZK 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3JZF 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
JZK N1   N1   N  0 1 N N N 39.982 -27.655 36.718 6.720  1.816  -0.043 N1   JZK 1  
JZK C2   C2   C  0 1 N N N 40.115 -26.265 36.581 5.533  2.295  0.378  C2   JZK 2  
JZK O3   O3   O  0 1 N N N 40.971 -25.721 35.846 5.485  3.337  1.003  O3   JZK 3  
JZK C4   C4   C  0 1 Y N N 39.029 -25.417 37.211 4.290  1.555  0.081  C4   JZK 4  
JZK C5   C5   C  0 1 Y N N 39.152 -23.997 37.178 4.347  0.355  -0.639 C5   JZK 5  
JZK C6   C6   C  0 1 Y N N 38.147 -23.136 37.662 3.205  -0.338 -0.920 C6   JZK 6  
JZK C7   C7   C  0 1 Y N N 36.999 -23.762 38.212 1.974  0.142  -0.493 C7   JZK 7  
JZK N8   N8   N  0 1 Y N N 35.827 -23.290 38.769 0.675  -0.315 -0.616 N8   JZK 8  
JZK C9   C9   C  0 1 N N N 35.370 -21.901 38.732 0.247  -1.540 -1.295 C9   JZK 9  
JZK C10  C10  C  0 1 N N N 34.447 -21.697 37.512 0.240  -2.700 -0.297 C10  JZK 10 
JZK C11  C11  C  0 1 N N N 33.620 -20.439 37.771 -0.326 -3.951 -0.974 C11  JZK 11 
JZK C12  C12  C  0 1 N N N 34.245 -19.177 37.183 -0.333 -5.111 0.024  C12  JZK 12 
JZK C13  C13  C  0 1 N N N 34.590 -19.283 35.692 1.096  -5.387 0.495  C13  JZK 13 
JZK C14  C14  C  0 1 N N N 34.609 -20.722 35.154 1.661  -4.137 1.171  C14  JZK 14 
JZK C15  C15  C  0 1 N N N 35.295 -21.608 36.213 1.668  -2.977 0.174  C15  JZK 15 
JZK C16  C16  C  0 1 Y N N 35.069 -24.361 39.152 -0.135 0.587  0.014  C16  JZK 16 
JZK N17  N17  N  0 1 N N N 33.871 -24.173 39.740 -1.507 0.486  0.111  N17  JZK 17 
JZK C18  C18  C  0 1 N N N 33.217 -25.270 40.411 -2.269 1.520  0.814  C18  JZK 18 
JZK C19  C19  C  0 1 Y N N 33.759 -25.641 41.789 -3.736 1.175  0.778  C19  JZK 19 
JZK C20  C20  C  0 1 Y N N 34.482 -24.767 42.642 -4.359 0.686  1.910  C20  JZK 20 
JZK C21  C21  C  0 1 Y N N 34.913 -25.245 43.921 -5.705 0.369  1.877  C21  JZK 21 
JZK C22  C22  C  0 1 Y N N 34.634 -26.575 44.354 -6.427 0.541  0.711  C22  JZK 22 
JZK C23  C23  C  0 1 Y N N 33.919 -27.446 43.511 -5.804 1.030  -0.422 C23  JZK 23 
JZK C24  C24  C  0 1 Y N N 33.494 -26.967 42.239 -4.460 1.353  -0.388 C24  JZK 24 
JZK CL25 CL25 CL 0 0 N N N 32.625 -28.011 41.181 -3.679 1.975  -1.808 CL25 JZK 25 
JZK N26  N26  N  0 1 Y N N 35.673 -25.487 38.841 0.584  1.562  0.511  N26  JZK 26 
JZK C27  C27  C  0 1 Y N N 36.848 -25.159 38.260 1.897  1.346  0.232  C27  JZK 27 
JZK C28  C28  C  0 1 Y N N 37.853 -26.005 37.762 3.065  2.048  0.522  C28  JZK 28 
JZK HN1  HN1  H  0 1 N N N 40.590 -28.268 36.213 7.536  2.303  0.152  HN1  JZK 29 
JZK HN1A HN1A H  0 0 N N N 39.279 -28.033 37.320 6.759  0.983  -0.539 HN1A JZK 30 
JZK H5   H5   H  0 1 N N N 40.051 -23.564 36.766 5.301  -0.024 -0.975 H5   JZK 31 
JZK H6   H6   H  0 1 N N N 38.245 -22.061 37.617 3.259  -1.262 -1.477 H6   JZK 32 
JZK H9   H9   H  0 1 N N N 34.815 -21.672 39.654 -0.756 -1.401 -1.698 H9   JZK 33 
JZK H9A  H9A  H  0 1 N N N 36.239 -21.231 38.651 0.937  -1.765 -2.108 H9A  JZK 34 
JZK H10  H10  H  0 1 N N N 33.763 -22.547 37.371 -0.382 -2.438 0.559  H10  JZK 35 
JZK H11  H11  H  0 1 N N N 32.629 -20.578 37.314 -1.344 -3.754 -1.310 H11  JZK 36 
JZK H11A H11A H  0 0 N N N 33.530 -20.304 38.859 0.295  -4.212 -1.831 H11A JZK 37 
JZK H12  H12  H  0 1 N N N 33.526 -18.354 37.307 -0.954 -4.849 0.881  H12  JZK 38 
JZK H12A H12A H  0 0 N N N 35.176 -18.972 37.732 -0.736 -6.002 -0.458 H12A JZK 39 
JZK H13  H13  H  0 1 N N N 33.832 -18.720 35.128 1.090  -6.214 1.206  H13  JZK 40 
JZK H13A H13A H  0 0 N N N 35.591 -18.852 35.544 1.717  -5.649 -0.362 H13A JZK 41 
JZK H14  H14  H  0 1 N N N 33.582 -21.072 34.976 1.040  -3.875 2.028  H14  JZK 42 
JZK H14A H14A H  0 0 N N N 35.167 -20.764 34.207 2.679  -4.334 1.507  H14A JZK 43 
JZK H15  H15  H  0 1 N N N 36.276 -21.174 36.458 2.289  -3.239 -0.683 H15  JZK 44 
JZK H15A H15A H  0 0 N N N 35.422 -22.620 35.801 2.071  -2.086 0.656  H15A JZK 45 
JZK HN17 HN17 H  0 0 N N N 34.010 -23.467 40.434 -1.967 -0.271 -0.285 HN17 JZK 46 
JZK H18  H18  H  0 1 N N N 32.161 -24.990 40.540 -1.935 1.577  1.850  H18  JZK 47 
JZK H18A H18A H  0 0 N N N 33.325 -26.156 39.769 -2.110 2.483  0.328  H18A JZK 48 
JZK H20  H20  H  0 1 N N N 34.704 -23.757 42.331 -3.795 0.551  2.821  H20  JZK 49 
JZK H21  H21  H  0 1 N N N 35.462 -24.583 44.573 -6.191 -0.013 2.762  H21  JZK 50 
JZK H22  H22  H  0 1 N N N 34.970 -26.912 45.324 -7.478 0.293  0.686  H22  JZK 51 
JZK H23  H23  H  0 1 N N N 33.697 -28.456 43.822 -6.369 1.164  -1.333 H23  JZK 52 
JZK H28  H28  H  0 1 N N N 37.737 -27.078 37.796 3.020  2.971  1.082  H28  JZK 53 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
JZK N1  C2   SING N N 1  
JZK C2  O3   DOUB N N 2  
JZK C2  C4   SING N N 3  
JZK C4  C5   DOUB Y N 4  
JZK C4  C28  SING Y N 5  
JZK C5  C6   SING Y N 6  
JZK C6  C7   DOUB Y N 7  
JZK C7  N8   SING Y N 8  
JZK C7  C27  SING Y N 9  
JZK N8  C9   SING N N 10 
JZK N8  C16  SING Y N 11 
JZK C9  C10  SING N N 12 
JZK C10 C11  SING N N 13 
JZK C10 C15  SING N N 14 
JZK C11 C12  SING N N 15 
JZK C12 C13  SING N N 16 
JZK C13 C14  SING N N 17 
JZK C14 C15  SING N N 18 
JZK C16 N17  SING N N 19 
JZK C16 N26  DOUB Y N 20 
JZK N17 C18  SING N N 21 
JZK C18 C19  SING N N 22 
JZK C19 C20  DOUB Y N 23 
JZK C19 C24  SING Y N 24 
JZK C20 C21  SING Y N 25 
JZK C21 C22  DOUB Y N 26 
JZK C22 C23  SING Y N 27 
JZK C23 C24  DOUB Y N 28 
JZK C24 CL25 SING N N 29 
JZK N26 C27  SING Y N 30 
JZK C27 C28  DOUB Y N 31 
JZK N1  HN1  SING N N 32 
JZK N1  HN1A SING N N 33 
JZK C5  H5   SING N N 34 
JZK C6  H6   SING N N 35 
JZK C9  H9   SING N N 36 
JZK C9  H9A  SING N N 37 
JZK C10 H10  SING N N 38 
JZK C11 H11  SING N N 39 
JZK C11 H11A SING N N 40 
JZK C12 H12  SING N N 41 
JZK C12 H12A SING N N 42 
JZK C13 H13  SING N N 43 
JZK C13 H13A SING N N 44 
JZK C14 H14  SING N N 45 
JZK C14 H14A SING N N 46 
JZK C15 H15  SING N N 47 
JZK C15 H15A SING N N 48 
JZK N17 HN17 SING N N 49 
JZK C18 H18  SING N N 50 
JZK C18 H18A SING N N 51 
JZK C20 H20  SING N N 52 
JZK C21 H21  SING N N 53 
JZK C22 H22  SING N N 54 
JZK C23 H23  SING N N 55 
JZK C28 H28  SING N N 56 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
JZK SMILES           ACDLabs              11.02 "Clc1ccccc1CNc3nc2cc(ccc2n3CC4CCCCC4)C(=O)N"                                                                                                                     
JZK SMILES_CANONICAL CACTVS               3.352 "NC(=O)c1ccc2n(CC3CCCCC3)c(NCc4ccccc4Cl)nc2c1"                                                                                                                   
JZK SMILES           CACTVS               3.352 "NC(=O)c1ccc2n(CC3CCCCC3)c(NCc4ccccc4Cl)nc2c1"                                                                                                                   
JZK SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1ccc(c(c1)CNc2nc3cc(ccc3n2CC4CCCCC4)C(=O)N)Cl"                                                                                                                 
JZK SMILES           "OpenEye OEToolkits" 1.7.0 "c1ccc(c(c1)CNc2nc3cc(ccc3n2CC4CCCCC4)C(=O)N)Cl"                                                                                                                 
JZK InChI            InChI                1.03  "InChI=1S/C22H25ClN4O/c23-18-9-5-4-8-17(18)13-25-22-26-19-12-16(21(24)28)10-11-20(19)27(22)14-15-6-2-1-3-7-15/h4-5,8-12,15H,1-3,6-7,13-14H2,(H2,24,28)(H,25,26)" 
JZK InChIKey         InChI                1.03  DGENNQRBHYDWGG-UHFFFAOYSA-N                                                                                                                                      
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
JZK "SYSTEMATIC NAME" ACDLabs              11.02 "2-[(2-chlorobenzyl)amino]-1-(cyclohexylmethyl)-1H-benzimidazole-5-carboxamide"   
JZK "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "2-[(2-chlorophenyl)methylamino]-1-(cyclohexylmethyl)benzimidazole-5-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
JZK "Create component"     2009-09-29 RCSB 
JZK "Modify aromatic_flag" 2011-06-04 RCSB 
JZK "Modify descriptor"    2011-06-04 RCSB 
# 
