data_JJK
# 
_chem_comp.id                                    JJK 
_chem_comp.name                                  "S-[(S)-hydroxy(pyridin-3-yl)methyl]-L-cysteine" 
_chem_comp.type                                  "L-PEPTIDE LINKING" 
_chem_comp.pdbx_type                             ATOMP 
_chem_comp.formula                               "C9 H12 N2 O3 S" 
_chem_comp.mon_nstd_parent_comp_id               CYS 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2010-08-06 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        228.268 
_chem_comp.one_letter_code                       C 
_chem_comp.three_letter_code                     JJK 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3O91 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              N 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
JJK C   C   C 0 1 N N N N N N -56.160 21.646 6.260  4.204  0.236  -0.135 C   JJK 1  
JJK N   N   N 0 1 N N N N N N -55.212 23.880 6.491  2.810  -1.711 -0.550 N   JJK 2  
JJK O   O   O 0 1 N N N N N N -55.919 20.651 5.590  4.865  -0.470 0.589  O   JJK 3  
JJK N1  N1  N 0 1 Y N N N N N -50.474 25.301 11.290 -4.165 -1.234 -0.147 N1  JJK 4  
JJK C2  C2  C 0 1 Y N N N N N -51.556 24.562 10.972 -2.937 -0.973 0.256  C2  JJK 5  
JJK C3  C3  C 0 1 Y N N N N N -52.666 25.134 10.340 -2.441 0.317  0.224  C3  JJK 6  
JJK C4  C4  C 0 1 Y N N N N N -52.635 26.502 10.052 -3.253 1.341  -0.238 C4  JJK 7  
JJK C5  C5  C 0 1 Y N N N N N -51.504 27.248 10.385 -4.539 1.028  -0.653 C5  JJK 8  
JJK C6  C6  C 0 1 Y N N N N N -50.427 26.617 11.008 -4.965 -0.285 -0.592 C6  JJK 9  
JJK C7  C7  C 0 1 N N S N N N -53.862 24.303 10.000 -1.037 0.606  0.687  C7  JJK 10 
JJK O7  O7  O 0 1 N N N N N N -54.872 25.117 9.387  -0.863 0.116  2.018  O7  JJK 11 
JJK CA  CA  C 0 1 N N R N N N -55.024 22.476 6.822  2.871  -0.247 -0.646 CA  JJK 12 
JJK CB  CB  C 0 1 N N N N N N -54.968 22.311 8.336  1.750  0.366  0.196  CB  JJK 13 
JJK SG  SG  S 0 1 N N N N N N -53.434 22.956 8.925  0.145  -0.214 -0.418 SG  JJK 14 
JJK OXT O3  O 0 1 N Y N N N N -57.515 22.026 6.513  4.655  1.452  -0.481 O3  JJK 15 
JJK HN  HN  H 0 1 N N N N N N -54.456 24.416 6.867  3.500  -2.142 -1.148 HN  JJK 16 
JJK HNA HNA H 0 1 N N N N N N -55.234 23.988 5.497  2.920  -2.016 0.406  HNA JJK 17 
JJK H2  H2  H 0 1 N Y N N N N -51.566 23.508 11.210 -2.311 -1.777 0.614  H2  JJK 18 
JJK H4  H4  H 0 1 N N N N N N -53.480 26.977 9.576  -2.893 2.359  -0.273 H4  JJK 19 
JJK H5  H5  H 0 1 N N N N N N -51.463 28.304 10.163 -5.199 1.801  -1.018 H5  JJK 20 
JJK H6  H6  H 0 1 N N N N N N -49.548 27.189 11.266 -5.965 -0.536 -0.914 H6  JJK 21 
JJK H7  H7  H 0 1 N N N N N N -54.254 23.879 10.936 -0.863 1.682  0.670  H7  JJK 22 
JJK HO7 HO7 H 0 1 N N N N N N -55.627 24.580 9.175  -1.003 -0.836 2.108  HO7 JJK 23 
JJK HA  HA  H 0 1 N N N N N N -54.079 22.129 6.379  2.749  0.054  -1.687 HA  JJK 24 
JJK HB  HB  H 0 1 N N N N N N -55.802 22.859 8.799  1.871  0.065  1.237  HB  JJK 25 
JJK HBA HBA H 0 1 N N N N N N -55.045 21.245 8.595  1.794  1.453  0.124  HBA JJK 26 
JJK HXT HXT H 0 1 N Y N N N N -58.101 21.407 6.094  5.515  1.718  -0.129 H12 JJK 27 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
JJK C   CA  SING N N 1  
JJK C   OXT SING N N 2  
JJK N   CA  SING N N 3  
JJK N   HN  SING N N 4  
JJK N   HNA SING N N 5  
JJK O   C   DOUB N N 6  
JJK C2  N1  DOUB Y N 7  
JJK C2  H2  SING N N 8  
JJK C3  C2  SING Y N 9  
JJK C4  C3  DOUB Y N 10 
JJK C4  C5  SING Y N 11 
JJK C4  H4  SING N N 12 
JJK C5  C6  DOUB Y N 13 
JJK C5  H5  SING N N 14 
JJK C6  N1  SING Y N 15 
JJK C6  H6  SING N N 16 
JJK C7  C3  SING N N 17 
JJK C7  H7  SING N N 18 
JJK O7  C7  SING N N 19 
JJK O7  HO7 SING N N 20 
JJK CA  CB  SING N N 21 
JJK CA  HA  SING N N 22 
JJK CB  SG  SING N N 23 
JJK CB  HB  SING N N 24 
JJK CB  HBA SING N N 25 
JJK SG  C7  SING N N 26 
JJK OXT HXT SING N N 27 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
JJK SMILES           ACDLabs              12.01 "O=C(O)C(N)CSC(O)c1cccnc1"                                                                              
JJK SMILES_CANONICAL CACTVS               3.370 "N[C@@H](CS[C@H](O)c1cccnc1)C(O)=O"                                                                     
JJK SMILES           CACTVS               3.370 "N[CH](CS[CH](O)c1cccnc1)C(O)=O"                                                                        
JJK SMILES_CANONICAL "OpenEye OEToolkits" 1.7.0 "c1cc(cnc1)[C@@H](O)SC[C@@H](C(=O)O)N"                                                                  
JJK SMILES           "OpenEye OEToolkits" 1.7.0 "c1cc(cnc1)C(O)SCC(C(=O)O)N"                                                                            
JJK InChI            InChI                1.03  "InChI=1S/C9H12N2O3S/c10-7(8(12)13)5-15-9(14)6-2-1-3-11-4-6/h1-4,7,9,14H,5,10H2,(H,12,13)/t7-,9-/m0/s1" 
JJK InChIKey         InChI                1.03  QHZWFSKZAVJVMS-CBAPKCEASA-N                                                                             
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
JJK "SYSTEMATIC NAME" ACDLabs              12.01 "S-[(S)-hydroxy(pyridin-3-yl)methyl]-L-cysteine"                           
JJK "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "(2R)-2-azanyl-3-[(S)-hydroxy(pyridin-3-yl)methyl]sulfanyl-propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
JJK "Create component"  2010-08-06 RCSB 
JJK "Modify descriptor" 2011-06-04 RCSB 
JJK "Modify PCM"        2024-09-27 PDBE 
# 
