data_DDK
# 
_chem_comp.id                                    DDK 
_chem_comp.name                                  "(2R)-7-amino-2-(selanylmethyl)heptanoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C8 H17 N O2 Se" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-06-13 
_chem_comp.pdbx_modified_date                    2013-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        238.186 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     DDK 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3WC5 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
DDK OAB OAB O  0 1 N N N 4.826 -17.699 3.780  1.235  -2.878 0.307  OAB DDK 1  
DDK CAK CAK C  0 1 N N N 3.899 -18.482 3.393  1.606  -1.802 -0.099 CAK DDK 2  
DDK OAC OAC O  0 1 N N N 2.744 -18.541 3.953  2.904  -1.601 -0.377 OAC DDK 3  
DDK CAL CAL C  0 1 N N R 4.195 -19.306 2.157  0.611  -0.688 -0.300 CAL DDK 4  
DDK CAF CAF C  0 1 N N N 5.471 -20.122 2.403  0.993  0.502  0.583  CAF DDK 5  
DDK SED SED SE 0 0 N N N 5.245 -21.338 3.953  2.713  1.230  -0.011 SED DDK 6  
DDK CAJ CAJ C  0 1 N N N 4.441 -18.375 0.964  -0.787 -1.178 0.082  CAJ DDK 7  
DDK CAI CAI C  0 1 N N N 3.207 -17.547 0.519  -1.814 -0.090 -0.239 CAI DDK 8  
DDK CAH CAH C  0 1 N N N 3.380 -16.954 -0.911 -3.212 -0.581 0.142  CAH DDK 9  
DDK CAG CAG C  0 1 N N N 4.671 -16.086 -1.091 -4.239 0.507  -0.179 CAG DDK 10 
DDK CAE CAE C  0 1 N N N 4.706 -15.231 0.158  -5.638 0.017  0.203  CAE DDK 11 
DDK NAA NAA N  0 1 N N N 5.245 -13.935 -0.130 -6.624 1.062  -0.105 NAA DDK 12 
DDK H1  H1  H  0 1 N N N 2.709 -17.923 4.674  3.503  -2.346 -0.236 H1  DDK 13 
DDK H2  H2  H  0 1 N N N 3.354 -19.981 1.940  0.616  -0.381 -1.346 H2  DDK 14 
DDK H3  H3  H  0 1 N N N 5.695 -20.719 1.507  0.226  1.273  0.505  H3  DDK 15 
DDK H4  H4  H  0 1 N N N 6.305 -19.434 2.604  1.075  0.174  1.619  H4  DDK 16 
DDK H5  H5  H  0 1 N N N 6.474 -22.098 4.159  2.904  2.403  1.000  H5  DDK 17 
DDK H6  H6  H  0 1 N N N 4.766 -18.990 0.112  -1.023 -2.079 -0.485 H6  DDK 18 
DDK H7  H7  H  0 1 N N N 5.243 -17.674 1.237  -0.816 -1.401 1.148  H7  DDK 19 
DDK H8  H8  H  0 1 N N N 3.060 -16.720 1.230  -1.578 0.811  0.327  H8  DDK 20 
DDK H9  H9  H  0 1 N N N 2.321 -18.199 0.527  -1.786 0.133  -1.306 H9  DDK 21 
DDK H10 H10 H  0 1 N N N 2.506 -16.323 -1.132 -3.449 -1.482 -0.424 H10 DDK 22 
DDK H11 H11 H  0 1 N N N 3.421 -17.787 -1.628 -3.241 -0.804 1.209  H11 DDK 23 
DDK H12 H12 H  0 1 N N N 5.566 -16.723 -1.156 -4.003 1.408  0.387  H12 DDK 24 
DDK H13 H13 H  0 1 N N N 4.600 -15.460 -1.993 -4.211 0.730  -1.245 H13 DDK 25 
DDK H14 H14 H  0 1 N N N 3.683 -15.118 0.547  -5.874 -0.884 -0.363 H14 DDK 26 
DDK H15 H15 H  0 1 N N N 5.334 -15.723 0.915  -5.666 -0.206 1.269  H15 DDK 27 
DDK H16 H16 H  0 1 N N N 5.260 -13.386 0.706  -6.572 1.332  -1.076 H16 DDK 28 
DDK H17 H17 H  0 1 N N N 6.176 -14.032 -0.481 -7.556 0.762  0.138  H17 DDK 29 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DDK CAG CAH SING N N 1  
DDK CAG CAE SING N N 2  
DDK CAH CAI SING N N 3  
DDK NAA CAE SING N N 4  
DDK CAI CAJ SING N N 5  
DDK CAJ CAL SING N N 6  
DDK CAL CAF SING N N 7  
DDK CAL CAK SING N N 8  
DDK CAF SED SING N N 9  
DDK CAK OAB DOUB N N 10 
DDK CAK OAC SING N N 11 
DDK OAC H1  SING N N 12 
DDK CAL H2  SING N N 13 
DDK CAF H3  SING N N 14 
DDK CAF H4  SING N N 15 
DDK SED H5  SING N N 16 
DDK CAJ H6  SING N N 17 
DDK CAJ H7  SING N N 18 
DDK CAI H8  SING N N 19 
DDK CAI H9  SING N N 20 
DDK CAH H10 SING N N 21 
DDK CAH H11 SING N N 22 
DDK CAG H12 SING N N 23 
DDK CAG H13 SING N N 24 
DDK CAE H14 SING N N 25 
DDK CAE H15 SING N N 26 
DDK NAA H16 SING N N 27 
DDK NAA H17 SING N N 28 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
DDK SMILES           ACDLabs              12.01 "O=C(O)C(CCCCCN)C[SeH]"                                                              
DDK InChI            InChI                1.03  "InChI=1S/C8H17NO2Se/c9-5-3-1-2-4-7(6-12)8(10)11/h7,12H,1-6,9H2,(H,10,11)/t7-/m0/s1" 
DDK InChIKey         InChI                1.03  PKYDFIWWGOFUJY-ZETCQYMHSA-N                                                          
DDK SMILES_CANONICAL CACTVS               3.370 "NCCCCC[C@@H](C[SeH])C(O)=O"                                                         
DDK SMILES           CACTVS               3.370 "NCCCCC[CH](C[SeH])C(O)=O"                                                           
DDK SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C(CC[C@@H](C[SeH])C(=O)O)CCN"                                                       
DDK SMILES           "OpenEye OEToolkits" 1.7.6 "C(CCC(C[SeH])C(=O)O)CCN"                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
DDK "SYSTEMATIC NAME" ACDLabs              12.01 "(2R)-7-amino-2-(selanylmethyl)heptanoic acid"  
DDK "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2R)-7-azanyl-2-(selanylmethyl)heptanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
DDK "Create component" 2013-06-13 PDBJ 
DDK "Initial release"  2013-10-02 RCSB 
# 
