data_ARK
# 
_chem_comp.id                                    ARK 
_chem_comp.name                                  "N-({(1S)-5-[4-({2-[2-({2,4-BIS[HYDROXY(OXO)AMMONIO]PHENYL}AMINO)ETHOXY]ETHOXY}METHYL)-1H-1,2,3-TRIAZOL-1-YL]-1-CARBOXYPENTYL}CARBAMOYL)-L-GLUTAMIC ACID" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C25 H36 N8 O13" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    2 
_chem_comp.pdbx_initial_date                     2010-05-14 
_chem_comp.pdbx_modified_date                    2011-06-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        656.599 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     ARK 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        2XEI 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
ARK OAA  OAA  O 0 1 N N N 13.858 48.698 40.215 11.604  2.478  -2.328 OAA  ARK 1  
ARK CBH  CBH  C 0 1 N N N 13.813 47.444 40.045 10.484  3.042  -1.849 CBH  ARK 2  
ARK OAG  OAG  O 0 1 N N N 12.996 46.866 39.297 10.139  4.131  -2.243 OAG  ARK 3  
ARK CAV  CAV  C 0 1 N N N 14.856 46.536 40.813 9.656   2.317  -0.818 CAV  ARK 4  
ARK CAX  CAX  C 0 1 N N N 14.574 45.018 41.042 8.444   3.173  -0.444 CAX  ARK 5  
ARK CBQ  CBQ  C 0 1 N N S 15.884 44.207 41.390 7.604   2.437  0.602  CBQ  ARK 6  
ARK CBJ  CBJ  C 0 1 N N N 16.871 44.417 40.189 6.480   3.329  1.061  CBJ  ARK 7  
ARK OAI  OAI  O 0 1 N N N 16.774 43.624 39.193 6.752   4.510  1.637  OAI  ARK 8  
ARK OAC  OAC  O 0 1 N N N 17.727 45.352 40.258 5.333   2.980  0.911  OAC  ARK 9  
ARK NBE  NBE  N 0 1 N N N 16.583 44.770 42.555 7.050   1.216  0.012  NBE  ARK 10 
ARK CBK  CBK  C 0 1 N N N 17.835 44.413 42.854 6.720   0.176  0.802  CBK  ARK 11 
ARK OAD  OAD  O 0 1 N N N 18.332 43.392 42.347 6.882   0.250  2.005  OAD  ARK 12 
ARK N    N    N 0 1 N N N 18.454 45.191 43.742 6.209   -0.948 0.260  N    ARK 13 
ARK CA   CA   C 0 1 N N S 19.796 44.961 44.242 5.851   -2.079 1.119  CA   ARK 14 
ARK C    C    C 0 1 N N N 19.896 45.556 45.645 7.071   -2.927 1.369  C    ARK 15 
ARK OXT  OXT  O 0 1 N Y N 19.416 46.711 45.800 6.980   -4.025 2.135  OXT  ARK 16 
ARK O    O    O 0 1 N N N 20.517 44.851 46.504 8.132   -2.618 0.879  O    ARK 17 
ARK CB   CB   C 0 1 N N N 20.669 45.826 43.264 4.776   -2.922 0.429  CB   ARK 18 
ARK CAP  CAP  C 0 1 N N N 22.113 45.316 43.234 3.494   -2.099 0.288  CAP  ARK 19 
ARK CAQ  CAQ  C 0 1 N N N 23.057 46.490 43.037 2.420   -2.942 -0.402 CAQ  ARK 20 
ARK CAY  CAY  C 0 1 N N N 24.015 46.275 41.872 1.138   -2.118 -0.543 CAY  ARK 21 
ARK NBR  NBR  N 0 1 Y N N 24.726 47.561 41.645 0.109   -2.926 -1.203 NBR  ARK 22 
ARK CAO  CAO  C 0 1 Y N N 25.131 48.366 42.643 -1.130  -3.179 -0.722 CAO  ARK 23 
ARK NBB  NBB  N 0 1 Y N N 25.011 48.045 40.532 0.227   -3.512 -2.343 NBB  ARK 24 
ARK NBA  NBA  N 0 1 Y N N 25.591 49.133 40.672 -0.859  -4.138 -2.635 NBA  ARK 25 
ARK CBL  CBL  C 0 1 Y N N 25.694 49.376 41.991 -1.741  -3.958 -1.645 CBL  ARK 26 
ARK CAZ  CAZ  C 0 1 N N N 26.281 50.496 42.602 -3.141  -4.511 -1.574 CAZ  ARK 27 
ARK OBG  OBG  O 0 1 N N N 25.433 51.603 42.988 -3.759  -4.088 -0.357 OBG  ARK 28 
ARK CAU  CAU  C 0 1 N N N 25.338 51.678 44.430 -5.097  -4.561 -0.189 CAU  ARK 29 
ARK CAT  CAT  C 0 1 N N N 25.290 53.141 44.955 -5.656  -4.049 1.140  CAT  ARK 30 
ARK OBF  OBF  O 0 1 N N N 26.603 53.557 45.410 -5.761  -2.625 1.096  OBF  ARK 31 
ARK CAS  CAS  C 0 1 N N N 26.775 53.215 46.805 -6.276  -2.042 2.295  CAS  ARK 32 
ARK CAR  CAR  C 0 1 N N N 28.000 52.331 47.092 -6.344  -0.522 2.135  CAR  ARK 33 
ARK NBC  NBC  N 0 1 N N N 29.094 53.181 47.593 -7.316  -0.184 1.092  NBC  ARK 34 
ARK CBN  CBN  C 0 1 Y N N 30.179 52.728 48.244 -7.549  1.131  0.770  CBN  ARK 35 
ARK CAM  CAM  C 0 1 Y N N 30.074 52.078 49.475 -6.959  2.148  1.521  CAM  ARK 36 
ARK CAL  CAL  C 0 1 Y N N 31.223 51.642 50.116 -7.182  3.454  1.212  CAL  ARK 37 
ARK CBM  CBM  C 0 1 Y N N 32.480 51.865 49.550 -8.015  3.803  0.126  CBM  ARK 38 
ARK NBS  NBS  N 1 1 N N N 33.623 51.454 50.113 -8.228  5.094  -0.169 NBS  ARK 39 
ARK OAJ  OAJ  O 0 1 N N N 34.851 51.657 49.432 -7.703  5.965  0.500  OAJ  ARK 40 
ARK OAE  OAE  O 0 1 N N N 33.662 50.692 51.329 -8.946  5.394  -1.105 OAE  ARK 41 
ARK CAN  CAN  C 0 1 Y N N 32.580 52.524 48.342 -8.619  2.800  -0.644 CAN  ARK 42 
ARK CBO  CBO  C 0 1 Y N N 31.443 52.959 47.690 -8.385  1.455  -0.329 CBO  ARK 43 
ARK NBT  NBT  N 1 1 N N N 31.605 53.565 46.517 -8.951  0.483  -1.058 NBT  ARK 44 
ARK OAK  OAK  O 0 1 N N N 32.910 53.705 45.977 -10.046 0.658  -1.561 OAK  ARK 45 
ARK OAF  OAF  O 0 1 N N N 30.476 53.971 45.752 -8.370  -0.576 -1.216 OAF  ARK 46 
ARK HAA  HAA  H 0 1 N N N 13.183 49.113 39.691 12.101  2.981  -2.987 HAA  ARK 47 
ARK HAV1 HAV1 H 0 0 N N N 15.786 46.585 40.228 9.317   1.366  -1.229 HAV1 ARK 48 
ARK HAV2 HAV2 H 0 0 N N N 14.850 46.951 41.832 10.261  2.135  0.070  HAV2 ARK 49 
ARK HAX1 HAX1 H 0 0 N N N 13.868 44.917 41.880 8.784   4.124  -0.034 HAX1 ARK 50 
ARK HAX2 HAX2 H 0 0 N N N 14.162 44.608 40.108 7.840   3.355  -1.333 HAX2 ARK 51 
ARK HBQ  HBQ  H 0 1 N N N 15.605 43.161 41.587 8.232   2.176  1.454  HBQ  ARK 52 
ARK HBE  HBE  H 0 1 N N N 16.111 45.434 43.135 6.920   1.157  -0.947 HBE  ARK 53 
ARK HAI  HAI  H 0 1 N N N 17.429 43.850 38.543 5.998   5.048  1.914  HAI  ARK 54 
ARK H    H    H 0 1 N N N 17.959 45.988 44.087 6.080   -1.007 -0.700 H    ARK 55 
ARK HA   HA   H 0 1 N N N 20.089 43.902 44.289 5.466   -1.706 2.068  HA   ARK 56 
ARK HB1C HB1C H 0 0 N N N 20.244 45.763 42.251 5.127   -3.221 -0.558 HB1C ARK 57 
ARK HB2C HB2C H 0 0 N N N 20.668 46.868 43.616 4.573   -3.811 1.027  HB2C ARK 58 
ARK HB   HB   H 0 1 N N N 19.584 47.008 46.687 7.789   -4.537 2.267  HB   ARK 59 
ARK HAP1 HAP1 H 0 0 N N N 22.345 44.813 44.185 3.144   -1.800 1.276  HAP1 ARK 60 
ARK HAP2 HAP2 H 0 0 N N N 22.234 44.603 42.405 3.698   -1.210 -0.310 HAP2 ARK 61 
ARK HAQ1 HAQ1 H 0 0 N N N 22.458 47.390 42.835 2.771   -3.241 -1.390 HAQ1 ARK 62 
ARK HAQ2 HAQ2 H 0 0 N N N 23.658 46.597 43.952 2.217   -3.831 0.196  HAQ2 ARK 63 
ARK HAY1 HAY1 H 0 0 N N N 24.735 45.479 42.113 0.787   -1.820 0.445  HAY1 ARK 64 
ARK HAY2 HAY2 H 0 0 N N N 23.467 45.968 40.969 1.341   -1.230 -1.141 HAY2 ARK 65 
ARK HAO  HAO  H 0 1 N N N 25.025 48.226 43.709 -1.547  -2.830 0.211  HAO  ARK 66 
ARK HAZ1 HAZ1 H 0 0 N N N 26.760 50.134 43.524 -3.720  -4.145 -2.422 HAZ1 ARK 67 
ARK HAZ2 HAZ2 H 0 0 N N N 26.939 50.915 41.827 -3.103  -5.600 -1.602 HAZ2 ARK 68 
ARK HAU1 HAU1 H 0 0 N N N 24.416 51.166 44.744 -5.716  -4.196 -1.008 HAU1 ARK 69 
ARK HAU2 HAU2 H 0 0 N N N 26.238 51.203 44.848 -5.100  -5.651 -0.189 HAU2 ARK 70 
ARK HAT1 HAT1 H 0 0 N N N 24.962 53.806 44.143 -6.642  -4.481 1.310  HAT1 ARK 71 
ARK HAT2 HAT2 H 0 0 N N N 24.585 53.196 45.798 -4.988  -4.339 1.951  HAT2 ARK 72 
ARK HAS1 HAS1 H 0 0 N N N 26.893 54.151 47.371 -7.275  -2.432 2.488  HAS1 ARK 73 
ARK HAS2 HAS2 H 0 0 N N N 25.888 52.636 47.103 -5.620  -2.290 3.130  HAS2 ARK 74 
ARK HAR1 HAR1 H 0 0 N N N 27.742 51.575 47.848 -6.652  -0.071 3.078  HAR1 ARK 75 
ARK HAR2 HAR2 H 0 0 N N N 28.316 51.821 46.170 -5.362  -0.142 1.854  HAR2 ARK 76 
ARK HBC  HBC  H 0 1 N N N 29.458 53.632 46.778 -7.795  -0.889 0.628  HBC  ARK 77 
ARK HAM  HAM  H 0 1 N N N 29.105 51.916 49.924 -6.320  1.897  2.355  HAM  ARK 78 
ARK HAL  HAL  H 0 1 N N N 31.145 51.125 51.061 -6.718  4.231  1.803  HAL  ARK 79 
ARK HAN  HAN  H 0 1 N N N 33.552 52.700 47.904 -9.257  3.062  -1.475 HAN  ARK 80 
ARK HAJ  HAJ  H 0 1 N N N 34.691 51.702 48.497 -7.886  6.881  0.250  HAJ  ARK 81 
ARK HAK  HAK  H 0 1 N N N 32.859 53.736 45.029 -10.414 -0.072 -2.078 HAK  ARK 82 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
ARK OAA CBH  SING N N 1  
ARK CBH OAG  DOUB N N 2  
ARK CBH CAV  SING N N 3  
ARK CAV CAX  SING N N 4  
ARK CAX CBQ  SING N N 5  
ARK CBQ CBJ  SING N N 6  
ARK CBQ NBE  SING N N 7  
ARK CBJ OAI  SING N N 8  
ARK CBJ OAC  DOUB N N 9  
ARK NBE CBK  SING N N 10 
ARK CBK OAD  DOUB N N 11 
ARK CBK N    SING N N 12 
ARK N   CA   SING N N 13 
ARK CA  C    SING N N 14 
ARK CA  CB   SING N N 15 
ARK C   OXT  SING N N 16 
ARK C   O    DOUB N N 17 
ARK CB  CAP  SING N N 18 
ARK CAP CAQ  SING N N 19 
ARK CAQ CAY  SING N N 20 
ARK CAY NBR  SING N N 21 
ARK NBR CAO  SING Y N 22 
ARK NBR NBB  SING Y N 23 
ARK CAO CBL  DOUB Y N 24 
ARK NBB NBA  DOUB Y N 25 
ARK NBA CBL  SING Y N 26 
ARK CBL CAZ  SING N N 27 
ARK CAZ OBG  SING N N 28 
ARK OBG CAU  SING N N 29 
ARK CAU CAT  SING N N 30 
ARK CAT OBF  SING N N 31 
ARK OBF CAS  SING N N 32 
ARK CAS CAR  SING N N 33 
ARK CAR NBC  SING N N 34 
ARK NBC CBN  SING N N 35 
ARK CBN CAM  SING Y N 36 
ARK CBN CBO  DOUB Y N 37 
ARK CAM CAL  DOUB Y N 38 
ARK CAL CBM  SING Y N 39 
ARK CBM NBS  SING N N 40 
ARK CBM CAN  DOUB Y N 41 
ARK NBS OAJ  SING N N 42 
ARK NBS OAE  DOUB N N 43 
ARK CAN CBO  SING Y N 44 
ARK CBO NBT  SING N N 45 
ARK NBT OAK  SING N N 46 
ARK NBT OAF  DOUB N N 47 
ARK OAA HAA  SING N N 48 
ARK CAV HAV1 SING N N 49 
ARK CAV HAV2 SING N N 50 
ARK CAX HAX1 SING N N 51 
ARK CAX HAX2 SING N N 52 
ARK CBQ HBQ  SING N N 53 
ARK NBE HBE  SING N N 54 
ARK OAI HAI  SING N N 55 
ARK N   H    SING N N 56 
ARK CA  HA   SING N N 57 
ARK CB  HB1C SING N N 58 
ARK CB  HB2C SING N N 59 
ARK OXT HB   SING N N 60 
ARK CAP HAP1 SING N N 61 
ARK CAP HAP2 SING N N 62 
ARK CAQ HAQ1 SING N N 63 
ARK CAQ HAQ2 SING N N 64 
ARK CAY HAY1 SING N N 65 
ARK CAY HAY2 SING N N 66 
ARK CAO HAO  SING N N 67 
ARK CAZ HAZ1 SING N N 68 
ARK CAZ HAZ2 SING N N 69 
ARK CAU HAU1 SING N N 70 
ARK CAU HAU2 SING N N 71 
ARK CAT HAT1 SING N N 72 
ARK CAT HAT2 SING N N 73 
ARK CAS HAS1 SING N N 74 
ARK CAS HAS2 SING N N 75 
ARK CAR HAR1 SING N N 76 
ARK CAR HAR2 SING N N 77 
ARK NBC HBC  SING N N 78 
ARK CAM HAM  SING N N 79 
ARK CAL HAL  SING N N 80 
ARK CAN HAN  SING N N 81 
ARK OAJ HAJ  SING N N 82 
ARK OAK HAK  SING N N 83 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
ARK SMILES           ACDLabs              10.04 "O=C(O)C(NC(=O)NC(C(=O)O)CCCCn1nnc(c1)COCCOCCNc2ccc([N+](=O)O)cc2[N+](=O)O)CCC(=O)O" 
ARK SMILES_CANONICAL CACTVS               3.352 "OC(=O)CC[C@H](NC(=O)N[C@@H](CCCCn1cc(COCCOCCNc2ccc(cc2[N+](O)=O)[N+](O)=O)nn1)C(O)=O)C(O)=O" 
ARK SMILES           CACTVS               3.352 "OC(=O)CC[CH](NC(=O)N[CH](CCCCn1cc(COCCOCCNc2ccc(cc2[N+](O)=O)[N+](O)=O)nn1)C(O)=O)C(O)=O" 
ARK SMILES_CANONICAL "OpenEye OEToolkits" 1.6.1 "c1cc(c(cc1[N+](=O)O)[N+](=O)O)NCCOCCOCc2cn(nn2)CCCC[C@@H](C(=O)O)NC(=O)N[C@@H](CCC(=O)O)C(=O)O" 
ARK SMILES           "OpenEye OEToolkits" 1.6.1 "c1cc(c(cc1[N+](=O)O)[N+](=O)O)NCCOCCOCc2cn(nn2)CCCCC(C(=O)O)NC(=O)NC(CCC(=O)O)C(=O)O" 
ARK InChI            InChI                1.03  
;InChI=1S/C25H34N8O13/c34-22(35)7-6-20(24(38)39)28-25(40)27-19(23(36)37)3-1-2-9-31-14-16(29-30-31)15-46-12-11-45-10-8-26-18-5-4-17(32(41)42)13-21(18)33(43)44/h4-5,13-14,19-20,26H,1-3,6-12,15H2,(H5-2,27,28,34,35,36,37,38,39,40,41,42,43,44)/p+2/t19-,20-/m0/s1
;
ARK InChIKey         InChI                1.03  LUGMXXDMBWQRGS-PMACEKPBSA-P 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
ARK "SYSTEMATIC NAME" ACDLabs              10.04 "N-({(1S)-5-[4-({2-[2-({2,4-bis[hydroxy(oxo)ammonio]phenyl}amino)ethoxy]ethoxy}methyl)-1H-1,2,3-triazol-1-yl]-1-carboxypentyl}carbamoyl)-L-glutamic acid"                                                   
ARK "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.6.1 "[4-[2-[2-[[1-[(5S)-5-[[(2S)-1,5-dihydroxy-1,5-dioxo-pentan-2-yl]carbamoylamino]-6-hydroxy-6-oxo-hexyl]-1,2,3-triazol-4-yl]methoxy]ethoxy]ethylamino]-3-(hydroxy-oxo-azaniumyl)phenyl]-hydroxy-oxo-azanium" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
ARK "Create component"     2010-05-14 EBI  
ARK "Modify aromatic_flag" 2011-06-04 RCSB 
ARK "Modify descriptor"    2011-06-04 RCSB 
# 
