data_A5K
# 
_chem_comp.id                                    A5K 
_chem_comp.name                                  "1-[3-chloranyl-5-(trifluoromethyl)pyridin-2-yl]-1,4-diazepane" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C11 H13 Cl F3 N3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-08-16 
_chem_comp.pdbx_modified_date                    2017-10-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        279.689 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A5K 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5ORP 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A5K C10 C1  C  0 1 Y N N 0.023  29.225 -22.091 1.594  -0.988 -0.071 C10 A5K 1  
A5K C9  C2  C  0 1 Y N N 0.186  30.220 -23.021 0.210  -0.981 -0.077 C9  A5K 2  
A5K C8  C3  C  0 1 N N N 1.642  32.656 -24.372 -2.366 1.018  -1.169 C8  A5K 3  
A5K C7  C4  C  0 1 N N N 0.657  33.473 -25.208 -3.727 0.622  -1.526 C7  A5K 4  
A5K C4  C5  C  0 1 N N N 1.716  30.879 -26.110 -2.364 0.826  1.216  C4  A5K 5  
A5K C5  C6  C  0 1 N N N 0.351  30.754 -26.782 -3.645 0.119  1.707  C5  A5K 6  
A5K C6  C7  C  0 1 N N N -0.426 32.055 -26.878 -4.599 -0.208 0.542  C6  A5K 7  
A5K C3  C8  C  0 1 Y N N 1.383  30.288 -23.765 -0.461 0.237  -0.002 C3  A5K 8  
A5K C2  C9  C  0 1 Y N N 2.182  28.444 -22.648 1.532  1.397  0.076  C2  A5K 9  
A5K C1  C10 C  0 1 Y N N 1.039  28.312 -21.885 2.262  0.227  0.009  C1  A5K 10 
A5K CL  CL1 CL 0 0 N N N -1.100 31.352 -23.286 -0.677 -2.470 -0.177 CL  A5K 11 
A5K C   C11 C  0 1 N N N 0.913  27.224 -20.879 3.768  0.268  0.025  C   A5K 12 
A5K F2  F1  F  0 1 N N N 0.354  26.116 -21.383 4.197  1.380  0.758  F2  A5K 13 
A5K F1  F2  F  0 1 N N N 0.154  27.574 -19.829 4.260  -0.900 0.618  F1  A5K 14 
A5K F   F3  F  0 1 N N N 2.094  26.846 -20.375 4.245  0.362  -1.287 F   A5K 15 
A5K N   N1  N  0 1 Y N N 2.357  29.400 -23.573 0.213  1.373  0.074  N   A5K 16 
A5K N1  N2  N  0 1 N N N 1.594  31.234 -24.700 -1.852 0.259  -0.007 N1  A5K 17 
A5K N2  N3  N  0 1 N N N -0.548 32.733 -25.586 -4.685 0.861  -0.422 N2  A5K 18 
A5K H1  H1  H  0 1 N N N -0.893 29.156 -21.524 2.142  -1.917 -0.124 H1  A5K 19 
A5K H2  H2  H  0 1 N N N 2.660  33.029 -24.559 -1.712 0.844  -2.023 H2  A5K 20 
A5K H3  H3  H  0 1 N N N 1.394  32.783 -23.308 -2.359 2.081  -0.929 H3  A5K 21 
A5K H4  H4  H  0 1 N N N 1.167  33.798 -26.127 -4.044 1.192  -2.399 H4  A5K 22 
A5K H5  H5  H  0 1 N N N 0.354  34.355 -24.625 -3.733 -0.439 -1.775 H5  A5K 23 
A5K H6  H6  H  0 1 N N N 2.242  29.917 -26.191 -2.586 1.880  1.049  H6  A5K 24 
A5K H7  H7  H  0 1 N N N 2.296  31.659 -26.625 -1.600 0.745  1.989  H7  A5K 25 
A5K H8  H8  H  0 1 N N N -0.251 30.036 -26.206 -3.368 -0.808 2.210  H8  A5K 26 
A5K H9  H9  H  0 1 N N N 0.504  30.369 -27.801 -4.159 0.768  2.416  H9  A5K 27 
A5K H10 H10 H  0 1 N N N 0.093  32.725 -27.580 -4.246 -1.109 0.040  H10 A5K 28 
A5K H11 H11 H  0 1 N N N -1.435 31.836 -27.258 -5.594 -0.399 0.945  H11 A5K 29 
A5K H12 H12 H  0 1 N N N 2.982  27.736 -22.491 2.048  2.344  0.139  H12 A5K 30 
A5K H13 H13 H  0 1 N N N -1.313 33.375 -25.635 -5.626 0.955  -0.774 H13 A5K 31 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A5K C6  C5  SING N N 1  
A5K C6  N2  SING N N 2  
A5K C5  C4  SING N N 3  
A5K C4  N1  SING N N 4  
A5K N2  C7  SING N N 5  
A5K C7  C8  SING N N 6  
A5K N1  C8  SING N N 7  
A5K N1  C3  SING N N 8  
A5K C3  N   DOUB Y N 9  
A5K C3  C9  SING Y N 10 
A5K N   C2  SING Y N 11 
A5K CL  C9  SING N N 12 
A5K C9  C10 DOUB Y N 13 
A5K C2  C1  DOUB Y N 14 
A5K C10 C1  SING Y N 15 
A5K C1  C   SING N N 16 
A5K F2  C   SING N N 17 
A5K C   F   SING N N 18 
A5K C   F1  SING N N 19 
A5K C10 H1  SING N N 20 
A5K C8  H2  SING N N 21 
A5K C8  H3  SING N N 22 
A5K C7  H4  SING N N 23 
A5K C7  H5  SING N N 24 
A5K C4  H6  SING N N 25 
A5K C4  H7  SING N N 26 
A5K C5  H8  SING N N 27 
A5K C5  H9  SING N N 28 
A5K C6  H10 SING N N 29 
A5K C6  H11 SING N N 30 
A5K C2  H12 SING N N 31 
A5K N2  H13 SING N N 32 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A5K InChI            InChI                1.03  "InChI=1S/C11H13ClF3N3/c12-9-6-8(11(13,14)15)7-17-10(9)18-4-1-2-16-3-5-18/h6-7,16H,1-5H2" 
A5K InChIKey         InChI                1.03  PKKLERQDFWUWNM-UHFFFAOYSA-N                                                               
A5K SMILES_CANONICAL CACTVS               3.385 "FC(F)(F)c1cnc(N2CCCNCC2)c(Cl)c1"                                                         
A5K SMILES           CACTVS               3.385 "FC(F)(F)c1cnc(N2CCCNCC2)c(Cl)c1"                                                         
A5K SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "c1c(cnc(c1Cl)N2CCCNCC2)C(F)(F)F"                                                         
A5K SMILES           "OpenEye OEToolkits" 2.0.6 "c1c(cnc(c1Cl)N2CCCNCC2)C(F)(F)F"                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A5K "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "1-[3-chloranyl-5-(trifluoromethyl)pyridin-2-yl]-1,4-diazepane" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A5K "Create component" 2017-08-16 EBI  
A5K "Initial release"  2017-11-01 RCSB 
# 
