data_A1ICK
# 
_chem_comp.id                                    A1ICK 
_chem_comp.name                                  "(2~{S})-3-[3-[[4-[bis(fluoranyl)methyl]-3-cyano-6-[(3~{S})-3-(dimethylamino)pyrrolidin-1-yl]pyridin-2-yl]amino]-4-methylsulfanyl-phenyl]-2-methyl-propanoic acid" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H29 F2 N5 O2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-06-03 
_chem_comp.pdbx_modified_date                    2024-08-30 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        489.581 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1ICK 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        9FHE 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1ICK N1   N1  N 0 1 N N N N N N -22.594 -29.459 12.245 -1.447 2.237  1.323  N1   A1ICK 1  
A1ICK N3   N2  N 0 1 N N N N N N -22.219 -26.073 15.394 -0.946 -2.022 -0.558 N3   A1ICK 2  
A1ICK C7   C1  C 0 1 Y N N N N N -23.208 -28.390 12.865 -1.995 1.187  0.604  C7   A1ICK 3  
A1ICK C8   C2  C 0 1 N N N N N N -24.828 -25.128 14.923 -3.589 -1.996 -1.548 C8   A1ICK 4  
A1ICK C10  C3  C 0 1 N N N N N N -26.568 -26.631 13.135 -5.269 0.320  -1.072 C10  A1ICK 5  
A1ICK C13  C4  C 0 1 Y N N N N N -25.115 -26.990 13.321 -3.852 0.245  -0.565 C13  A1ICK 6  
A1ICK C15  C5  C 0 1 N N N N N N -19.552 -32.282 12.845 2.044  5.480  1.345  C15  A1ICK 7  
A1ICK C17  C6  C 0 1 N N N N N N -21.163 -29.748 12.361 0.031  2.263  1.184  C17  A1ICK 8  
A1ICK C20  C7  C 0 1 N N S N N N -20.936 -30.787 11.273 0.398  3.718  1.569  C20  A1ICK 9  
A1ICK C21  C8  C 0 1 Y N N N N N -20.913 -26.189 15.924 0.343  -2.084 -0.015 C21  A1ICK 10 
A1ICK C22  C9  C 0 1 Y N N N N N -20.572 -25.374 17.014 0.701  -3.142 0.821  C22  A1ICK 11 
A1ICK C24  C10 C 0 1 Y N N N N N -18.393 -26.381 17.071 2.896  -2.204 1.059  C24  A1ICK 12 
A1ICK C26  C11 C 0 1 Y N N N N N -19.972 -27.094 15.426 1.270  -1.096 -0.312 C26  A1ICK 13 
A1ICK C28  C12 C 0 1 N N N N N N -22.444 -25.232 19.072 0.465  -5.512 2.290  C28  A1ICK 14 
A1ICK C11  C13 C 0 1 Y N N N N N -24.548 -28.060 12.634 -3.308 1.281  0.146  C11  A1ICK 15 
A1ICK C12  C14 C 0 1 Y N N N N N -24.314 -26.270 14.218 -3.062 -0.888 -0.809 C12  A1ICK 16 
A1ICK C14  C15 C 0 1 N N N N N N -23.281 -30.424 11.375 -1.924 3.539  0.806  C14  A1ICK 17 
A1ICK C16  C16 C 0 1 N N N N N N -18.437 -30.990 11.087 1.641  3.958  -0.495 C16  A1ICK 18 
A1ICK C18  C17 C 0 1 N N N N N N -22.264 -31.544 11.207 -0.764 4.539  0.965  C18  A1ICK 19 
A1ICK C23  C18 C 0 1 Y N N N N N -19.306 -25.478 17.578 1.981  -3.197 1.355  C23  A1ICK 20 
A1ICK C25  C19 C 0 1 Y N N N N N -18.703 -27.201 15.997 2.543  -1.159 0.225  C25  A1ICK 21 
A1ICK C29  C20 C 0 1 N N N N N N -17.752 -28.312 15.610 3.547  -0.080 -0.093 C29  A1ICK 22 
A1ICK C30  C21 C 0 1 N N S N N N -17.652 -28.672 14.103 4.465  -0.555 -1.222 C30  A1ICK 23 
A1ICK C31  C22 C 0 1 N N N N N N -17.216 -27.524 13.196 5.467  0.524  -1.541 C31  A1ICK 24 
A1ICK C32  C23 C 0 1 N N N N N N -16.578 -29.736 13.880 5.201  -1.821 -0.781 C32  A1ICK 25 
A1ICK C9   C24 C 0 1 Y N N N N N -22.965 -26.665 14.414 -1.744 -0.916 -0.323 C9   A1ICK 26 
A1ICK F5   F1  F 0 1 N N N N N N -26.690 -25.395 12.586 -6.144 0.473  0.009  F5   A1ICK 27 
A1ICK F6   F2  F 0 1 N N N N N N -27.214 -26.600 14.333 -5.398 1.413  -1.935 F6   A1ICK 28 
A1ICK N19  N3  N 0 1 N N N N N N -19.705 -31.670 11.480 1.679  4.108  0.966  N19  A1ICK 29 
A1ICK N2   N4  N 0 1 N N N N N N -25.282 -24.236 15.475 -4.007 -2.875 -2.133 N2   A1ICK 30 
A1ICK N4   N5  N 0 1 Y N N N N N -22.456 -27.696 13.729 -1.262 0.111  0.360  N4   A1ICK 31 
A1ICK O33  O1  O 0 1 N N N N N N -16.251 -26.822 13.579 5.429  1.578  -0.951 O33  A1ICK 32 
A1ICK O34  O2  O 0 1 N N N N N N -17.821 -27.395 12.100 6.402  0.314  -2.481 O34  A1ICK 33 
A1ICK S27  S1  S 0 1 N N N N N N -21.786 -24.290 17.701 -0.468 -4.405 1.198  S27  A1ICK 34 
A1ICK H3   H1  H 0 1 N N N N N N -22.740 -25.362 15.866 -1.280 -2.755 -1.098 H3   A1ICK 35 
A1ICK H10  H2  H 0 1 N N N N N N -27.025 -27.385 12.478 -5.512 -0.597 -1.609 H10  A1ICK 36 
A1ICK H15C H3  H 0 0 N N N N N N -20.489 -32.782 13.130 2.048  5.568  2.431  H15C A1ICK 37 
A1ICK H15A H4  H 0 0 N N N N N N -18.735 -33.018 12.827 3.036  5.712  0.958  H15A A1ICK 38 
A1ICK H15B H5  H 0 0 N N N N N N -19.320 -31.494 13.576 1.318  6.177  0.927  H15B A1ICK 39 
A1ICK H17A H6  H 0 0 N N N N N N -20.561 -28.846 12.178 0.494  1.555  1.871  H17A A1ICK 40 
A1ICK H17B H7  H 0 0 N N N N N N -20.921 -30.155 13.354 0.325  2.051  0.156  H17B A1ICK 41 
A1ICK H20  H8  H 0 1 N N N N N N -20.808 -30.253 10.320 0.433  3.833  2.653  H20  A1ICK 42 
A1ICK H24  H9  H 0 1 N N N N N N -17.414 -26.450 17.522 3.892  -2.248 1.475  H24  A1ICK 43 
A1ICK H26  H10 H 0 1 N N N N N N -20.231 -27.721 14.586 0.999  -0.278 -0.962 H26  A1ICK 44 
A1ICK H28A H11 H 0 0 N N N N N N -23.222 -24.644 19.582 0.788  -4.963 3.174  H28A A1ICK 45 
A1ICK H28B H12 H 0 0 N N N N N N -22.880 -26.170 18.697 -0.170 -6.345 2.592  H28B A1ICK 46 
A1ICK H28C H13 H 0 0 N N N N N N -21.635 -25.462 19.781 1.338  -5.894 1.761  H28C A1ICK 47 
A1ICK H11  H14 H 0 1 N N N N N N -25.136 -28.630 11.930 -3.893 2.166  0.350  H11  A1ICK 48 
A1ICK H14A H15 H 0 0 N N N N N N -24.200 -30.797 11.851 -2.192 3.445  -0.246 H14A A1ICK 49 
A1ICK H14B H16 H 0 0 N N N N N N -23.529 -29.970 10.404 -2.785 3.875  1.383  H14B A1ICK 50 
A1ICK H16B H17 H 0 0 N N N N N N -18.554 -30.544 10.088 2.652  4.034  -0.895 H16B A1ICK 51 
A1ICK H16C H18 H 0 0 N N N N N N -18.203 -30.200 11.816 1.221  2.985  -0.749 H16C A1ICK 52 
A1ICK H16A H19 H 0 0 N N N N N N -17.618 -31.724 11.067 1.020  4.745  -0.924 H16A A1ICK 53 
A1ICK H18A H20 H 0 0 N N N N N N -22.344 -32.281 12.020 -1.049 5.345  1.640  H18A A1ICK 54 
A1ICK H18B H21 H 0 0 N N N N N N -22.386 -32.052 10.239 -0.477 4.942  -0.007 H18B A1ICK 55 
A1ICK H23  H22 H 0 1 N N N N N N -19.036 -24.851 18.415 2.261  -4.014 2.003  H23  A1ICK 56 
A1ICK H29A H23 H 0 0 N N N N N N -16.747 -28.019 15.947 3.023  0.822  -0.407 H29A A1ICK 57 
A1ICK H29B H24 H 0 0 N N N N N N -18.068 -29.219 16.146 4.142  0.135  0.794  H29B A1ICK 58 
A1ICK H30  H25 H 0 1 N N N N N N -18.624 -29.058 13.761 3.869  -0.771 -2.108 H30  A1ICK 59 
A1ICK H32C H26 H 0 0 N N N N N N -16.520 -29.980 12.809 5.855  -2.160 -1.584 H32C A1ICK 60 
A1ICK H32A H27 H 0 0 N N N N N N -15.605 -29.353 14.222 5.797  -1.605 0.106  H32A A1ICK 61 
A1ICK H32B H28 H 0 0 N N N N N N -16.836 -30.642 14.449 4.476  -2.602 -0.549 H32B A1ICK 62 
A1ICK H1   H30 H 0 1 N N N N N N -17.433 -26.682 11.606 6.993  1.052  -2.685 H1   A1ICK 63 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1ICK N1  C7   SING N N 1  
A1ICK N1  C14  SING N N 2  
A1ICK N1  C17  SING N N 3  
A1ICK N2  C8   TRIP N N 4  
A1ICK N3  C9   SING N N 5  
A1ICK N3  C21  SING N N 6  
A1ICK N4  C7   DOUB Y N 7  
A1ICK N4  C9   SING Y N 8  
A1ICK F5  C10  SING N N 9  
A1ICK F6  C10  SING N N 10 
A1ICK C7  C11  SING Y N 11 
A1ICK C8  C12  SING N N 12 
A1ICK C9  C12  DOUB Y N 13 
A1ICK C10 C13  SING N N 14 
A1ICK C11 C13  DOUB Y N 15 
A1ICK C12 C13  SING Y N 16 
A1ICK C14 C18  SING N N 17 
A1ICK C15 N19  SING N N 18 
A1ICK C16 N19  SING N N 19 
A1ICK C17 C20  SING N N 20 
A1ICK C18 C20  SING N N 21 
A1ICK C20 N19  SING N N 22 
A1ICK C21 C22  DOUB Y N 23 
A1ICK C21 C26  SING Y N 24 
A1ICK C22 C23  SING Y N 25 
A1ICK C22 S27  SING N N 26 
A1ICK C23 C24  DOUB Y N 27 
A1ICK C24 C25  SING Y N 28 
A1ICK C25 C26  DOUB Y N 29 
A1ICK C25 C29  SING N N 30 
A1ICK S27 C28  SING N N 31 
A1ICK C29 C30  SING N N 32 
A1ICK C30 C31  SING N N 33 
A1ICK C30 C32  SING N N 34 
A1ICK C31 O33  DOUB N N 35 
A1ICK C31 O34  SING N N 36 
A1ICK N3  H3   SING N N 37 
A1ICK C10 H10  SING N N 38 
A1ICK C15 H15C SING N N 39 
A1ICK C15 H15A SING N N 40 
A1ICK C15 H15B SING N N 41 
A1ICK C17 H17A SING N N 42 
A1ICK C17 H17B SING N N 43 
A1ICK C20 H20  SING N N 44 
A1ICK C24 H24  SING N N 45 
A1ICK C26 H26  SING N N 46 
A1ICK C28 H28A SING N N 47 
A1ICK C28 H28B SING N N 48 
A1ICK C28 H28C SING N N 49 
A1ICK C11 H11  SING N N 50 
A1ICK C14 H14A SING N N 51 
A1ICK C14 H14B SING N N 52 
A1ICK C16 H16B SING N N 53 
A1ICK C16 H16C SING N N 54 
A1ICK C16 H16A SING N N 55 
A1ICK C18 H18A SING N N 56 
A1ICK C18 H18B SING N N 57 
A1ICK C23 H23  SING N N 58 
A1ICK C29 H29A SING N N 59 
A1ICK C29 H29B SING N N 60 
A1ICK C30 H30  SING N N 61 
A1ICK C32 H32C SING N N 62 
A1ICK C32 H32A SING N N 63 
A1ICK C32 H32B SING N N 64 
A1ICK O34 H1   SING N N 65 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1ICK InChI            InChI                1.06  "InChI=1S/C24H29F2N5O2S/c1-14(24(32)33)9-15-5-6-20(34-4)19(10-15)28-23-18(12-27)17(22(25)26)11-21(29-23)31-8-7-16(13-31)30(2)3/h5-6,10-11,14,16,22H,7-9,13H2,1-4H3,(H,28,29)(H,32,33)/t14-,16-/m0/s1" 
A1ICK InChIKey         InChI                1.06  LPDOIXPRZOWBJV-HOCLYGCPSA-N                                                                                                                                                                           
A1ICK SMILES_CANONICAL CACTVS               3.385 "CSc1ccc(C[C@H](C)C(O)=O)cc1Nc2nc(cc(C(F)F)c2C#N)N3CC[C@@H](C3)N(C)C"                                                                                                                                 
A1ICK SMILES           CACTVS               3.385 "CSc1ccc(C[CH](C)C(O)=O)cc1Nc2nc(cc(C(F)F)c2C#N)N3CC[CH](C3)N(C)C"                                                                                                                                    
A1ICK SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@@H](Cc1ccc(c(c1)Nc2c(c(cc(n2)N3CC[C@@H](C3)N(C)C)C(F)F)C#N)SC)C(=O)O"                                                                                                                            
A1ICK SMILES           "OpenEye OEToolkits" 2.0.7 "CC(Cc1ccc(c(c1)Nc2c(c(cc(n2)N3CCC(C3)N(C)C)C(F)F)C#N)SC)C(=O)O"                                                                                                                                      
# 
_pdbx_chem_comp_identifier.comp_id           A1ICK 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "(2~{S})-3-[3-[[4-[bis(fluoranyl)methyl]-3-cyano-6-[(3~{S})-3-(dimethylamino)pyrrolidin-1-yl]pyridin-2-yl]amino]-4-methylsulfanyl-phenyl]-2-methyl-propanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1ICK "Create component" 2024-06-03 PDBE 
A1ICK "Initial release"  2024-09-04 RCSB 
# 
