data_A0K
#

_chem_comp.id                                   A0K
_chem_comp.name                                 "1,3-dihydroxypropan-2-yl alpha-D-glucopyranoside"
_chem_comp.type                                 D-saccharide
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C9 H18 O8"
_chem_comp.mon_nstd_parent_comp_id              GLC
_chem_comp.pdbx_synonyms                        
;(2~{S},3~{R},4~{S},5~{S},6~{R})-2-[1,3-bis(oxidanyl)propan-2-yloxy]-6-(hydroxymethyl)oxane-3,4,5-triol;
1,3-dihydroxypropan-2-yl alpha-D-glucoside; 1,3-dihydroxypropan-2-yl D-glucoside; 1,3-dihydroxypropan-2-yl glucoside
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2017-08-08
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       254.234
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    A0K
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5ONT
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 EBI
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  A0K  "(2~{S},3~{R},4~{S},5~{S},6~{R})-2-[1,3-bis(oxidanyl)propan-2-yloxy]-6-(hydroxymethyl)oxane-3,4,5-triol"  PDB  ?  
2  A0K  "1,3-dihydroxypropan-2-yl alpha-D-glucoside"                                                              PDB  ?  
3  A0K  "1,3-dihydroxypropan-2-yl D-glucoside"                                                                    PDB  ?  
4  A0K  "1,3-dihydroxypropan-2-yl glucoside"                                                                      PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
A0K  C10  C10  C  0  1  N  N  N  33.950  22.910  31.248  -3.309  -1.260  -0.004  C10  A0K   1  
A0K  C6   C01  C  0  1  N  N  N  36.201  18.470  33.928   1.171   2.694  -0.341  C6   A0K   2  
A0K  C5   C02  C  0  1  N  N  R  35.600  19.878  34.163   0.877   1.208  -0.122  C5   A0K   3  
A0K  C4   C03  C  0  1  N  N  S  36.224  20.547  35.413   2.153   0.498   0.338  C4   A0K   4  
A0K  C3   C04  C  0  1  N  N  S  35.413  21.797  35.794   1.867  -0.998   0.497  C3   A0K   5  
A0K  C2   C05  C  0  1  N  N  R  33.914  21.578  35.828   1.342  -1.550  -0.832  C2   A0K   6  
A0K  C1   C06  C  0  1  N  N  S  33.480  20.963  34.487   0.097  -0.761  -1.247  C1   A0K   7  
A0K  C09  C09  C  0  1  N  N  N  33.520  21.692  32.095  -2.205  -0.433  -0.665  C09  A0K   8  
A0K  C12  C12  C  0  1  N  N  N  32.057  21.347  31.860  -2.332   1.028  -0.229  C12  A0K   9  
A0K  O5   O07  O  0  1  N  N  N  34.170  19.731  34.256   0.426   0.626  -1.347  O5   A0K  10  
A0K  O1   O08  O  0  1  N  N  N  33.722  21.950  33.475  -0.928  -0.939  -0.268  O1   A0K  11  
A0K  O11  O11  O  0  1  N  N  N  35.333  23.175  31.325  -3.256  -1.082   1.412  O11  A0K  12  
A0K  O13  O13  O  0  1  N  N  N  31.679  21.998  30.687  -2.322   1.102   1.198  O13  A0K  13  
A0K  O2   O15  O  0  1  N  N  N  33.209  22.784  36.045   1.003  -2.930  -0.675  O2   A0K  14  
A0K  O3   O16  O  0  1  N  N  N  35.852  22.392  36.989   3.070  -1.680   0.856  O3   A0K  15  
A0K  O4   O17  O  0  1  N  N  N  37.581  20.860  35.108   2.575   1.039   1.592  O4   A0K  16  
A0K  O6   O18  O  0  1  N  N  N  36.000  17.622  35.045  -0.043   3.377  -0.659  O6   A0K  17  
A0K  H1A  H1   H  0  1  N  N  N  33.403  23.795  31.605  -4.280  -0.932  -0.375  H1A  A0K  18  
A0K  H2A  H2   H  0  1  N  N  N  33.688  22.716  30.197  -3.166  -2.314  -0.243  H2A  A0K  19  
A0K  H61  H3   H  0  1  N  N  N  35.720  18.020  33.047   1.599   3.117   0.568  H61  A0K  20  
A0K  H62  H4   H  0  1  N  N  N  37.281  18.569  33.745   1.878   2.807  -1.163  H62  A0K  21  
A0K  H5   H5   H  0  1  N  N  N  35.845  20.500  33.289   0.105   1.098   0.639  H5   A0K  22  
A0K  H4   H6   H  0  1  N  N  N  36.180  19.833  36.248   2.938   0.642  -0.404  H4   A0K  23  
A0K  H3   H7   H  0  1  N  N  N  35.592  22.523  34.987   1.117  -1.145   1.275  H3   A0K  24  
A0K  H2   H8   H  0  1  N  N  N  33.683  20.859  36.628   2.111  -1.449  -1.597  H2   A0K  25  
A0K  H1   H9   H  0  1  N  N  N  32.399  20.765  34.544  -0.256  -1.122  -2.213  H1   A0K  26  
A0K  H10  H10  H  0  1  N  N  N  34.131  20.831  31.786  -2.300  -0.499  -1.749  H10  A0K  27  
A0K  H11  H11  H  0  1  N  N  N  31.444  21.698  32.703  -1.494   1.600  -0.628  H11  A0K  28  
A0K  H12  H12  H  0  1  N  N  N  31.937  20.260  31.746  -3.266   1.440  -0.609  H12  A0K  29  
A0K  H13  H13  H  0  1  N  N  N  35.542  23.930  30.788  -3.929  -1.578   1.897  H13  A0K  30  
A0K  H14  H14  H  0  1  N  N  N  30.767  21.810  30.500  -2.400   2.001   1.546  H14  A0K  31  
A0K  HO2  H15  H  0  1  N  Y  N  33.477  23.164  36.873   0.663  -3.345  -1.480  HO2  A0K  32  
A0K  HO3  H16  H  0  1  N  Y  N  35.320  23.156  37.177   2.962  -2.634   0.973  HO3  A0K  33  
A0K  HO4  H17  H  0  1  N  Y  N  37.988  21.273  35.861   3.379   0.635   1.944  HO4  A0K  34  
A0K  HO6  H18  H  0  1  N  Y  N  36.379  16.769  34.868   0.067   4.326  -0.811  HO6  A0K  35  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
A0K  O13  C12  SING  N  N   1  
A0K  C10  O11  SING  N  N   2  
A0K  C10  C09  SING  N  N   3  
A0K  C12  C09  SING  N  N   4  
A0K  C09  O1   SING  N  N   5  
A0K  O1   C1   SING  N  N   6  
A0K  C6   C5   SING  N  N   7  
A0K  C6   O6   SING  N  N   8  
A0K  C5   O5   SING  N  N   9  
A0K  C5   C4   SING  N  N  10  
A0K  O5   C1   SING  N  N  11  
A0K  C1   C2   SING  N  N  12  
A0K  O4   C4   SING  N  N  13  
A0K  C4   C3   SING  N  N  14  
A0K  C3   C2   SING  N  N  15  
A0K  C3   O3   SING  N  N  16  
A0K  C2   O2   SING  N  N  17  
A0K  C10  H1A  SING  N  N  18  
A0K  C10  H2A  SING  N  N  19  
A0K  C6   H61  SING  N  N  20  
A0K  C6   H62  SING  N  N  21  
A0K  C5   H5   SING  N  N  22  
A0K  C4   H4   SING  N  N  23  
A0K  C3   H3   SING  N  N  24  
A0K  C2   H2   SING  N  N  25  
A0K  C1   H1   SING  N  N  26  
A0K  C09  H10  SING  N  N  27  
A0K  C12  H11  SING  N  N  28  
A0K  C12  H12  SING  N  N  29  
A0K  O11  H13  SING  N  N  30  
A0K  O13  H14  SING  N  N  31  
A0K  O2   HO2  SING  N  N  32  
A0K  O3   HO3  SING  N  N  33  
A0K  O4   HO4  SING  N  N  34  
A0K  O6   HO6  SING  N  N  35  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
A0K  InChI             InChI                 1.03   "InChI=1S/C9H18O8/c10-1-4(2-11)16-9-8(15)7(14)6(13)5(3-12)17-9/h4-15H,1-3H2/t5-,6-,7+,8-,9+/m1/s1"  
A0K  InChIKey          InChI                 1.03   AQTKXCPRNZDOJU-ZEBDFXRSSA-N  
A0K  SMILES_CANONICAL  CACTVS                3.385  "OCC(CO)O[C@H]1O[C@H](CO)[C@@H](O)[C@H](O)[C@H]1O"  
A0K  SMILES            CACTVS                3.385  "OCC(CO)O[CH]1O[CH](CO)[CH](O)[CH](O)[CH]1O"  
A0K  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "C([C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)OC(CO)CO)O)O)O)O"  
A0K  SMILES            "OpenEye OEToolkits"  2.0.6  "C(C1C(C(C(C(O1)OC(CO)CO)O)O)O)O"  
#
_pdbx_chem_comp_identifier.comp_id          A0K
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.6
_pdbx_chem_comp_identifier.identifier       "(2~{S},3~{R},4~{S},5~{S},6~{R})-2-[1,3-bis(oxidanyl)propan-2-yloxy]-6-(hydroxymethyl)oxane-3,4,5-triol"
#
_pdbx_chem_comp_related.comp_id            A0K
_pdbx_chem_comp_related.related_comp_id    GLC
_pdbx_chem_comp_related.relationship_type  "Carbohydrate core"
_pdbx_chem_comp_related.details            ?
#   #
loop_
_pdbx_chem_comp_atom_related.ordinal
_pdbx_chem_comp_atom_related.comp_id
_pdbx_chem_comp_atom_related.atom_id
_pdbx_chem_comp_atom_related.related_comp_id
_pdbx_chem_comp_atom_related.related_atom_id
_pdbx_chem_comp_atom_related.related_type
 1  A0K  C6   GLC  C6   "Carbohydrate core"  
 2  A0K  C5   GLC  C5   "Carbohydrate core"  
 3  A0K  C4   GLC  C4   "Carbohydrate core"  
 4  A0K  C3   GLC  C3   "Carbohydrate core"  
 5  A0K  C2   GLC  C2   "Carbohydrate core"  
 6  A0K  C1   GLC  C1   "Carbohydrate core"  
 7  A0K  O5   GLC  O5   "Carbohydrate core"  
 8  A0K  O1   GLC  O1   "Carbohydrate core"  
 9  A0K  O2   GLC  O2   "Carbohydrate core"  
10  A0K  O3   GLC  O3   "Carbohydrate core"  
11  A0K  O4   GLC  O4   "Carbohydrate core"  
12  A0K  O6   GLC  O6   "Carbohydrate core"  
13  A0K  HO2  GLC  HO2  "Carbohydrate core"  
14  A0K  HO3  GLC  HO3  "Carbohydrate core"  
15  A0K  HO4  GLC  HO4  "Carbohydrate core"  
16  A0K  HO6  GLC  HO6  "Carbohydrate core"  
17  A0K  H61  GLC  H61  "Carbohydrate core"  
18  A0K  H62  GLC  H62  "Carbohydrate core"  
19  A0K  H5   GLC  H5   "Carbohydrate core"  
20  A0K  H4   GLC  H4   "Carbohydrate core"  
21  A0K  H3   GLC  H3   "Carbohydrate core"  
22  A0K  H2   GLC  H2   "Carbohydrate core"  
23  A0K  H1   GLC  H1   "Carbohydrate core"  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
A0K  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
A0K  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
A0K  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
A0K  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
A0K  "Create component"          2017-08-08  EBI   
A0K  "Initial release"           2018-08-29  RCSB  
A0K  "Other modification"        2020-07-03  RCSB  
A0K  "Modify parent residue"     2020-07-17  RCSB  
A0K  "Modify name"               2020-07-17  RCSB  
A0K  "Modify synonyms"           2020-07-17  RCSB  
A0K  "Modify internal type"      2020-07-17  RCSB  
A0K  "Modify linking type"       2020-07-17  RCSB  
A0K  "Modify atom id"            2020-07-17  RCSB  
A0K  "Modify component atom id"  2020-07-17  RCSB  
A0K  "Modify leaving atom flag"  2020-07-17  RCSB  
##
