data_9YK
# 
_chem_comp.id                                    9YK 
_chem_comp.name                                  "2-[2-[[2,3-bis(oxidanyl)phenyl]methyl-(2-hydroxy-2-oxoethyl)amino]ethyl-[(2-methylsulfanylphenyl)methyl]amino]ethanoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C21 H26 N2 O6 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-08-02 
_chem_comp.pdbx_modified_date                    2017-12-08 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        434.506 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9YK 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5ON1 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9YK OAX O1  O 0 1 N N N 3.070  0.037   34.979 -7.001 0.625  -0.501 OAX 9YK 1  
9YK CAR C1  C 0 1 Y N N 3.784  -0.635  34.023 -5.876 1.135  0.068  CAR 9YK 2  
9YK CAS C2  C 0 1 Y N N 3.311  -1.875  33.640 -4.792 0.304  0.337  CAS 9YK 3  
9YK OAY O2  O 0 1 N N N 2.181  -2.325  34.237 -4.856 -1.019 0.032  OAY 9YK 4  
9YK CAQ C3  C 0 1 Y N N 4.938  -0.138  33.436 -5.804 2.484  0.375  CAQ 9YK 5  
9YK CAE C4  C 0 1 Y N N 5.603  -0.893  32.470 -4.659 3.001  0.953  CAE 9YK 6  
9YK CAF C5  C 0 1 Y N N 5.113  -2.143  32.091 -3.585 2.175  1.225  CAF 9YK 7  
9YK CAG C6  C 0 1 Y N N 3.958  -2.651  32.679 -3.649 0.829  0.917  CAG 9YK 8  
9YK CAH C7  C 0 1 N N N 3.472  -3.898  32.265 -2.476 -0.069 1.215  CAH 9YK 9  
9YK N   N1  N 0 1 N N N 3.272  -4.847  33.363 -1.601 -0.140 0.037  N   9YK 10 
9YK CA  C8  C 0 1 N N N 4.578  -5.113  33.985 -2.204 -0.968 -1.016 CA  9YK 11 
9YK C   C9  C 0 1 N N N 4.389  -5.304  35.491 -2.364 -2.380 -0.516 C   9YK 12 
9YK OXT O3  O 0 1 N N N 5.347  -5.783  36.131 -2.814 -3.338 -1.342 OXT 9YK 13 
9YK O   O4  O 0 1 N N N 3.285  -4.984  35.966 -2.088 -2.651 0.629  O   9YK 14 
9YK CAJ C10 C 0 1 N N N 2.756  -6.088  32.751 -0.268 -0.640 0.401  CAJ 9YK 15 
9YK CAK C11 C 0 1 N N N 2.087  -7.027  33.763 0.718  -0.330 -0.727 CAK 9YK 16 
9YK NAL N2  N 0 1 N N N 0.958  -6.409  34.487 2.032  -0.899 -0.400 NAL 9YK 17 
9YK CAT C12 C 0 1 N N N -0.298 -6.413  33.707 1.978  -2.367 -0.377 CAT 9YK 18 
9YK CAZ C13 C 0 1 N N N -0.398 -5.175  32.796 3.201  -2.903 0.322  CAZ 9YK 19 
9YK OBD O5  O 0 1 N N N 0.224  -4.145  33.144 3.423  -4.226 0.365  OBD 9YK 20 
9YK OBA O6  O 0 1 N N N -1.090 -5.288  31.760 3.981  -2.142 0.844  OBA 9YK 21 
9YK CAM C14 C 0 1 N N N 0.767  -7.007  35.831 3.059  -0.425 -1.336 CAM 9YK 22 
9YK CAN C15 C 0 1 Y N N 0.084  -8.234  35.939 3.219  1.067  -1.193 CAN 9YK 23 
9YK CAO C16 C 0 1 Y N N 0.704  -9.434  35.589 2.639  1.916  -2.115 CAO 9YK 24 
9YK CAP C17 C 0 1 Y N N 0.035  -10.646 35.718 2.784  3.285  -1.985 CAP 9YK 25 
9YK CAW C18 C 0 1 Y N N -1.257 -10.682 36.222 3.511  3.809  -0.931 CAW 9YK 26 
9YK CAV C19 C 0 1 Y N N -1.875 -9.495  36.592 4.095  2.966  -0.006 CAV 9YK 27 
9YK CAU C20 C 0 1 Y N N -1.210 -8.279  36.462 3.945  1.590  -0.130 CAU 9YK 28 
9YK SBB S1  S 0 1 N N N -2.049 -6.798  36.950 4.681  0.511  1.052  SBB 9YK 29 
9YK CBE C21 C 0 1 N N N -3.411 -6.837  35.808 5.492  1.657  2.201  CBE 9YK 30 
9YK H1  H1  H 0 1 N N N 2.320  -0.485  35.240 -7.655 0.309  0.137  H1  9YK 31 
9YK H2  H2  H 0 1 N N N 1.873  -1.678  34.861 -4.640 -1.222 -0.889 H2  9YK 32 
9YK H3  H3  H 0 1 N N N 5.320  0.830   33.726 -6.641 3.132  0.162  H3  9YK 33 
9YK H4  H4  H 0 1 N N N 6.502  -0.508  32.013 -4.604 4.053  1.192  H4  9YK 34 
9YK H5  H5  H 0 1 N N N 5.632  -2.719  31.339 -2.693 2.583  1.677  H5  9YK 35 
9YK H6  H6  H 0 1 N N N 2.507  -3.744  31.759 -1.916 0.333  2.060  H6  9YK 36 
9YK H7  H7  H 0 1 N N N 4.192  -4.333  31.557 -2.836 -1.068 1.462  H7  9YK 37 
9YK H9  H9  H 0 1 N N N 5.013  -6.025  33.550 -3.181 -0.563 -1.282 H9  9YK 38 
9YK H10 H10 H 0 1 N N N 5.252  -4.263  33.804 -1.558 -0.964 -1.895 H10 9YK 39 
9YK H11 H11 H 0 1 N N N 5.106  -5.868  37.046 -2.900 -4.228 -0.976 H11 9YK 40 
9YK H12 H12 H 0 1 N N N 2.017  -5.818  31.983 0.064  -0.154 1.318  H12 9YK 41 
9YK H13 H13 H 0 1 N N N 3.595  -6.621  32.281 -0.314 -1.718 0.557  H13 9YK 42 
9YK H14 H14 H 0 1 N N N 1.713  -7.910  33.224 0.354  -0.766 -1.658 H14 9YK 43 
9YK H15 H15 H 0 1 N N N 2.842  -7.340  34.499 0.809  0.750  -0.844 H15 9YK 44 
9YK H17 H17 H 0 1 N N N -1.151 -6.416  34.402 1.084  -2.690 0.157  H17 9YK 45 
9YK H18 H18 H 0 1 N N N -0.330 -7.319  33.084 1.948  -2.746 -1.398 H18 9YK 46 
9YK H19 H19 H 0 1 N N N 0.090  -3.460  32.499 4.221  -4.523 0.824  H19 9YK 47 
9YK H20 H20 H 0 1 N N N 1.767  -7.155  36.264 4.007  -0.914 -1.114 H20 9YK 48 
9YK H21 H21 H 0 1 N N N 0.211  -6.274  36.435 2.758  -0.662 -2.357 H21 9YK 49 
9YK H22 H22 H 0 1 N N N 1.716  -9.421  35.213 2.071  1.510  -2.940 H22 9YK 50 
9YK H23 H23 H 0 1 N N N 0.523  -11.564 35.425 2.330  3.946  -2.707 H23 9YK 51 
9YK H24 H24 H 0 1 N N N -1.777 -11.623 36.325 3.623  4.879  -0.832 H24 9YK 52 
9YK H25 H25 H 0 1 N N N -2.881 -9.515  36.984 4.662  3.376  0.817  H25 9YK 53 
9YK H26 H26 H 0 1 N N N -4.056 -5.961  35.975 6.228  2.253  1.662  H26 9YK 54 
9YK H27 H27 H 0 1 N N N -3.026 -6.817  34.778 4.745  2.317  2.644  H27 9YK 55 
9YK H28 H28 H 0 1 N N N -3.994 -7.757  35.964 5.989  1.091  2.989  H28 9YK 56 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9YK OBA CAZ DOUB N N 1  
9YK CAF CAE DOUB Y N 2  
9YK CAF CAG SING Y N 3  
9YK CAH CAG SING N N 4  
9YK CAH N   SING N N 5  
9YK CAE CAQ SING Y N 6  
9YK CAG CAS DOUB Y N 7  
9YK CAJ N   SING N N 8  
9YK CAJ CAK SING N N 9  
9YK CAZ OBD SING N N 10 
9YK CAZ CAT SING N N 11 
9YK N   CA  SING N N 12 
9YK CAQ CAR DOUB Y N 13 
9YK CAS CAR SING Y N 14 
9YK CAS OAY SING N N 15 
9YK CAT NAL SING N N 16 
9YK CAK NAL SING N N 17 
9YK CA  C   SING N N 18 
9YK CAR OAX SING N N 19 
9YK NAL CAM SING N N 20 
9YK C   O   DOUB N N 21 
9YK C   OXT SING N N 22 
9YK CAO CAP DOUB Y N 23 
9YK CAO CAN SING Y N 24 
9YK CAP CAW SING Y N 25 
9YK CBE SBB SING N N 26 
9YK CAM CAN SING N N 27 
9YK CAN CAU DOUB Y N 28 
9YK CAW CAV DOUB Y N 29 
9YK CAU CAV SING Y N 30 
9YK CAU SBB SING N N 31 
9YK OAX H1  SING N N 32 
9YK OAY H2  SING N N 33 
9YK CAQ H3  SING N N 34 
9YK CAE H4  SING N N 35 
9YK CAF H5  SING N N 36 
9YK CAH H6  SING N N 37 
9YK CAH H7  SING N N 38 
9YK CA  H9  SING N N 39 
9YK CA  H10 SING N N 40 
9YK OXT H11 SING N N 41 
9YK CAJ H12 SING N N 42 
9YK CAJ H13 SING N N 43 
9YK CAK H14 SING N N 44 
9YK CAK H15 SING N N 45 
9YK CAT H17 SING N N 46 
9YK CAT H18 SING N N 47 
9YK OBD H19 SING N N 48 
9YK CAM H20 SING N N 49 
9YK CAM H21 SING N N 50 
9YK CAO H22 SING N N 51 
9YK CAP H23 SING N N 52 
9YK CAW H24 SING N N 53 
9YK CAV H25 SING N N 54 
9YK CBE H26 SING N N 55 
9YK CBE H27 SING N N 56 
9YK CBE H28 SING N N 57 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9YK InChI            InChI                1.03  "InChI=1S/C21H26N2O6S/c1-30-18-8-3-2-5-15(18)11-22(13-19(25)26)9-10-23(14-20(27)28)12-16-6-4-7-17(24)21(16)29/h2-8,24,29H,9-14H2,1H3,(H,25,26)(H,27,28)" 
9YK InChIKey         InChI                1.03  CCWNBVUPGJNFLR-UHFFFAOYSA-N                                                                                                                              
9YK SMILES_CANONICAL CACTVS               3.385 "CSc1ccccc1CN(CCN(CC(O)=O)Cc2cccc(O)c2O)CC(O)=O"                                                                                                         
9YK SMILES           CACTVS               3.385 "CSc1ccccc1CN(CCN(CC(O)=O)Cc2cccc(O)c2O)CC(O)=O"                                                                                                         
9YK SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CSc1ccccc1CN(CCN(Cc2cccc(c2O)O)CC(=O)O)CC(=O)O"                                                                                                         
9YK SMILES           "OpenEye OEToolkits" 2.0.6 "CSc1ccccc1CN(CCN(Cc2cccc(c2O)O)CC(=O)O)CC(=O)O"                                                                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
9YK "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "2-[2-[[2,3-bis(oxidanyl)phenyl]methyl-(2-hydroxy-2-oxoethyl)amino]ethyl-[(2-methylsulfanylphenyl)methyl]amino]ethanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9YK "Create component" 2017-08-02 EBI  
9YK "Initial release"  2017-12-13 RCSB 
# 
