data_6NK
# 
_chem_comp.id                                    6NK 
_chem_comp.name                                  "2-{[2-(morpholin-4-yl)ethyl]amino}-1H-benzimidazole-6-carboxamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C14 H19 N5 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-05-11 
_chem_comp.pdbx_modified_date                    2017-05-19 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        289.333 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     6NK 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5JT5 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
6NK C1  C1  C 0 1 Y N N 10.113 17.389 91.917 -4.543 -0.410 0.004  C1  6NK 1  
6NK C2  C2  C 0 1 Y N N 8.864  16.995 91.422 -4.833 0.948  -0.187 C2  6NK 2  
6NK C3  C3  C 0 1 Y N N 8.594  17.009 90.066 -3.829 1.866  -0.253 C3  6NK 3  
6NK C4  C4  C 0 1 Y N N 9.601  17.425 89.211 -2.495 1.457  -0.130 C4  6NK 4  
6NK N5  N1  N 0 1 Y N N 11.654 18.189 88.600 -0.816 0.010  0.145  N5  6NK 5  
6NK C12 C5  C 0 1 Y N N 10.859 17.800 89.678 -2.197 0.095  0.062  C12 6NK 6  
6NK C13 C6  C 0 1 Y N N 11.132 17.779 91.046 -3.219 -0.832 0.134  C13 6NK 7  
6NK O   O1  O 0 1 N N N 11.514 17.777 93.787 -5.390 -2.572 0.238  O   6NK 8  
6NK C   C7  C 0 1 N N N 10.379 17.480 93.393 -5.640 -1.394 0.072  C   6NK 9  
6NK N1  N2  N 0 1 N N N 9.362  17.265 94.228 -6.919 -0.987 -0.048 N1  6NK 10 
6NK C5  C8  C 0 1 Y N N 10.881 18.057 87.533 -0.325 1.275  -0.002 C5  6NK 11 
6NK N2  N3  N 0 1 Y N N 9.645  17.602 87.838 -1.314 2.122  -0.160 N2  6NK 12 
6NK N3  N4  N 0 1 N N N 11.299 18.361 86.299 1.009  1.612  0.018  N3  6NK 13 
6NK C6  C9  C 0 1 N N N 10.452 18.277 85.117 2.025  0.573  0.203  C6  6NK 14 
6NK C7  C10 C 0 1 N N N 10.753 19.395 84.139 3.416  1.210  0.187  C7  6NK 15 
6NK H1  H1  H 0 1 N N N 8.097  16.674 92.112 -5.859 1.269  -0.283 H1  6NK 16 
6NK H2  H2  H 0 1 N N N 7.630  16.706 89.686 -4.061 2.910  -0.400 H2  6NK 17 
6NK H3  H3  H 0 1 N N N 12.604 18.501 88.627 -0.296 -0.797 0.278  H3  6NK 18 
6NK H4  H4  H 0 1 N N N 12.106 18.057 91.421 -2.995 -1.878 0.281  H4  6NK 19 
6NK H5  H5  H 0 1 N N N 9.501  17.342 95.215 -7.119 -0.047 -0.180 H5  6NK 20 
6NK H6  H6  H 0 1 N N N 8.460  17.027 93.867 -7.640 -1.634 -0.003 H6  6NK 21 
6NK H8  H8  H 0 1 N N N 12.078 17.761 86.119 1.277  2.538  -0.090 H8  6NK 22 
6NK H9  H9  H 0 1 N N N 9.399  18.346 85.426 1.865  0.075  1.159  H9  6NK 23 
6NK H10 H10 H 0 1 N N N 10.626 17.311 84.620 1.950  -0.156 -0.604 H10 6NK 24 
6NK H11 H11 H 0 1 N N N 10.091 20.240 84.378 3.576  1.709  -0.770 H11 6NK 25 
6NK H12 H12 H 0 1 N N N 11.800 19.698 84.284 3.491  1.939  0.993  H12 6NK 26 
6NK N4  N5  N 0 1 N N N ?      ?      ?      4.434  0.168  0.372  N4  6NK 27 
6NK C9  C11 C 0 1 N N N ?      ?      ?      5.783  0.699  0.127  C9  6NK 28 
6NK C10 C12 C 0 1 N N N ?      ?      ?      6.815  -0.401 0.388  C10 6NK 29 
6NK O1  O2  O 0 1 N N N ?      ?      ?      6.519  -1.531 -0.438 O1  6NK 30 
6NK C14 C14 C 0 1 N N N ?      ?      ?      5.214  -2.074 -0.224 C14 6NK 31 
6NK C15 C15 C 0 1 N N N ?      ?      ?      4.166  -0.991 -0.492 C15 6NK 32 
6NK H7  H7  H 0 1 N N N ?      ?      ?      5.860  1.032  -0.908 H7  6NK 33 
6NK H13 H13 H 0 1 N N N ?      ?      ?      5.970  1.540  0.795  H13 6NK 34 
6NK H14 H14 H 0 1 N N N ?      ?      ?      7.812  -0.029 0.153  H14 6NK 35 
6NK H15 H15 H 0 1 N N N ?      ?      ?      6.774  -0.696 1.437  H15 6NK 36 
6NK H16 H16 H 0 1 N N N ?      ?      ?      5.053  -2.912 -0.903 H16 6NK 37 
6NK H17 H17 H 0 1 N N N ?      ?      ?      5.127  -2.418 0.806  H17 6NK 38 
6NK H18 H18 H 0 1 N N N ?      ?      ?      3.172  -1.384 -0.276 H18 6NK 39 
6NK H19 H19 H 0 1 N N N ?      ?      ?      4.217  -0.685 -1.537 H19 6NK 40 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
6NK C7  C6  SING N N 1  
6NK C6  N3  SING N N 2  
6NK N3  C5  SING N N 3  
6NK C5  N2  DOUB Y N 4  
6NK C5  N5  SING Y N 5  
6NK N2  C4  SING Y N 6  
6NK N5  C12 SING Y N 7  
6NK C4  C12 DOUB Y N 8  
6NK C4  C3  SING Y N 9  
6NK C12 C13 SING Y N 10 
6NK C3  C2  DOUB Y N 11 
6NK C13 C1  DOUB Y N 12 
6NK C2  C1  SING Y N 13 
6NK C1  C   SING N N 14 
6NK C   O   DOUB N N 15 
6NK C   N1  SING N N 16 
6NK C2  H1  SING N N 17 
6NK C3  H2  SING N N 18 
6NK N5  H3  SING N N 19 
6NK C13 H4  SING N N 20 
6NK N1  H5  SING N N 21 
6NK N1  H6  SING N N 22 
6NK N3  H8  SING N N 23 
6NK C6  H9  SING N N 24 
6NK C6  H10 SING N N 25 
6NK C7  H11 SING N N 26 
6NK C7  H12 SING N N 27 
6NK C7  N4  SING N N 28 
6NK N4  C9  SING N N 29 
6NK C9  C10 SING N N 30 
6NK C10 O1  SING N N 31 
6NK O1  C14 SING N N 32 
6NK C14 C15 SING N N 33 
6NK C15 N4  SING N N 34 
6NK C9  H7  SING N N 35 
6NK C9  H13 SING N N 36 
6NK C10 H14 SING N N 37 
6NK C10 H15 SING N N 38 
6NK C14 H16 SING N N 39 
6NK C14 H17 SING N N 40 
6NK C15 H18 SING N N 41 
6NK C15 H19 SING N N 42 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
6NK SMILES           ACDLabs              12.01 "c3(C(=O)N)ccc1c(nc(n1)NCCN2CCOCC2)c3"                                                                                      
6NK InChI            InChI                1.03  "InChI=1S/C14H19N5O2/c15-13(20)10-1-2-11-12(9-10)18-14(17-11)16-3-4-19-5-7-21-8-6-19/h1-2,9H,3-8H2,(H2,15,20)(H2,16,17,18)" 
6NK InChIKey         InChI                1.03  YAZZCCWYYDHQPD-UHFFFAOYSA-N                                                                                                 
6NK SMILES_CANONICAL CACTVS               3.385 "NC(=O)c1ccc2nc(NCCN3CCOCC3)[nH]c2c1"                                                                                       
6NK SMILES           CACTVS               3.385 "NC(=O)c1ccc2nc(NCCN3CCOCC3)[nH]c2c1"                                                                                       
6NK SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "c1cc2c(cc1C(=O)N)[nH]c(n2)NCCN3CCOCC3"                                                                                     
6NK SMILES           "OpenEye OEToolkits" 2.0.4 "c1cc2c(cc1C(=O)N)[nH]c(n2)NCCN3CCOCC3"                                                                                     
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
6NK "SYSTEMATIC NAME" ACDLabs              12.01 "2-{[2-(morpholin-4-yl)ethyl]amino}-1H-benzimidazole-6-carboxamide" 
6NK "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 "2-(2-morpholin-4-ylethylamino)-3~{H}-benzimidazole-5-carboxamide"  
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
6NK "Create component" 2016-05-11 EBI  
6NK "Initial release"  2017-05-24 RCSB 
# 
