data_6EK
# 
_chem_comp.id                                    6EK 
_chem_comp.name                                  
"(2S,3S)-2-{[(2S)-3-(2-amino-1H-imidazol-5-yl)-2-{[(2S,4S)-5-(carbamoyloxy)-4-hydroxy-2-({[(2S,3S)-3-hydroxypiperidin-2-yl]carbonyl}amino)pentanoyl]amino}propanoyl]amino}-3-(2-chloro-1H-imidazol-5-yl)-3-hydroxypropanoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H35 Cl N10 O10" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2016-03-23 
_chem_comp.pdbx_modified_date                    2016-04-22 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        659.049 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     6EK 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5IWA 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
6EK C10 C1  C  0 1 N N N 311.047 187.319 17.962 -2.817 -0.050 -1.094 C10 6EK 1  
6EK C15 C2  C  0 1 Y N N 309.380 181.776 18.162 -5.646 0.668  1.658  C15 6EK 2  
6EK C17 C3  C  0 1 N N N 312.110 183.765 18.037 -5.442 -0.333 -2.854 C17 6EK 3  
6EK C20 C4  C  0 1 N N N 304.180 186.832 18.861 3.092  -3.800 -0.339 C20 6EK 4  
6EK C21 C5  C  0 1 N N N 304.535 184.694 19.994 4.465  -5.752 -0.371 C21 6EK 5  
6EK C22 C6  C  0 1 N N N 311.623 189.714 17.395 -1.779 2.178  -1.421 C22 6EK 6  
6EK C24 C7  C  0 1 Y N N 315.136 189.106 18.510 1.124  4.273  -0.627 C24 6EK 7  
6EK C01 C8  C  0 1 N N N 307.750 195.161 16.417 6.478  3.021  1.839  C01 6EK 8  
6EK C02 C9  C  0 1 N N N 306.362 195.508 16.735 7.827  2.389  1.486  C02 6EK 9  
6EK C03 C10 C  0 1 N N N 305.367 194.767 15.879 7.715  0.866  1.592  C03 6EK 10 
6EK N01 N1  N  0 1 N N N 305.509 193.328 16.031 6.674  0.386  0.674  N01 6EK 11 
6EK C04 C11 C  0 1 N N S 306.883 192.819 15.890 5.361  0.942  1.023  C04 6EK 12 
6EK C05 C12 C  0 1 N N S 307.964 193.880 15.730 5.403  2.467  0.900  C05 6EK 13 
6EK O01 O1  O  0 1 N N N 308.138 194.231 14.403 4.130  3.010  1.259  O01 6EK 14 
6EK C06 C13 C  0 1 N N N 307.222 191.818 17.027 4.317  0.392  0.085  C06 6EK 15 
6EK N02 N2  N  0 1 N N N 306.812 190.421 16.973 3.015  0.423  0.433  N02 6EK 16 
6EK C07 C14 C  0 1 N N S 307.116 189.451 18.043 2.001  -0.112 -0.478 C07 6EK 17 
6EK C08 C15 C  0 1 N N N 308.650 189.192 18.151 0.676  0.551  -0.200 C08 6EK 18 
6EK N03 N3  N  0 1 N N N 309.417 188.696 17.008 -0.411 0.213  -0.922 N03 6EK 19 
6EK C09 C16 C  0 1 N N S 310.841 188.430 17.031 -1.698 0.858  -0.652 C09 6EK 20 
6EK N04 N4  N  0 1 N N N 310.836 185.910 17.565 -4.099 0.339  -0.948 N04 6EK 21 
6EK C11 C17 C  0 1 N N S 311.098 184.814 18.596 -5.186 -0.541 -1.383 C11 6EK 22 
6EK C12 C18 C  0 1 N N S 309.904 184.111 19.212 -6.455 -0.213 -0.594 C12 6EK 23 
6EK O09 O2  O  0 1 N N N 310.213 183.417 20.382 -6.888 1.110  -0.915 O09 6EK 24 
6EK N05 N5  N  0 1 Y N N 308.379 183.483 17.197 -6.377 -1.387 1.693  N05 6EK 25 
6EK C14 C19 C  0 1 Y N N 308.028 182.354 16.567 -5.989 -1.036 2.939  C14 6EK 26 
6EK N06 N6  N  0 1 Y N N 308.635 181.300 17.151 -5.549 0.193  2.909  N06 6EK 27 
6EK C16 C20 C  0 1 Y N N 309.228 183.155 18.198 -6.165 -0.302 0.883  C16 6EK 28 
6EK CL  CL1 CL 0 0 N N N 306.954 182.255 15.203 -6.057 -2.054 4.344  CL  6EK 29 
6EK O02 O3  O  0 1 N N N 312.833 184.059 17.025 -4.784 0.468  -3.474 O02 6EK 30 
6EK O03 O4  O  0 1 N N N 312.215 182.653 18.570 -6.402 -1.037 -3.474 O03 6EK 31 
6EK O04 O5  O  0 1 N N N 309.220 189.408 19.252 0.588  1.388  0.673  O04 6EK 32 
6EK O05 O6  O  0 1 N N N 311.406 187.562 19.105 -2.564 -1.129 -1.587 O05 6EK 33 
6EK O06 O7  O  0 1 N N N 307.849 192.222 17.972 4.649  -0.079 -0.982 O06 6EK 34 
6EK C18 C21 C  0 1 N N N 306.281 188.122 17.977 1.870  -1.622 -0.266 C18 6EK 35 
6EK C19 C22 C  0 1 N N S 304.859 188.200 18.577 3.177  -2.308 -0.667 C19 6EK 36 
6EK O07 O8  O  0 1 N N N 305.045 185.848 19.385 4.372  -4.430 -0.609 O07 6EK 37 
6EK N07 N7  N  0 1 N N N 304.070 184.747 21.370 5.626  -6.397 -0.601 N07 6EK 38 
6EK O08 O9  O  0 1 N N N 304.749 183.614 19.500 3.504  -6.362 0.051  O08 6EK 39 
6EK O   O10 O  0 1 N N N 304.880 188.983 19.706 3.392  -2.141 -2.070 O   6EK 40 
6EK C23 C23 C  0 1 Y N N 313.166 189.554 17.603 -0.738 3.131  -0.893 C23 6EK 41 
6EK N08 N8  N  0 1 Y N N 313.798 189.061 18.707 0.524  3.332  -1.405 N08 6EK 42 
6EK C   C24 C  0 1 Y N N 314.175 189.932 16.718 -0.861 3.940  0.173  C   6EK 43 
6EK N09 N9  N  0 1 Y N N 315.369 189.639 17.287 0.284  4.629  0.315  N09 6EK 44 
6EK N   N10 N  0 1 N N N 316.152 188.657 19.457 2.407  4.767  -0.798 N   6EK 45 
6EK H1  H1  H  0 1 N N N 309.991 181.188 18.831 -5.362 1.658  1.331  H1  6EK 46 
6EK H2  H2  H  0 1 N N N 303.367 186.995 19.584 2.840  -3.927 0.714  H2  6EK 47 
6EK H3  H3  H  0 1 N N N 303.761 186.454 17.917 2.321  -4.264 -0.955 H3  6EK 48 
6EK H4  H4  H  0 1 N N N 311.468 190.441 16.584 -1.599 1.994  -2.480 H4  6EK 49 
6EK H5  H5  H  0 1 N N N 311.199 190.111 18.329 -2.770 2.614  -1.291 H5  6EK 50 
6EK H6  H6  H  0 1 N N N 308.312 195.132 17.362 6.221  2.778  2.871  H6  6EK 51 
6EK H7  H7  H  0 1 N N N 308.155 195.957 15.774 6.542  4.103  1.725  H7  6EK 52 
6EK H8  H8  H  0 1 N N N 306.225 196.588 16.579 8.102  2.664  0.468  H8  6EK 53 
6EK H9  H9  H  0 1 N N N 306.171 195.262 17.790 8.589  2.747  2.178  H9  6EK 54 
6EK H10 H10 H  0 1 N N N 305.532 195.034 14.825 8.670  0.412  1.327  H10 6EK 55 
6EK H11 H11 H  0 1 N N N 304.349 195.060 16.177 7.453  0.591  2.613  H11 6EK 56 
6EK H12 H12 H  0 1 N N N 305.178 193.078 16.941 6.912  0.595  -0.284 H12 6EK 57 
6EK H14 H14 H  0 1 N N N 306.902 192.229 14.962 5.110  0.667  2.047  H14 6EK 58 
6EK H15 H15 H  0 1 N N N 308.901 193.447 16.110 5.640  2.743  -0.127 H15 6EK 59 
6EK H16 H16 H  0 1 N N N 308.817 194.892 14.336 4.084  3.974  1.205  H16 6EK 60 
6EK H17 H17 H  0 1 N N N 306.301 190.105 16.174 2.750  0.800  1.287  H17 6EK 61 
6EK H18 H18 H  0 1 N N N 306.830 189.931 18.990 2.297  0.086  -1.508 H18 6EK 62 
6EK H19 H19 H  0 1 N N N 308.925 188.529 16.153 -0.340 -0.456 -1.621 H19 6EK 63 
6EK H20 H20 H  0 1 N N N 311.162 188.115 16.027 -1.790 1.053  0.416  H20 6EK 64 
6EK H21 H21 H  0 1 N N N 310.529 185.680 16.642 -4.302 1.202  -0.554 H21 6EK 65 
6EK H22 H22 H  0 1 N N N 311.619 185.307 19.430 -4.906 -1.579 -1.207 H22 6EK 66 
6EK H23 H23 H  0 1 N N N 309.163 184.888 19.453 -7.239 -0.925 -0.853 H23 6EK 67 
6EK H24 H24 H  0 1 N N N 310.627 184.007 21.001 -6.239 1.797  -0.710 H24 6EK 68 
6EK H25 H25 H  0 1 N N N 308.068 184.405 16.968 -6.744 -2.243 1.424  H25 6EK 69 
6EK H27 H27 H  0 1 N N N 312.871 182.142 18.110 -6.529 -0.869 -4.418 H27 6EK 70 
6EK H28 H28 H  0 1 N N N 306.188 187.832 16.920 1.661  -1.824 0.785  H28 6EK 71 
6EK H29 H29 H  0 1 N N N 306.837 187.345 18.522 1.055  -2.006 -0.879 H29 6EK 72 
6EK H30 H30 H  0 1 N N N 304.234 188.700 17.822 4.006  -1.862 -0.117 H30 6EK 73 
6EK H31 H31 H  0 1 N N N 303.934 183.901 21.885 6.394  -5.910 -0.938 H31 6EK 74 
6EK H32 H32 H  0 1 N N N 303.886 185.630 21.802 5.693  -7.349 -0.429 H32 6EK 75 
6EK H33 H33 H  0 1 N N N 304.006 189.031 20.075 2.692  -2.515 -2.622 H33 6EK 76 
6EK H34 H34 H  0 1 N N N 313.345 188.721 19.531 0.912  2.887  -2.175 H34 6EK 77 
6EK H35 H35 H  0 1 N N N 314.030 190.381 15.747 -1.733 4.025  0.805  H35 6EK 78 
6EK H37 H37 H  0 1 N N N 317.061 188.802 19.066 2.960  4.439  -1.524 H37 6EK 79 
6EK H38 H38 H  0 1 N N N 316.068 189.177 20.307 2.752  5.440  -0.191 H38 6EK 80 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
6EK O01 C05 SING N N 1  
6EK CL  C14 SING N N 2  
6EK C05 C04 SING N N 3  
6EK C05 C01 SING N N 4  
6EK C03 N01 SING N N 5  
6EK C03 C02 SING N N 6  
6EK C04 N01 SING N N 7  
6EK C04 C06 SING N N 8  
6EK C01 C02 SING N N 9  
6EK C14 N06 DOUB Y N 10 
6EK C14 N05 SING Y N 11 
6EK C   N09 SING Y N 12 
6EK C   C23 DOUB Y N 13 
6EK N02 C06 SING N N 14 
6EK N02 C07 SING N N 15 
6EK N03 C09 SING N N 16 
6EK N03 C08 SING N N 17 
6EK O02 C17 DOUB N N 18 
6EK C06 O06 DOUB N N 19 
6EK C09 C22 SING N N 20 
6EK C09 C10 SING N N 21 
6EK N06 C15 SING Y N 22 
6EK N05 C16 SING Y N 23 
6EK N09 C24 DOUB Y N 24 
6EK C22 C23 SING N N 25 
6EK N04 C10 SING N N 26 
6EK N04 C11 SING N N 27 
6EK C23 N08 SING Y N 28 
6EK C10 O05 DOUB N N 29 
6EK C18 C07 SING N N 30 
6EK C18 C19 SING N N 31 
6EK C17 O03 SING N N 32 
6EK C17 C11 SING N N 33 
6EK C07 C08 SING N N 34 
6EK C08 O04 DOUB N N 35 
6EK C15 C16 DOUB Y N 36 
6EK C16 C12 SING N N 37 
6EK C24 N08 SING Y N 38 
6EK C24 N   SING N N 39 
6EK C19 C20 SING N N 40 
6EK C19 O   SING N N 41 
6EK C11 C12 SING N N 42 
6EK C20 O07 SING N N 43 
6EK C12 O09 SING N N 44 
6EK O07 C21 SING N N 45 
6EK O08 C21 DOUB N N 46 
6EK C21 N07 SING N N 47 
6EK C15 H1  SING N N 48 
6EK C20 H2  SING N N 49 
6EK C20 H3  SING N N 50 
6EK C22 H4  SING N N 51 
6EK C22 H5  SING N N 52 
6EK C01 H6  SING N N 53 
6EK C01 H7  SING N N 54 
6EK C02 H8  SING N N 55 
6EK C02 H9  SING N N 56 
6EK C03 H10 SING N N 57 
6EK C03 H11 SING N N 58 
6EK N01 H12 SING N N 59 
6EK C04 H14 SING N N 60 
6EK C05 H15 SING N N 61 
6EK O01 H16 SING N N 62 
6EK N02 H17 SING N N 63 
6EK C07 H18 SING N N 64 
6EK N03 H19 SING N N 65 
6EK C09 H20 SING N N 66 
6EK N04 H21 SING N N 67 
6EK C11 H22 SING N N 68 
6EK C12 H23 SING N N 69 
6EK O09 H24 SING N N 70 
6EK N05 H25 SING N N 71 
6EK O03 H27 SING N N 72 
6EK C18 H28 SING N N 73 
6EK C18 H29 SING N N 74 
6EK C19 H30 SING N N 75 
6EK N07 H31 SING N N 76 
6EK N07 H32 SING N N 77 
6EK O   H33 SING N N 78 
6EK N08 H34 SING N N 79 
6EK C   H35 SING N N 80 
6EK N   H37 SING N N 81 
6EK N   H38 SING N N 82 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
6EK SMILES           ACDLabs              12.01 "C(=O)(C(Cc1nc(N)nc1)NC(C(NC(C2NCCCC2O)=O)CC(COC(N)=O)O)=O)NC(C(O)=O)C(O)c3cnc(n3)Cl" 
6EK InChI            InChI                1.03  
;InChI=1S/C24H35ClN10O10/c25-22-29-7-13(34-22)17(38)16(21(42)43)35-19(40)11(4-9-6-30-23(26)31-9)32-18(39)12(5-10(36)8-45-24(27)44)33-20(41)15-14(37)2-1-3-28-15/h6-7,10-12,14-17,28,36-38H,1-5,8H2,(H2,27,44)(H,29,34)(H,32,39)(H,33,41)(H,35,40)(H,42,43)(H3,26,30,31)/t10-,11-,12-,14-,15-,16-,17+/m0/s1
;
6EK InChIKey         InChI                1.03  UFNFLYFKIYFJJJ-PLHJXKGHSA-N 
6EK SMILES_CANONICAL CACTVS               3.385 "NC(=O)OC[C@@H](O)C[C@H](NC(=O)[C@H]1NCCC[C@@H]1O)C(=O)N[C@@H](Cc2[nH]c(N)nc2)C(=O)N[C@@H]([C@H](O)c3[nH]c(Cl)nc3)C(O)=O" 
6EK SMILES           CACTVS               3.385 "NC(=O)OC[CH](O)C[CH](NC(=O)[CH]1NCCC[CH]1O)C(=O)N[CH](Cc2[nH]c(N)nc2)C(=O)N[CH]([CH](O)c3[nH]c(Cl)nc3)C(O)=O" 
6EK SMILES_CANONICAL "OpenEye OEToolkits" 2.0.4 "c1c([nH]c(n1)N)C[C@@H](C(=O)N[C@@H]([C@@H](c2cnc([nH]2)Cl)O)C(=O)O)NC(=O)[C@H](C[C@@H](COC(=O)N)O)NC(=O)[C@@H]3[C@H](CCCN3)O" 
6EK SMILES           "OpenEye OEToolkits" 2.0.4 "c1c([nH]c(n1)N)CC(C(=O)NC(C(c2cnc([nH]2)Cl)O)C(=O)O)NC(=O)C(CC(COC(=O)N)O)NC(=O)C3C(CCCN3)O" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
6EK "SYSTEMATIC NAME" ACDLabs              12.01 
"(2S,3S)-2-{[(2S)-3-(2-amino-1H-imidazol-5-yl)-2-{[(2S,4S)-5-(carbamoyloxy)-4-hydroxy-2-({[(2S,3S)-3-hydroxypiperidin-2-yl]carbonyl}amino)pentanoyl]amino}propanoyl]amino}-3-(2-chloro-1H-imidazol-5-yl)-3-hydroxypropanoic acid (non-preferred name)" 
6EK "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.4 
;(2~{S},3~{S})-2-[[(2~{S})-2-[[(2~{S},4~{S})-5-aminocarbonyloxy-4-oxidanyl-2-[[(2~{S},3~{S})-3-oxidanylpiperidin-2-yl]carbonylamino]pentanoyl]amino]-3-(2-azanyl-1~{H}-imidazol-5-yl)propanoyl]amino]-3-(2-chloranyl-1~{H}-imidazol-5-yl)-3-oxidanyl-propanoic acid
;
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
6EK "Create component" 2016-03-23 EBI  
6EK "Initial release"  2016-04-27 RCSB 
# 
