data_5KK
# 
_chem_comp.id                                    5KK 
_chem_comp.name                                  "1,3,6,8,10,13,16,19-octaazabicyclo[6.6.6]icosane" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C12 H30 N8" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-10-12 
_chem_comp.pdbx_modified_date                    2016-09-23 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        286.420 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     5KK 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5E78 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
5KK C1  C1  C 0 1 N N N -16.636 45.840 -6.043 2.451  0.292  1.453  C1  5KK 1  
5KK N1  N1  N 0 1 N N N -15.367 46.572 -6.113 1.054  -0.221 1.382  N1  5KK 2  
5KK C4  C2  C 0 1 N N N -14.302 46.042 -5.245 0.670  -0.636 2.766  C4  5KK 3  
5KK C7  C3  C 0 1 N N N -13.106 47.010 -5.215 -0.838 -0.435 2.898  C7  5KK 4  
5KK N4  N2  N 0 1 N N N -13.485 48.343 -4.704 -1.490 -0.833 1.625  N4  5KK 5  
5KK C11 C4  C 0 1 N N N -12.573 49.385 -5.203 -2.501 0.186  1.289  C11 5KK 6  
5KK N8  N3  N 0 1 N N N -13.243 50.637 -5.669 -2.871 0.093  -0.144 N8  5KK 7  
5KK C10 C5  C 0 1 N N N -13.597 50.695 -7.123 -2.128 1.107  -0.926 C10 5KK 8  
5KK N6  N4  N 0 1 N N N -14.222 49.471 -7.664 -1.439 2.072  -0.025 N6  5KK 9  
5KK C8  C6  C 0 1 N N N -15.309 49.796 -8.605 -0.612 2.958  -0.902 C8  5KK 10 
5KK C6  C7  C 0 1 N N N -16.717 49.514 -8.058 0.579  2.171  -1.435 C6  5KK 11 
5KK N3  N5  N 0 1 N N N -17.021 48.085 -7.888 1.302  1.547  -0.283 N3  5KK 12 
5KK C3  C8  C 0 1 N N N -18.007 47.878 -6.810 2.592  1.026  -0.809 C3  5KK 13 
5KK N7  N6  N 0 1 N N N -17.807 46.727 -5.869 3.113  -0.023 0.134  N7  5KK 14 
5KK C2  C9  C 0 1 N N N -18.003 47.172 -4.468 2.443  -1.299 -0.303 C2  5KK 15 
5KK N2  N7  N 0 1 N N N -16.987 48.143 -4.029 1.275  -0.948 -1.155 N2  5KK 16 
5KK C5  C10 C 0 1 N N N -17.475 49.519 -3.861 0.855  -2.210 -1.835 C5  5KK 17 
5KK C9  C11 C 0 1 N N N -16.259 50.426 -3.602 -0.616 -2.468 -1.520 C9  5KK 18 
5KK N5  N8  N 0 1 N N N -15.583 50.666 -4.899 -1.346 -1.166 -1.568 N5  5KK 19 
5KK C12 C12 C 0 1 N N N -14.241 51.230 -4.731 -2.500 -1.262 -0.635 C12 5KK 20 
5KK H1  H1  H 0 1 N N N -16.764 45.270 -6.975 2.439  1.356  1.630  H1  5KK 21 
5KK H2  H2  H 0 1 N N N -16.593 45.145 -5.191 2.966  -0.238 2.250  H2  5KK 22 
5KK H3  H3  H 0 1 N N N -15.042 46.542 -7.058 0.488  0.678  1.292  H3  5KK 23 
5KK H5  H5  H 0 1 N N N -14.694 45.918 -4.225 0.924  -1.679 2.895  H5  5KK 24 
5KK H6  H6  H 0 1 N N N -13.970 45.067 -5.632 1.199  -0.002 3.469  H6  5KK 25 
5KK H7  H7  H 0 1 N N N -12.325 46.589 -4.565 -1.233 -1.048 3.699  H7  5KK 26 
5KK H8  H8  H 0 1 N N N -12.713 47.120 -6.236 -1.061 0.615  3.080  H8  5KK 27 
5KK H9  H9  H 0 1 N N N -14.416 48.554 -5.003 -0.759 -0.765 0.887  H9  5KK 28 
5KK H11 H11 H 0 1 N N N -12.005 48.967 -6.047 -3.401 -0.020 1.878  H11 5KK 29 
5KK H12 H12 H 0 1 N N N -11.880 49.650 -4.391 -2.134 1.171  1.527  H12 5KK 30 
5KK H14 H14 H 0 1 N N N -12.675 50.887 -7.691 -1.391 0.670  -1.576 H14 5KK 31 
5KK H15 H15 H 0 1 N N N -14.298 51.530 -7.270 -2.846 1.673  -1.526 H15 5KK 32 
5KK H16 H16 H 0 1 N N N -14.596 48.934 -6.907 -0.689 1.456  0.413  H16 5KK 33 
5KK H18 H18 H 0 1 N N N -15.167 49.198 -9.517 -1.237 3.298  -1.723 H18 5KK 34 
5KK H19 H19 H 0 1 N N N -15.243 50.866 -8.853 -0.284 3.807  -0.311 H19 5KK 35 
5KK H20 H20 H 0 1 N N N -16.812 50.006 -7.079 0.245  1.375  -2.097 H20 5KK 36 
5KK H21 H21 H 0 1 N N N -17.451 49.942 -8.756 1.267  2.833  -1.953 H21 5KK 37 
5KK H22 H22 H 0 1 N N N -17.392 47.726 -8.744 1.618  2.412  0.260  H22 5KK 38 
5KK H24 H24 H 0 1 N N N -18.022 48.795 -6.203 2.444  0.615  -1.797 H24 5KK 39 
5KK H25 H25 H 0 1 N N N -18.988 47.739 -7.289 3.304  1.854  -0.841 H25 5KK 40 
5KK H27 H27 H 0 1 N N N -18.995 47.639 -4.384 3.146  -1.887 -0.890 H27 5KK 41 
5KK H28 H28 H 0 1 N N N -17.955 46.292 -3.810 2.106  -1.857 0.561  H28 5KK 42 
5KK H29 H29 H 0 1 N N N -16.622 47.834 -3.151 0.494  -0.839 -0.438 H29 5KK 43 
5KK H31 H31 H 0 1 N N N -17.996 49.844 -4.774 1.005  -2.090 -2.901 H31 5KK 44 
5KK H32 H32 H 0 1 N N N -18.166 49.568 -3.007 1.468  -3.021 -1.454 H32 5KK 45 
5KK H33 H33 H 0 1 N N N -15.566 49.931 -2.906 -1.046 -3.130 -2.267 H33 5KK 46 
5KK H34 H34 H 0 1 N N N -16.591 51.382 -3.172 -0.715 -2.893 -0.526 H34 5KK 47 
5KK H35 H35 H 0 1 N N N -16.135 51.304 -5.436 -1.827 -1.226 -2.524 H35 5KK 48 
5KK H37 H37 H 0 1 N N N -13.908 51.043 -3.699 -2.260 -1.914 0.189  H37 5KK 49 
5KK H38 H38 H 0 1 N N N -14.290 52.314 -4.910 -3.348 -1.663 -1.195 H38 5KK 50 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
5KK C8  C6  SING N N 1  
5KK C8  N6  SING N N 2  
5KK C6  N3  SING N N 3  
5KK N3  C3  SING N N 4  
5KK N6  C10 SING N N 5  
5KK C10 N8  SING N N 6  
5KK C3  N7  SING N N 7  
5KK N1  C1  SING N N 8  
5KK N1  C4  SING N N 9  
5KK C1  N7  SING N N 10 
5KK N7  C2  SING N N 11 
5KK N8  C11 SING N N 12 
5KK N8  C12 SING N N 13 
5KK C4  C7  SING N N 14 
5KK C7  N4  SING N N 15 
5KK C11 N4  SING N N 16 
5KK N5  C12 SING N N 17 
5KK N5  C9  SING N N 18 
5KK C2  N2  SING N N 19 
5KK N2  C5  SING N N 20 
5KK C5  C9  SING N N 21 
5KK C1  H1  SING N N 22 
5KK C1  H2  SING N N 23 
5KK N1  H3  SING N N 24 
5KK C4  H5  SING N N 25 
5KK C4  H6  SING N N 26 
5KK C7  H7  SING N N 27 
5KK C7  H8  SING N N 28 
5KK N4  H9  SING N N 29 
5KK C11 H11 SING N N 30 
5KK C11 H12 SING N N 31 
5KK C10 H14 SING N N 32 
5KK C10 H15 SING N N 33 
5KK N6  H16 SING N N 34 
5KK C8  H18 SING N N 35 
5KK C8  H19 SING N N 36 
5KK C6  H20 SING N N 37 
5KK C6  H21 SING N N 38 
5KK N3  H22 SING N N 39 
5KK C3  H24 SING N N 40 
5KK C3  H25 SING N N 41 
5KK C2  H27 SING N N 42 
5KK C2  H28 SING N N 43 
5KK N2  H29 SING N N 44 
5KK C5  H31 SING N N 45 
5KK C5  H32 SING N N 46 
5KK C9  H33 SING N N 47 
5KK C9  H34 SING N N 48 
5KK N5  H35 SING N N 49 
5KK C12 H37 SING N N 50 
5KK C12 H38 SING N N 51 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
5KK SMILES           ACDLabs              12.01 "C1N2CNCCNCN(CNCCN1)CNCCNC2"                                                                
5KK InChI            InChI                1.03  "InChI=1S/C12H30N8/c1-2-14-8-20-11-17-5-3-15-9-19(7-13-1)10-16-4-6-18-12-20/h13-18H,1-12H2" 
5KK InChIKey         InChI                1.03  UUGRFRITTVBJHJ-UHFFFAOYSA-N                                                                 
5KK SMILES_CANONICAL CACTVS               3.385 "C1CNCN2CNCCNCN(CN1)CNCCNC2"                                                                
5KK SMILES           CACTVS               3.385 "C1CNCN2CNCCNCN(CN1)CNCCNC2"                                                                
5KK SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "C1CNCN2CNCCNCN(CN1)CNCCNC2"                                                                
5KK SMILES           "OpenEye OEToolkits" 1.9.2 "C1CNCN2CNCCNCN(CN1)CNCCNC2"                                                                
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
5KK "SYSTEMATIC NAME" ACDLabs              12.01 "1,3,6,8,10,13,16,19-octaazabicyclo[6.6.6]icosane" 
5KK "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "1,3,6,8,10,13,16,19-octazabicyclo[6.6.6]icosane"  
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
5KK "Create component" 2015-10-12 EBI  
5KK "Initial release"  2016-09-28 RCSB 
# 
