data_5GK
#

_chem_comp.id                                   5GK
_chem_comp.name                                 "5-[(4-{cis-4-[3-(trifluoromethyl)phenyl]cyclohexyl}piperazin-1-yl)methyl]pyridin-2(1H)-one"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C23 H28 F3 N3 O"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-09-16
_chem_comp.pdbx_modified_date                   2020-12-04
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       419.483
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    5GK
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7K4F
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
5GK  C01  C1   C  0  1  N  N  N  86.909  118.980  83.615  -7.658  -1.432  -0.630  C01  5GK   1  
5GK  N01  N1   N  0  1  N  N  N  86.803  117.652  84.014  -7.662  -0.998   0.645  N01  5GK   2  
5GK  O01  O1   O  0  1  N  N  N  86.977  119.275  82.256  -8.582  -2.113  -1.045  O01  5GK   3  
5GK  C02  C2   C  0  1  N  N  N  86.955  120.068  84.605  -6.594  -1.095  -1.485  C02  5GK   4  
5GK  N02  N2   N  0  1  N  N  N  87.071  116.869  88.209  -3.393   0.087   1.328  N02  5GK   5  
5GK  C03  C3   C  0  1  N  N  N  86.887  119.751  85.971  -5.572  -0.328  -1.008  C03  5GK   6  
5GK  N03  N3   N  0  1  N  N  N  86.972  115.968  90.947  -1.106   1.160   0.016  N03  5GK   7  
5GK  C04  C4   C  0  1  N  N  N  86.737  117.334  85.423  -6.645  -0.234   1.121  C04  5GK   8  
5GK  C05  C5   C  0  1  N  N  N  86.780  118.384  86.387  -5.606   0.108   0.324  C05  5GK   9  
5GK  C06  C6   C  0  1  N  N  N  86.704  118.077  87.908  -4.485   0.956   0.869  C06  5GK  10  
5GK  C07  C7   C  0  1  N  N  N  86.006  116.283  88.709  -2.389   0.855   2.078  C07  5GK  11  
5GK  C08  C8   C  0  1  N  N  N  86.126  115.388  89.933  -1.725   1.870   1.144  C08  5GK  12  
5GK  C09  C9   C  0  1  N  N  N  88.266  116.185  90.348  -2.109   0.392  -0.734  C09  5GK  13  
5GK  C10  C10  C  0  1  N  N  N  88.183  117.004  88.996  -2.774  -0.622   0.200  C10  5GK  14  
5GK  C11  C11  C  0  1  N  N  N  86.413  117.245  91.444  -0.391   2.094  -0.865  C11  5GK  15  
5GK  C12  C12  C  0  1  N  N  N  85.065  117.078  92.094   0.675   2.840  -0.060  C12  5GK  16  
5GK  C13  C13  C  0  1  N  N  N  85.094  116.178  93.350   1.666   1.834   0.529  C13  5GK  17  
5GK  C14  C14  C  0  1  N  N  N  86.220  116.454  94.332   2.336   1.055  -0.605  C14  5GK  18  
5GK  C15  C15  C  0  1  Y  N  N  86.653  115.066  94.689   3.312   0.064  -0.025  C15  5GK  19  
5GK  C16  C16  C  0  1  Y  N  N  87.182  114.283  93.773   2.868  -0.922   0.835  C16  5GK  20  
5GK  C17  C17  C  0  1  Y  N  N  87.599  112.879  94.170   3.763  -1.831   1.367  C17  5GK  21  
5GK  C18  C18  C  0  1  Y  N  N  87.414  112.485  95.419   5.104  -1.753   1.038  C18  5GK  22  
5GK  C19  C19  C  0  1  Y  N  N  86.782  113.427  96.439   5.549  -0.767   0.178  C19  5GK  23  
5GK  C20  C20  C  0  1  N  N  N  86.554  112.997  97.895   7.010  -0.682  -0.180  C20  5GK  24  
5GK  C21  C21  C  0  1  Y  N  N  86.422  114.626  96.120   4.652   0.139  -0.358  C21  5GK  25  
5GK  C22  C22  C  0  1  N  N  N  87.488  117.152  93.794   1.270   0.309  -1.410  C22  5GK  26  
5GK  C23  C23  C  0  1  N  N  N  87.338  117.943  92.436   0.278   1.314  -1.998  C23  5GK  27  
5GK  F01  F1   F  0  1  N  N  N  85.868  113.989  98.522   7.515   0.562   0.214  F01  5GK  28  
5GK  F02  F2   F  0  1  N  N  N  85.824  111.840  97.913   7.711  -1.699   0.477  F02  5GK  29  
5GK  F03  F3   F  0  1  N  N  N  87.776  112.810  98.477   7.161  -0.830  -1.563  F03  5GK  30  
5GK  H1   H1   H  0  1  N  N  N  86.773  116.922  83.331  -8.399  -1.233   1.229  H1   5GK  31  
5GK  H2   H2   H  0  1  N  N  N  87.040  121.096  84.285  -6.586  -1.441  -2.508  H2   5GK  32  
5GK  H4   H4   H  0  1  N  N  N  86.915  120.539  86.709  -4.746  -0.060  -1.650  H4   5GK  33  
5GK  H6   H6   H  0  1  N  N  N  86.656  116.306  85.744  -6.666   0.105   2.146  H6   5GK  34  
5GK  H7   H7   H  0  1  N  N  N  87.359  118.783  88.439  -4.853   1.550   1.705  H7   5GK  35  
5GK  H8   H8   H  0  1  N  N  N  85.665  118.219  88.241  -4.117   1.618   0.085  H8   5GK  36  
5GK  H9   H9   H  0  1  N  N  N  85.298  117.083  88.971  -2.874   1.382   2.901  H9   5GK  37  
5GK  H10  H10  H  0  1  N  N  N  85.579  115.664  87.906  -1.634   0.177   2.475  H10  5GK  38  
5GK  H11  H11  H  0  1  N  N  N  85.123  115.229  90.356  -0.960   2.421   1.691  H11  5GK  39  
5GK  H12  H12  H  0  1  N  N  N  86.552  114.422  89.626  -2.476   2.565   0.769  H12  5GK  40  
5GK  H13  H13  H  0  1  N  N  N  88.726  115.208  90.140  -2.864   1.070  -1.131  H13  5GK  41  
5GK  H14  H14  H  0  1  N  N  N  88.894  116.742  91.059  -1.624  -0.134  -1.556  H14  5GK  42  
5GK  H15  H15  H  0  1  N  N  N  89.049  116.708  88.385  -2.023  -1.317   0.576  H15  5GK  43  
5GK  H16  H16  H  0  1  N  N  N  88.266  118.069  89.258  -3.539  -1.173  -0.347  H16  5GK  44  
5GK  H17  H17  H  0  1  N  N  N  86.287  117.918  90.583  -1.098   2.810  -1.284  H17  5GK  45  
5GK  H18  H18  H  0  1  N  N  N  84.694  118.071  92.386   1.205   3.533  -0.713  H18  5GK  46  
5GK  H19  H19  H  0  1  N  N  N  84.378  116.631  91.361   0.198   3.395   0.748  H19  5GK  47  
5GK  H20  H20  H  0  1  N  N  N  84.141  116.310  93.883   2.426   2.366   1.102  H20  5GK  48  
5GK  H21  H21  H  0  1  N  N  N  85.185  115.134  93.016   1.136   1.141   1.182  H21  5GK  49  
5GK  H22  H22  H  0  1  N  N  N  85.840  116.986  95.217   2.866   1.748  -1.258  H22  5GK  50  
5GK  H23  H23  H  0  1  N  N  N  87.317  114.632  92.760   1.820  -0.983   1.092  H23  5GK  51  
5GK  H24  H24  H  0  1  N  N  N  88.040  112.212  93.444   3.416  -2.601   2.039  H24  5GK  52  
5GK  H25  H25  H  0  1  N  N  N  87.712  111.491  95.718   5.804  -2.462   1.454  H25  5GK  53  
5GK  H26  H26  H  0  1  N  N  N  85.974  115.289  96.845   4.999   0.907  -1.033  H26  5GK  54  
5GK  H27  H27  H  0  1  N  N  N  88.257  116.379  93.647   1.747  -0.246  -2.217  H27  5GK  55  
5GK  H28  H28  H  0  1  N  N  N  87.827  117.865  94.560   0.740  -0.384  -0.756  H28  5GK  56  
5GK  H29  H29  H  0  1  N  N  N  88.332  118.045  91.977  -0.481   0.783  -2.572  H29  5GK  57  
5GK  H30  H30  H  0  1  N  N  N  86.930  118.941  92.654   0.808   2.007  -2.652  H30  5GK  58  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
5GK  O01  C01  DOUB  N  N   1  
5GK  C01  N01  SING  N  N   2  
5GK  C01  C02  SING  N  N   3  
5GK  N01  C04  SING  N  N   4  
5GK  C02  C03  DOUB  N  N   5  
5GK  C04  C05  DOUB  N  N   6  
5GK  C03  C05  SING  N  N   7  
5GK  C05  C06  SING  N  N   8  
5GK  C06  N02  SING  N  N   9  
5GK  N02  C07  SING  N  N  10  
5GK  N02  C10  SING  N  N  11  
5GK  C07  C08  SING  N  N  12  
5GK  C10  C09  SING  N  N  13  
5GK  C08  N03  SING  N  N  14  
5GK  C09  N03  SING  N  N  15  
5GK  N03  C11  SING  N  N  16  
5GK  C11  C12  SING  N  N  17  
5GK  C11  C23  SING  N  N  18  
5GK  C12  C13  SING  N  N  19  
5GK  C23  C22  SING  N  N  20  
5GK  C13  C14  SING  N  N  21  
5GK  C16  C17  DOUB  Y  N  22  
5GK  C16  C15  SING  Y  N  23  
5GK  C22  C14  SING  N  N  24  
5GK  C17  C18  SING  Y  N  25  
5GK  C14  C15  SING  N  N  26  
5GK  C15  C21  DOUB  Y  N  27  
5GK  C18  C19  DOUB  Y  N  28  
5GK  C21  C19  SING  Y  N  29  
5GK  C19  C20  SING  N  N  30  
5GK  C20  F02  SING  N  N  31  
5GK  C20  F03  SING  N  N  32  
5GK  C20  F01  SING  N  N  33  
5GK  N01  H1   SING  N  N  34  
5GK  C02  H2   SING  N  N  35  
5GK  C03  H4   SING  N  N  36  
5GK  C04  H6   SING  N  N  37  
5GK  C06  H7   SING  N  N  38  
5GK  C06  H8   SING  N  N  39  
5GK  C07  H9   SING  N  N  40  
5GK  C07  H10  SING  N  N  41  
5GK  C08  H11  SING  N  N  42  
5GK  C08  H12  SING  N  N  43  
5GK  C09  H13  SING  N  N  44  
5GK  C09  H14  SING  N  N  45  
5GK  C10  H15  SING  N  N  46  
5GK  C10  H16  SING  N  N  47  
5GK  C11  H17  SING  N  N  48  
5GK  C12  H18  SING  N  N  49  
5GK  C12  H19  SING  N  N  50  
5GK  C13  H20  SING  N  N  51  
5GK  C13  H21  SING  N  N  52  
5GK  C14  H22  SING  N  N  53  
5GK  C16  H23  SING  N  N  54  
5GK  C17  H24  SING  N  N  55  
5GK  C18  H25  SING  N  N  56  
5GK  C21  H26  SING  N  N  57  
5GK  C22  H27  SING  N  N  58  
5GK  C22  H28  SING  N  N  59  
5GK  C23  H29  SING  N  N  60  
5GK  C23  H30  SING  N  N  61  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
5GK  SMILES            ACDLabs               12.01  "C1(NC=C(C=C1)CN4CCN(C3CCC(c2cc(ccc2)C(F)(F)F)CC3)CC4)=O"  
5GK  InChI             InChI                 1.03   "InChI=1S/C23H28F3N3O/c24-23(25,26)20-3-1-2-19(14-20)18-5-7-21(8-6-18)29-12-10-28(11-13-29)16-17-4-9-22(30)27-15-17/h1-4,9,14-15,18,21H,5-8,10-13,16H2,(H,27,30)/t18-,21+"  
5GK  InChIKey          InChI                 1.03   DMSJDEOGYRYVRN-RVWIWJKTSA-N  
5GK  SMILES_CANONICAL  CACTVS                3.385  "FC(F)(F)c1cccc(c1)[C@@H]2CC[C@@H](CC2)N3CCN(CC3)CC4=CNC(=O)C=C4"  
5GK  SMILES            CACTVS                3.385  "FC(F)(F)c1cccc(c1)[CH]2CC[CH](CC2)N3CCN(CC3)CC4=CNC(=O)C=C4"  
5GK  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1cc(cc(c1)C(F)(F)F)C2CCC(CC2)N3CCN(CC3)CC4=CNC(=O)C=C4"  
5GK  SMILES            "OpenEye OEToolkits"  2.0.7  "c1cc(cc(c1)C(F)(F)F)C2CCC(CC2)N3CCN(CC3)CC4=CNC(=O)C=C4"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
5GK  "SYSTEMATIC NAME"  ACDLabs               12.01  "5-[(4-{cis-4-[3-(trifluoromethyl)phenyl]cyclohexyl}piperazin-1-yl)methyl]pyridin-2(1H)-one"  
5GK  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "5-[[4-[4-[3-(trifluoromethyl)phenyl]cyclohexyl]piperazin-1-yl]methyl]-1~{H}-pyridin-2-one"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
5GK  "Create component"  2020-09-16  RCSB  
5GK  "Initial release"   2020-12-09  RCSB  
##
