data_1LK
#

_chem_comp.id                                   1LK
_chem_comp.name                                 "1,4-anhydro-2-deoxy-2-fluoro-5-O-[(S)-hydroxy(phosphonooxy)phosphoryl]-D-arabinitol"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C5 H11 F O9 P2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-06-23
_chem_comp.pdbx_modified_date                   2022-03-18
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       296.081
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    1LK
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7NAJ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
1LK  C1   C1   C  0  1  N  N  R  13.611  23.534  -4.508  -4.839  -0.600   0.168  C1   1LK   1  
1LK  C2   C2   C  0  1  N  N  R  13.006  24.923  -4.525  -4.027   0.687  -0.120  C2   1LK   2  
1LK  C3   C3   C  0  1  N  N  R  11.527  24.702  -4.227  -2.680   0.170  -0.659  C3   1LK   3  
1LK  C4   C4   C  0  1  N  N  N  10.684  25.638  -5.061  -1.537   0.678   0.221  C4   1LK   4  
1LK  O1   O1   O  0  1  N  N  N   9.326  25.754  -4.602  -0.286   0.292  -0.351  O1   1LK   5  
1LK  O2   O2   O  0  1  N  N  N   8.708  28.172  -4.813   1.165   0.176   1.711  O2   1LK   6  
1LK  O3   O3   O  0  1  N  N  N   6.909  26.456  -5.203   1.337   2.258   0.294  O3   1LK   7  
1LK  O4   O4   O  0  1  N  N  N   8.783  26.687  -6.859   2.316  -0.041  -0.524  O4   1LK   8  
1LK  O5   O5   O  0  1  N  N  N   6.541  26.230  -7.998   4.468   0.678   0.582  O5   1LK   9  
1LK  C    C5   C  0  1  N  N  N  12.431  22.689  -4.980  -4.117  -1.645  -0.720  C    1LK  10  
1LK  O    O6   O  0  1  N  N  N  11.217  23.402  -4.756  -2.727  -1.266  -0.622  O    1LK  11  
1LK  F    F1   F  0  1  N  N  N  14.699  23.503  -5.404  -4.757  -0.950   1.520  F    1LK  12  
1LK  O6   O7   O  0  1  N  N  N   8.390  27.523  -9.148   3.895  -1.779   0.660  O6   1LK  13  
1LK  O7   O8   O  0  1  N  N  N   8.662  25.073  -8.726   4.656  -0.621  -1.574  O7   1LK  14  
1LK  O8   O9   O  0  1  N  N  N  13.646  25.609  -3.458  -4.687   1.485  -1.104  O8   1LK  15  
1LK  P    P1   P  0  1  N  N  N   8.381  26.839  -5.330   1.134   0.661   0.313  P    1LK  16  
1LK  P1   P2   P  0  1  N  N  N   8.011  26.365  -8.218   3.848  -0.417  -0.197  P1   1LK  17  
1LK  H1   H1   H  0  1  N  N  N  13.904  23.251  -3.486  -5.878  -0.480  -0.139  H1   1LK  18  
1LK  H2   H2   H  0  1  N  N  N  13.150  25.413  -5.499  -3.878   1.256   0.798  H2   1LK  19  
1LK  H3   H3   H  0  1  N  N  N  11.308  24.796  -3.153  -2.536   0.510  -1.685  H3   1LK  20  
1LK  H5   H4   H  0  1  N  N  N  10.671  25.265  -6.096  -1.586   1.765   0.288  H5   1LK  21  
1LK  H6   H5   H  0  1  N  N  N  11.146  26.636  -5.037  -1.628   0.249   1.219  H6   1LK  22  
1LK  H7   H6   H  0  1  N  N  N   6.430  27.168  -4.796   1.328   2.645  -0.592  H7   1LK  23  
1LK  H4   H7   H  0  1  N  N  N  12.410  21.743  -4.419  -4.269  -2.651  -0.329  H4   1LK  24  
1LK  H11  H8   H  0  1  N  N  N  12.539  22.476  -6.054  -4.462  -1.577  -1.751  H11  1LK  25  
1LK  H8   H9   H  0  1  N  N  N   7.602  27.971  -9.434   3.504  -2.541   0.209  H8   1LK  26  
1LK  H9   H10  H  0  1  N  N  N   8.000  24.397  -8.814   5.588  -0.849  -1.453  H9   1LK  27  
1LK  H10  H11  H  0  1  N  N  N  13.313  26.497  -3.407  -5.566   1.789  -0.839  H10  1LK  28  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
1LK  O6  P1   SING  N  N   1  
1LK  O7  P1   SING  N  N   2  
1LK  P1  O5   DOUB  N  N   3  
1LK  P1  O4   SING  N  N   4  
1LK  O4  P    SING  N  N   5  
1LK  F   C1   SING  N  N   6  
1LK  P   O3   SING  N  N   7  
1LK  P   O2   DOUB  N  N   8  
1LK  P   O1   SING  N  N   9  
1LK  C4  O1   SING  N  N  10  
1LK  C4  C3   SING  N  N  11  
1LK  C   O    SING  N  N  12  
1LK  C   C1   SING  N  N  13  
1LK  O   C3   SING  N  N  14  
1LK  C2  C1   SING  N  N  15  
1LK  C2  C3   SING  N  N  16  
1LK  C2  O8   SING  N  N  17  
1LK  C1  H1   SING  N  N  18  
1LK  C2  H2   SING  N  N  19  
1LK  C3  H3   SING  N  N  20  
1LK  C4  H5   SING  N  N  21  
1LK  C4  H6   SING  N  N  22  
1LK  O3  H7   SING  N  N  23  
1LK  C   H4   SING  N  N  24  
1LK  C   H11  SING  N  N  25  
1LK  O6  H8   SING  N  N  26  
1LK  O7  H9   SING  N  N  27  
1LK  O8  H10  SING  N  N  28  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
1LK  SMILES            ACDLabs               12.01  "OC1C(COP(=O)(O)OP(=O)(O)O)OCC1F"  
1LK  InChI             InChI                 1.03   "InChI=1S/C5H11FO9P2/c6-3-1-13-4(5(3)7)2-14-17(11,12)15-16(8,9)10/h3-5,7H,1-2H2,(H,11,12)(H2,8,9,10)/t3-,4-,5+/m1/s1"  
1LK  InChIKey          InChI                 1.03   JLUFHMADAUUBBV-WDCZJNDASA-N  
1LK  SMILES_CANONICAL  CACTVS                3.385  "O[C@H]1[C@H](F)CO[C@@H]1CO[P](O)(=O)O[P](O)(O)=O"  
1LK  SMILES            CACTVS                3.385  "O[CH]1[CH](F)CO[CH]1CO[P](O)(=O)O[P](O)(O)=O"  
1LK  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C1[C@H]([C@@H]([C@H](O1)COP(=O)(O)OP(=O)(O)O)O)F"  
1LK  SMILES            "OpenEye OEToolkits"  2.0.7  "C1C(C(C(O1)COP(=O)(O)OP(=O)(O)O)O)F"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
1LK  "SYSTEMATIC NAME"  ACDLabs               12.01  "1,4-anhydro-2-deoxy-2-fluoro-5-O-[(S)-hydroxy(phosphonooxy)phosphoryl]-D-arabinitol"  
1LK  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "[(2~{R},3~{R},4~{R})-4-fluoranyl-3-oxidanyl-oxolan-2-yl]methyl phosphono hydrogen phosphate"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
1LK  "Create component"  2021-06-23  RCSB  
1LK  "Initial release"   2022-03-23  RCSB  
##
