data_YSJ
#

_chem_comp.id                                   YSJ
_chem_comp.name                                 "5-(3-{3-chloro-5-[(2-chlorophenyl)methoxy]-4-fluorophenyl}-2-oxo-2H-[1,3'-bipyridin]-5-yl)pyrimidine-2,4(1H,3H)-dione"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C27 H17 Cl2 F N4 O4"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-03-30
_chem_comp.pdbx_modified_date                   2021-06-25
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       551.353
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    YSJ
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7M8P
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
YSJ  C10  C1   C   0  1  N  N  N  -25.612  -4.859  -23.357   6.363   1.374  -2.806  C10  YSJ   1  
YSJ  C11  C2   C   0  1  N  N  N  -21.151  -4.841  -25.870   3.221  -1.220   0.179  C11  YSJ   2  
YSJ  C12  C3   C   0  1  Y  N  N  -18.835  -5.036  -26.430   2.294  -2.935   1.551  C12  YSJ   3  
YSJ  C14  C4   C   0  1  Y  N  N  -16.235  -5.307  -25.682   2.518  -5.357   2.773  C14  YSJ   4  
YSJ  C15  C5   C   0  1  Y  N  N  -17.038  -6.439  -25.778   1.996  -5.301   1.493  C15  YSJ   5  
YSJ  C16  C6   C   0  1  Y  N  N  -18.373  -6.309  -26.155   1.878  -4.073   0.864  C16  YSJ   6  
YSJ  C18  C7   C   0  1  Y  N  N  -21.757  -5.009  -30.872  -1.457   0.757   0.308  C18  YSJ   7  
YSJ  C19  C8   C   0  1  Y  N  N  -22.051  -4.790  -32.205  -2.585   1.531   0.524  C19  YSJ   8  
YSJ  C20  C9   C   0  1  N  N  N  -20.349  -6.259  -33.146  -3.824  -0.124  -0.651  C20  YSJ   9  
YSJ  C22  C10  C   0  1  Y  N  N  -19.694  -6.032  -35.580  -5.515  -1.573  -1.797  C22  YSJ  10  
YSJ  C23  C11  C   0  1  Y  N  N  -19.486  -6.536  -36.862  -6.812  -1.844  -2.195  C23  YSJ  11  
YSJ  C24  C12  C   0  1  Y  N  N  -19.702  -7.885  -37.110  -7.827  -0.956  -1.891  C24  YSJ  12  
YSJ  C26  C13  C   0  1  Y  N  N  -20.328  -8.208  -34.799  -6.252   0.470  -0.787  C26  YSJ  13  
YSJ  C27  C14  C   0  1  Y  N  N  -22.742  -3.626  -32.557  -2.483   2.729   1.220  C27  YSJ  14  
YSJ  C1   C15  C   0  1  Y  N  N  -23.108  -2.692  -31.608  -1.254   3.154   1.698  C1   YSJ  15  
YSJ  C13  C16  C   0  1  Y  N  N  -17.991  -3.930  -26.317   2.808  -3.072   2.833  C13  YSJ  16  
YSJ  C17  C17  C   0  1  N  N  N  -20.467  -4.582  -28.100   1.101  -0.923   1.159  C17  YSJ  17  
YSJ  C2   C18  C   0  1  Y  N  N  -22.798  -2.913  -30.275  -0.125   2.388   1.486  C2   YSJ  18  
YSJ  C21  C19  C   0  1  Y  N  N  -20.103  -6.858  -34.540  -5.236  -0.417  -1.090  C21  YSJ  19  
YSJ  C25  C20  C   0  1  Y  N  N  -20.119  -8.719  -36.080  -7.546   0.202  -1.190  C25  YSJ  20  
YSJ  C3   C21  C   0  1  Y  N  N  -22.128  -4.075  -29.920  -0.221   1.184   0.788  C3   YSJ  21  
YSJ  C4   C22  C   0  1  N  N  N  -21.781  -4.342  -28.474   0.989   0.357   0.565  C4   YSJ  22  
YSJ  C5   C23  C   0  1  N  N  N  -22.797  -4.373  -27.525   2.020   0.825  -0.231  C5   YSJ  23  
YSJ  C6   C24  C   0  1  N  N  N  -22.475  -4.614  -26.200   3.156   0.014  -0.423  C6   YSJ  24  
YSJ  C7   C25  C   0  1  N  N  N  -23.581  -4.665  -25.142   4.277   0.490  -1.271  C7   YSJ  25  
YSJ  C8   C26  C   0  1  N  N  N  -23.456  -4.108  -23.869   5.036   1.694  -0.909  C8   YSJ  26  
YSJ  C9   C27  C   0  1  N  N  N  -24.762  -5.327  -25.459   4.628  -0.179  -2.405  C9   YSJ  27  
YSJ  F1   F1   F   0  1  N  N  N  -23.085  -3.333  -33.835  -3.585   3.483   1.430  F1   YSJ  28  
YSJ  N1   N1   N   0  1  N  N  N  -24.476  -4.215  -23.008   6.055   2.081  -1.705  N1   YSJ  29  
YSJ  N2   N2   N   0  1  N  N  N  -25.751  -5.406  -24.567   5.676   0.274  -3.156  N2   YSJ  30  
YSJ  N3   N3   N   0  1  N  N  N  -20.202  -4.819  -26.813   2.200  -1.671   0.954  N3   YSJ  31  
YSJ  N4   N4   N   0  1  Y  N  N  -16.710  -4.080  -25.947   2.903  -4.260   3.396  N4   YSJ  32  
YSJ  O1   O1   O   0  1  N  N  N  -22.293  -3.444  -23.476   4.759   2.324   0.095  O1   YSJ  33  
YSJ  O2   O2   O   0  1  N  N  N  -26.676  -4.971  -22.453   7.285   1.743  -3.507  O2   YSJ  34  
YSJ  O3   O3   O   0  1  N  N  N  -19.411  -4.579  -29.035   0.197  -1.349   1.859  O3   YSJ  35  
YSJ  O4   O4   O   0  1  N  N  N  -21.674  -5.753  -33.156  -3.793   1.117   0.056  O4   YSJ  36  
YSJ  CL1  CL1  CL  0  0  N  N  N  -23.983  -1.238  -32.179  -1.134   4.653   2.566  CL1  YSJ  37  
YSJ  CL2  CL2  CL  0  0  N  N  N  -19.411  -4.305  -35.240  -4.239  -2.687  -2.178  CL2  YSJ  38  
YSJ  H6   H1   H   0  1  N  N  N  -20.881  -5.038  -24.843   4.093  -1.841   0.031  H6   YSJ  39  
YSJ  H8   H2   H   0  1  N  N  N  -15.202  -5.418  -25.386   2.612  -6.312   3.268  H8   YSJ  40  
YSJ  H9   H3   H   0  1  N  N  N  -16.628  -7.414  -25.561   1.684  -6.205   0.991  H9   YSJ  41  
YSJ  H10  H4   H   0  1  N  N  N  -19.021  -7.169  -26.229   1.473  -4.000  -0.135  H10  YSJ  42  
YSJ  H11  H5   H   0  1  N  N  N  -21.238  -5.908  -30.574  -1.536  -0.176  -0.229  H11  YSJ  43  
YSJ  H13  H6   H   0  1  N  N  N  -20.244  -7.036  -32.374  -3.474  -0.924   0.003  H13  YSJ  44  
YSJ  H12  H7   H   0  1  N  N  N  -19.633  -5.447  -32.949  -3.177  -0.061  -1.525  H12  YSJ  45  
YSJ  H14  H8   H   0  1  N  N  N  -19.159  -5.882  -37.657  -7.031  -2.748  -2.743  H14  YSJ  46  
YSJ  H15  H9   H   0  1  N  N  N  -19.546  -8.285  -38.101  -8.840  -1.168  -2.202  H15  YSJ  47  
YSJ  H17  H10  H   0  1  N  N  N  -20.665  -8.860  -34.007  -6.034   1.373  -0.235  H17  YSJ  48  
YSJ  H7   H11  H   0  1  N  N  N  -18.373  -2.943  -26.530   3.134  -2.196   3.375  H7   YSJ  49  
YSJ  H1   H12  H   0  1  N  N  N  -23.075  -2.190  -29.522   0.832   2.722   1.859  H1   YSJ  50  
YSJ  H16  H13  H   0  1  N  N  N  -20.282  -9.769  -36.272  -8.340   0.895  -0.953  H16  YSJ  51  
YSJ  H2   H14  H   0  1  N  N  N  -23.824  -4.211  -27.818   1.954   1.797  -0.698  H2   YSJ  52  
YSJ  H4   H15  H   0  1  N  N  N  -24.879  -5.780  -26.433   4.090  -1.068  -2.701  H4   YSJ  53  
YSJ  H3   H16  H   0  1  N  N  N  -24.396  -3.814  -22.096   6.568   2.874  -1.481  H3   YSJ  54  
YSJ  H5   H17  H   0  1  N  N  N  -26.600  -5.877  -24.806   5.930  -0.209  -3.958  H5   YSJ  55  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
YSJ  C24  C23  DOUB  Y  N   1  
YSJ  C24  C25  SING  Y  N   2  
YSJ  C23  C22  SING  Y  N   3  
YSJ  C25  C26  DOUB  Y  N   4  
YSJ  C22  CL2  SING  N  N   5  
YSJ  C22  C21  DOUB  Y  N   6  
YSJ  C26  C21  SING  Y  N   7  
YSJ  C21  C20  SING  N  N   8  
YSJ  F1   C27  SING  N  N   9  
YSJ  O4   C20  SING  N  N  10  
YSJ  O4   C19  SING  N  N  11  
YSJ  C27  C19  DOUB  Y  N  12  
YSJ  C27  C1   SING  Y  N  13  
YSJ  C19  C18  SING  Y  N  14  
YSJ  CL1  C1   SING  N  N  15  
YSJ  C1   C2   DOUB  Y  N  16  
YSJ  C18  C3   DOUB  Y  N  17  
YSJ  C2   C3   SING  Y  N  18  
YSJ  C3   C4   SING  N  N  19  
YSJ  O3   C17  DOUB  N  N  20  
YSJ  C4   C17  SING  N  N  21  
YSJ  C4   C5   DOUB  N  N  22  
YSJ  C17  N3   SING  N  N  23  
YSJ  C5   C6   SING  N  N  24  
YSJ  N3   C12  SING  N  N  25  
YSJ  N3   C11  SING  N  N  26  
YSJ  C12  C13  DOUB  Y  N  27  
YSJ  C12  C16  SING  Y  N  28  
YSJ  C13  N4   SING  Y  N  29  
YSJ  C6   C11  DOUB  N  N  30  
YSJ  C6   C7   SING  N  N  31  
YSJ  C16  C15  DOUB  Y  N  32  
YSJ  N4   C14  DOUB  Y  N  33  
YSJ  C15  C14  SING  Y  N  34  
YSJ  C9   C7   DOUB  N  N  35  
YSJ  C9   N2   SING  N  N  36  
YSJ  C7   C8   SING  N  N  37  
YSJ  N2   C10  SING  N  N  38  
YSJ  C8   O1   DOUB  N  N  39  
YSJ  C8   N1   SING  N  N  40  
YSJ  C10  N1   SING  N  N  41  
YSJ  C10  O2   DOUB  N  N  42  
YSJ  C11  H6   SING  N  N  43  
YSJ  C14  H8   SING  N  N  44  
YSJ  C15  H9   SING  N  N  45  
YSJ  C16  H10  SING  N  N  46  
YSJ  C18  H11  SING  N  N  47  
YSJ  C20  H13  SING  N  N  48  
YSJ  C20  H12  SING  N  N  49  
YSJ  C23  H14  SING  N  N  50  
YSJ  C24  H15  SING  N  N  51  
YSJ  C26  H17  SING  N  N  52  
YSJ  C13  H7   SING  N  N  53  
YSJ  C2   H1   SING  N  N  54  
YSJ  C25  H16  SING  N  N  55  
YSJ  C5   H2   SING  N  N  56  
YSJ  C9   H4   SING  N  N  57  
YSJ  N1   H3   SING  N  N  58  
YSJ  N2   H5   SING  N  N  59  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
YSJ  SMILES            ACDLabs               12.01  "Clc1ccccc1COc1cc(cc(Cl)c1F)C1=CC(=CN(c2cnccc2)C1=O)C1=CNC(=O)NC1=O"  
YSJ  InChI             InChI                 1.03   "InChI=1S/C27H17Cl2FN4O4/c28-21-6-2-1-4-15(21)14-38-23-10-16(9-22(29)24(23)30)19-8-17(20-12-32-27(37)33-25(20)35)13-34(26(19)36)18-5-3-7-31-11-18/h1-13H,14H2,(H2,32,33,35,37)"  
YSJ  InChIKey          InChI                 1.03   FBYZCSUBKCAJAK-UHFFFAOYSA-N  
YSJ  SMILES_CANONICAL  CACTVS                3.385  "Fc1c(Cl)cc(cc1OCc2ccccc2Cl)C3=CC(=CN(C3=O)c4cccnc4)C5=CNC(=O)NC5=O"  
YSJ  SMILES            CACTVS                3.385  "Fc1c(Cl)cc(cc1OCc2ccccc2Cl)C3=CC(=CN(C3=O)c4cccnc4)C5=CNC(=O)NC5=O"  
YSJ  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1ccc(c(c1)COc2cc(cc(c2F)Cl)C3=CC(=CN(C3=O)c4cccnc4)C5=CNC(=O)NC5=O)Cl"  
YSJ  SMILES            "OpenEye OEToolkits"  2.0.7  "c1ccc(c(c1)COc2cc(cc(c2F)Cl)C3=CC(=CN(C3=O)c4cccnc4)C5=CNC(=O)NC5=O)Cl"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
YSJ  "SYSTEMATIC NAME"  ACDLabs               12.01  "5-(3-{3-chloro-5-[(2-chlorophenyl)methoxy]-4-fluorophenyl}-2-oxo-2H-[1,3'-bipyridin]-5-yl)pyrimidine-2,4(1H,3H)-dione"  
YSJ  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "5-[5-[3-chloranyl-5-[(2-chlorophenyl)methoxy]-4-fluoranyl-phenyl]-6-oxidanylidene-1-pyridin-3-yl-pyridin-3-yl]-1~{H}-pyrimidine-2,4-dione"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
YSJ  "Create component"  2021-03-30  RCSB  
YSJ  "Initial release"   2021-06-30  RCSB  
##
