data_XYJ
#

_chem_comp.id                                   XYJ
_chem_comp.name                                 "3-[(1,3-dimethyl-2,6-dioxo-2,3,6,9-tetrahydro-1H-purin-8-yl)sulfanyl]-N-{[2-(morpholin-4-yl)ethyl]sulfonyl}propanamide"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C16 H24 N6 O6 S2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2021-01-20
_chem_comp.pdbx_modified_date                   2021-02-12
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       460.528
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    XYJ
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       7LG7
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
XYJ  C10  C1   C  0  1  N  N  N  35.398  -38.292   8.092  -1.657   2.031  -0.187  C10  XYJ   1  
XYJ  C13  C2   C  0  1  N  N  N  37.368  -39.727   5.935  -4.446   0.403  -0.023  C13  XYJ   2  
XYJ  C17  C3   C  0  1  N  N  N  40.719  -38.552   3.648  -6.455  -2.714   2.140  C17  XYJ   3  
XYJ  C20  C4   C  0  1  N  N  N  39.133  -40.713   2.784  -6.858  -2.409  -0.668  C20  XYJ   4  
XYJ  C26  C5   C  0  1  N  N  N  33.451  -32.041  11.871   7.688   0.522   1.304  C26  XYJ   5  
XYJ  C02  C6   C  0  1  N  N  N  34.049  -31.703   7.789   4.809  -1.680  -0.856  C02  XYJ   6  
XYJ  C03  C7   C  0  1  Y  N  N  33.631  -32.859   8.302   4.408  -0.448  -0.176  C03  XYJ   7  
XYJ  C04  C8   C  0  1  Y  N  N  33.435  -32.971   9.617   5.372   0.259   0.528  C04  XYJ   8  
XYJ  C06  C9   C  0  1  Y  N  N  32.992  -34.856   8.714   3.431   1.294   0.678  C06  XYJ   9  
XYJ  C08  C10  C  0  1  N  N  N  33.562  -37.440   9.684   0.764   1.753   0.271  C08  XYJ  10  
XYJ  C09  C11  C  0  1  N  N  N  35.065  -37.511   9.373  -0.464   2.633   0.510  C09  XYJ  11  
XYJ  C14  C12  C  0  1  N  N  N  37.821  -40.653   4.807  -5.647  -0.312  -0.647  C14  XYJ  12  
XYJ  C16  C13  C  0  1  N  N  N  39.848  -39.357   4.601  -6.290  -1.363   1.438  C16  XYJ  13  
XYJ  C19  C14  C  0  1  N  N  N  40.009  -39.896   1.847  -7.018  -3.750   0.054  C19  XYJ  14  
XYJ  C27  C15  C  0  1  N  N  N  34.082  -30.759   9.907   6.994  -1.354  -0.074  C27  XYJ  15  
XYJ  C29  C16  C  0  1  N  N  N  34.737  -29.367   8.017   6.523  -3.305  -1.441  C29  XYJ  16  
XYJ  N05  N1   N  0  1  Y  N  N  33.018  -34.210   9.875   4.745   1.348   1.057  N05  XYJ  17  
XYJ  N11  N2   N  0  1  N  N  N  35.846  -39.543   8.341  -2.858   2.639  -0.114  N11  XYJ  18  
XYJ  N15  N3   N  0  1  N  N  N  38.670  -39.877   3.895  -5.872  -1.587   0.047  N15  XYJ  19  
XYJ  N24  N4   N  0  1  Y  N  N  33.342  -34.030   7.735   3.235   0.226  -0.054  N24  XYJ  20  
XYJ  N25  N5   N  0  1  N  N  N  33.664  -31.922  10.417   6.663  -0.218   0.563  N25  XYJ  21  
XYJ  N28  N6   N  0  1  N  N  N  34.275  -30.651   8.588   6.098  -2.074  -0.769  N28  XYJ  22  
XYJ  O01  O1   O  0  1  N  N  N  34.232  -31.586   6.578   3.997  -2.338  -1.482  O01  XYJ  23  
XYJ  O18  O2   O  0  1  N  N  N  41.153  -39.391   2.562  -7.395  -3.511   1.413  O18  XYJ  24  
XYJ  O21  O3   O  0  1  N  N  N  37.044  -41.766   7.722  -3.720   1.750  -2.209  O21  XYJ  25  
XYJ  O22  O4   O  0  1  N  N  N  35.041  -41.124   6.388  -5.227   2.886  -0.610  O22  XYJ  26  
XYJ  O23  O5   O  0  1  N  N  N  35.268  -37.784   6.979  -1.536   1.002  -0.817  O23  XYJ  27  
XYJ  O30  O6   O  0  1  N  N  N  34.287  -29.798  10.646   8.145  -1.743  -0.021  O30  XYJ  28  
XYJ  S07  S1   S  0  1  N  N  N  32.467  -36.562   8.503   2.197   2.476   1.108  S07  XYJ  29  
XYJ  S12  S2   S  0  1  N  N  N  36.274  -40.592   7.115  -4.168   1.978  -0.880  S12  XYJ  30  
XYJ  H1   H1   H  0  1  N  N  N  38.254  -39.359   6.473  -4.644   0.593   1.031  H1   XYJ  31  
XYJ  H2   H2   H  0  1  N  N  N  36.823  -38.876   5.501  -3.560  -0.224  -0.119  H2   XYJ  32  
XYJ  H3   H3   H  0  1  N  N  N  41.597  -38.171   4.189  -5.494  -3.226   2.175  H3   XYJ  33  
XYJ  H4   H4   H  0  1  N  N  N  40.139  -37.707   3.248  -6.820  -2.555   3.155  H4   XYJ  34  
XYJ  H5   H5   H  0  1  N  N  N  38.264  -41.095   2.229  -6.516  -2.584  -1.688  H5   XYJ  35  
XYJ  H6   H6   H  0  1  N  N  N  39.714  -41.558   3.182  -7.817  -1.891  -0.690  H6   XYJ  36  
XYJ  H7   H7   H  0  1  N  N  N  33.690  -31.083  12.357   7.720   0.167   2.333  H7   XYJ  37  
XYJ  H8   H8   H  0  1  N  N  N  32.400  -32.300  12.068   8.659   0.365   0.835  H8   XYJ  38  
XYJ  H9   H9   H  0  1  N  N  N  34.104  -32.829  12.274   7.447   1.585   1.293  H9   XYJ  39  
XYJ  H10  H10  H  0  1  N  N  N  33.455  -36.942  10.659   0.578   0.754   0.666  H10  XYJ  40  
XYJ  H11  H11  H  0  1  N  N  N  33.196  -38.475   9.759   0.962   1.689  -0.799  H11  XYJ  41  
XYJ  H12  H12  H  0  1  N  N  N  35.571  -38.000  10.218  -0.278   3.632   0.114  H12  XYJ  42  
XYJ  H13  H13  H  0  1  N  N  N  35.445  -36.485   9.262  -0.663   2.697   1.580  H13  XYJ  43  
XYJ  H14  H14  H  0  1  N  N  N  36.944  -41.037   4.265  -6.533   0.315  -0.551  H14  XYJ  44  
XYJ  H15  H15  H  0  1  N  N  N  38.393  -41.496   5.223  -5.448  -0.502  -1.702  H15  XYJ  45  
XYJ  H16  H16  H  0  1  N  N  N  40.431  -40.198   5.003  -7.240  -0.828   1.451  H16  XYJ  46  
XYJ  H17  H17  H  0  1  N  N  N  39.520  -38.710   5.428  -5.534  -0.774   1.957  H17  XYJ  47  
XYJ  H18  H18  H  0  1  N  N  N  39.427  -39.052   1.447  -7.790  -4.340  -0.439  H18  XYJ  48  
XYJ  H19  H19  H  0  1  N  N  N  40.349  -40.533   1.017  -6.072  -4.292   0.029  H19  XYJ  49  
XYJ  H20  H20  H  0  1  N  N  N  34.865  -28.631   8.824   5.671  -3.754  -1.950  H20  XYJ  50  
XYJ  H21  H21  H  0  1  N  N  N  35.698  -29.519   7.503   7.300  -3.071  -2.169  H21  XYJ  51  
XYJ  H22  H22  H  0  1  N  N  N  33.992  -28.996   7.298   6.916  -4.004  -0.703  H22  XYJ  52  
XYJ  H23  H23  H  0  1  N  N  N  32.772  -34.582  10.770   5.156   2.036   1.604  H23  XYJ  53  
XYJ  H24  H24  H  0  1  N  N  N  35.923  -39.850   9.290  -2.954   3.464   0.387  H24  XYJ  54  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
XYJ  C19  O18  SING  N  N   1  
XYJ  C19  C20  SING  N  N   2  
XYJ  O18  C17  SING  N  N   3  
XYJ  C20  N15  SING  N  N   4  
XYJ  C17  C16  SING  N  N   5  
XYJ  N15  C16  SING  N  N   6  
XYJ  N15  C14  SING  N  N   7  
XYJ  C14  C13  SING  N  N   8  
XYJ  C13  S12  SING  N  N   9  
XYJ  O22  S12  DOUB  N  N  10  
XYJ  O01  C02  DOUB  N  N  11  
XYJ  O23  C10  DOUB  N  N  12  
XYJ  S12  O21  DOUB  N  N  13  
XYJ  S12  N11  SING  N  N  14  
XYJ  N24  C03  SING  Y  N  15  
XYJ  N24  C06  DOUB  Y  N  16  
XYJ  C02  C03  SING  N  N  17  
XYJ  C02  N28  SING  N  N  18  
XYJ  C29  N28  SING  N  N  19  
XYJ  C10  N11  SING  N  N  20  
XYJ  C10  C09  SING  N  N  21  
XYJ  C03  C04  DOUB  Y  N  22  
XYJ  S07  C06  SING  N  N  23  
XYJ  S07  C08  SING  N  N  24  
XYJ  N28  C27  SING  N  N  25  
XYJ  C06  N05  SING  Y  N  26  
XYJ  C09  C08  SING  N  N  27  
XYJ  C04  N05  SING  Y  N  28  
XYJ  C04  N25  SING  N  N  29  
XYJ  C27  N25  SING  N  N  30  
XYJ  C27  O30  DOUB  N  N  31  
XYJ  N25  C26  SING  N  N  32  
XYJ  C13  H1   SING  N  N  33  
XYJ  C13  H2   SING  N  N  34  
XYJ  C17  H3   SING  N  N  35  
XYJ  C17  H4   SING  N  N  36  
XYJ  C20  H5   SING  N  N  37  
XYJ  C20  H6   SING  N  N  38  
XYJ  C26  H7   SING  N  N  39  
XYJ  C26  H8   SING  N  N  40  
XYJ  C26  H9   SING  N  N  41  
XYJ  C08  H10  SING  N  N  42  
XYJ  C08  H11  SING  N  N  43  
XYJ  C09  H12  SING  N  N  44  
XYJ  C09  H13  SING  N  N  45  
XYJ  C14  H14  SING  N  N  46  
XYJ  C14  H15  SING  N  N  47  
XYJ  C16  H16  SING  N  N  48  
XYJ  C16  H17  SING  N  N  49  
XYJ  C19  H18  SING  N  N  50  
XYJ  C19  H19  SING  N  N  51  
XYJ  C29  H20  SING  N  N  52  
XYJ  C29  H21  SING  N  N  53  
XYJ  C29  H22  SING  N  N  54  
XYJ  N05  H23  SING  N  N  55  
XYJ  N11  H24  SING  N  N  56  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
XYJ  SMILES            ACDLabs               12.01  "C(NS(CCN1CCOCC1)(=O)=O)(CCSc3nc2c(C(N(C(N2C)=O)C)=O)n3)=O"  
XYJ  InChI             InChI                 1.03   "InChI=1S/C16H24N6O6S2/c1-20-13-12(14(24)21(2)16(20)25)17-15(18-13)29-9-3-11(23)19-30(26,27)10-6-22-4-7-28-8-5-22/h3-10H2,1-2H3,(H,17,18)(H,19,23)"  
XYJ  InChIKey          InChI                 1.03   JUFGUKJIZDHLKW-UHFFFAOYSA-N  
XYJ  SMILES_CANONICAL  CACTVS                3.385  "CN1C(=O)N(C)c2[nH]c(SCCC(=O)N[S](=O)(=O)CCN3CCOCC3)nc2C1=O"  
XYJ  SMILES            CACTVS                3.385  "CN1C(=O)N(C)c2[nH]c(SCCC(=O)N[S](=O)(=O)CCN3CCOCC3)nc2C1=O"  
XYJ  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CN1c2c(nc([nH]2)SCCC(=O)NS(=O)(=O)CCN3CCOCC3)C(=O)N(C1=O)C"  
XYJ  SMILES            "OpenEye OEToolkits"  2.0.7  "CN1c2c(nc([nH]2)SCCC(=O)NS(=O)(=O)CCN3CCOCC3)C(=O)N(C1=O)C"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
XYJ  "SYSTEMATIC NAME"  ACDLabs               12.01  "3-[(1,3-dimethyl-2,6-dioxo-2,3,6,9-tetrahydro-1H-purin-8-yl)sulfanyl]-N-{[2-(morpholin-4-yl)ethyl]sulfonyl}propanamide"  
XYJ  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "3-[[1,3-dimethyl-2,6-bis(oxidanylidene)-9~{H}-purin-8-yl]sulfanyl]-~{N}-(2-morpholin-4-ylethylsulfonyl)propanamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
XYJ  "Create component"  2021-01-20  RCSB  
XYJ  "Initial release"   2021-02-17  RCSB  
##
