data_XRJ
# 
_chem_comp.id                                    XRJ 
_chem_comp.name                                  "2-[(2S,3R,4R,5R)-5-(hydroxymethyl)-3,4-bis(oxidanyl)-1-pentyl-pyrrolidin-2-yl]-N-methyl-ethanamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H26 N2 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-08-05 
_chem_comp.pdbx_modified_date                    2015-11-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        274.357 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     XRJ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5ABF 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
XRJ O13  O13  O 0 1 N N N 27.665 0.216  294.064 0.643  2.352  1.332  O13  XRJ 1  
XRJ C12  C12  C 0 1 N N N 28.705 0.840  294.155 0.457  2.583  0.156  C12  XRJ 2  
XRJ N14  N14  N 0 1 N N N 29.254 1.178  295.313 1.302  3.392  -0.514 N14  XRJ 3  
XRJ C15  C15  C 0 1 N N N 28.634 0.831  296.572 2.444  3.994  0.179  C15  XRJ 4  
XRJ C11  C11  C 0 1 N N N 29.392 1.321  292.907 -0.714 1.959  -0.559 C11  XRJ 5  
XRJ C3   C3   C 0 1 N N S 28.396 2.303  292.305 -1.503 1.087  0.420  C3   XRJ 6  
XRJ C4   C4   C 0 1 N N R 29.055 3.326  291.400 -2.752 0.515  -0.276 C4   XRJ 7  
XRJ O21  O21  O 0 1 N N N 30.286 2.850  290.858 -2.793 0.932  -1.642 O21  XRJ 8  
XRJ C5   C5   C 0 1 N N R 28.036 3.633  290.325 -2.595 -1.020 -0.188 C5   XRJ 9  
XRJ O20  O20  O 0 1 N N N 27.763 5.025  290.374 -3.852 -1.641 0.089  O20  XRJ 10 
XRJ C6   C6   C 0 1 N N R 26.785 2.827  290.653 -1.620 -1.202 1.002  C6   XRJ 11 
XRJ C18  C18  C 0 1 N N N 25.992 2.391  289.414 -0.879 -2.536 0.895  C18  XRJ 12 
XRJ O19  O19  O 0 1 N N N 25.921 3.446  288.457 -0.327 -2.670 -0.417 O19  XRJ 13 
XRJ N2   N2   N 0 1 N N N 27.245 1.731  291.549 -0.678 -0.065 0.846  N2   XRJ 14 
XRJ C1   C1   C 0 1 N N N 27.418 0.403  290.904 0.355  -0.370 -0.153 C1   XRJ 15 
XRJ C7   C7   C 0 1 N N N 28.442 0.289  289.773 1.554  -1.025 0.537  C7   XRJ 16 
XRJ C8   C8   C 0 1 N N N 27.934 -0.589 288.627 2.604  -1.398 -0.511 C8   XRJ 17 
XRJ C9   C9   C 0 1 N N N 28.550 -1.981 288.651 3.803  -2.052 0.179  C9   XRJ 18 
XRJ C10  C10  C 0 1 N N N 28.142 -2.747 287.413 4.854  -2.425 -0.868 C10  XRJ 19 
XRJ H14  H14  H 0 1 N N N 30.116 1.684  295.316 1.153  3.577  -1.454 H14  XRJ 20 
XRJ H111 H111 H 0 0 N N N 30.340 1.823  293.149 -1.362 2.744  -0.949 H111 XRJ 21 
XRJ H112 H112 H 0 0 N N N 29.585 0.485  292.218 -0.351 1.344  -1.383 H112 XRJ 22 
XRJ H151 H151 H 0 0 N N N 29.252 1.205  297.401 2.085  4.611  1.003  H151 XRJ 23 
XRJ H152 H152 H 0 0 N N N 27.634 1.286  296.626 3.088  3.206  0.570  H152 XRJ 24 
XRJ H153 H153 H 0 0 N N N 28.543 -0.263 296.647 3.008  4.612  -0.519 H153 XRJ 25 
XRJ H3   H3   H 0 1 N N N 27.970 2.866  293.149 -1.798 1.677  1.288  H3   XRJ 26 
XRJ H4   H4   H 0 1 N N N 29.236 4.242  291.982 -3.655 0.836  0.244  H4   XRJ 27 
XRJ H21  H21  H 0 1 N N N 30.666 3.518  290.299 -3.558 0.602  -2.132 H21  XRJ 28 
XRJ H5   H5   H 0 1 N N N 28.426 3.335  289.340 -2.165 -1.418 -1.107 H5   XRJ 29 
XRJ H20  H20  H 0 1 N N N 27.124 5.246  289.707 -4.523 -1.491 -0.591 H20  XRJ 30 
XRJ H6   H6   H 0 1 N N N 26.125 3.481  291.242 -2.154 -1.135 1.950  H6   XRJ 31 
XRJ H181 H181 H 0 0 N N N 26.488 1.523  288.956 -0.077 -2.566 1.632  H181 XRJ 32 
XRJ H182 H182 H 0 0 N N N 24.972 2.112  289.719 -1.575 -3.354 1.081  H182 XRJ 33 
XRJ H19  H19  H 0 1 N N N 25.427 3.155  287.700 0.158  -3.495 -0.557 H19  XRJ 34 
XRJ H11C H11C H 0 0 N N N 27.716 -0.307 291.689 -0.052 -1.053 -0.899 H11C XRJ 35 
XRJ H12C H12C H 0 0 N N N 26.441 0.108  290.494 0.674  0.551  -0.639 H12C XRJ 36 
XRJ H71C H71C H 0 0 N N N 28.654 1.295  289.383 1.987  -0.326 1.253  H71C XRJ 37 
XRJ H72C H72C H 0 0 N N N 29.367 -0.151 290.174 1.226  -1.923 1.059  H72C XRJ 38 
XRJ H81C H81C H 0 0 N N N 26.841 -0.684 288.711 2.171  -2.096 -1.227 H81C XRJ 39 
XRJ H82C H82C H 0 0 N N N 28.188 -0.106 287.672 2.932  -0.499 -1.033 H82C XRJ 40 
XRJ H91C H91C H 0 0 N N N 29.646 -1.894 288.681 4.236  -1.353 0.895  H91C XRJ 41 
XRJ H92C H92C H 0 0 N N N 28.200 -2.519 289.544 3.476  -2.951 0.702  H92C XRJ 42 
XRJ H101 H101 H 0 0 N N N 28.591 -3.751 287.438 4.421  -3.123 -1.584 H101 XRJ 43 
XRJ H102 H102 H 0 0 N N N 27.046 -2.836 287.382 5.181  -1.526 -1.391 H102 XRJ 44 
XRJ H103 H103 H 0 0 N N N 28.492 -2.211 286.518 5.708  -2.891 -0.377 H103 XRJ 45 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
XRJ O13 C12  DOUB N N 1  
XRJ C12 N14  SING N N 2  
XRJ C12 C11  SING N N 3  
XRJ N14 C15  SING N N 4  
XRJ C11 C3   SING N N 5  
XRJ C3  C4   SING N N 6  
XRJ C3  N2   SING N N 7  
XRJ C4  O21  SING N N 8  
XRJ C4  C5   SING N N 9  
XRJ C5  O20  SING N N 10 
XRJ C5  C6   SING N N 11 
XRJ C6  C18  SING N N 12 
XRJ C6  N2   SING N N 13 
XRJ C18 O19  SING N N 14 
XRJ N2  C1   SING N N 15 
XRJ C1  C7   SING N N 16 
XRJ C7  C8   SING N N 17 
XRJ C8  C9   SING N N 18 
XRJ C9  C10  SING N N 19 
XRJ N14 H14  SING N N 20 
XRJ C11 H111 SING N N 21 
XRJ C11 H112 SING N N 22 
XRJ C15 H151 SING N N 23 
XRJ C15 H152 SING N N 24 
XRJ C15 H153 SING N N 25 
XRJ C3  H3   SING N N 26 
XRJ C4  H4   SING N N 27 
XRJ O21 H21  SING N N 28 
XRJ C5  H5   SING N N 29 
XRJ O20 H20  SING N N 30 
XRJ C6  H6   SING N N 31 
XRJ C18 H181 SING N N 32 
XRJ C18 H182 SING N N 33 
XRJ O19 H19  SING N N 34 
XRJ C1  H11C SING N N 35 
XRJ C1  H12C SING N N 36 
XRJ C7  H71C SING N N 37 
XRJ C7  H72C SING N N 38 
XRJ C8  H81C SING N N 39 
XRJ C8  H82C SING N N 40 
XRJ C9  H91C SING N N 41 
XRJ C9  H92C SING N N 42 
XRJ C10 H101 SING N N 43 
XRJ C10 H102 SING N N 44 
XRJ C10 H103 SING N N 45 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
XRJ InChI            InChI                1.03  "InChI=1S/C13H26N2O4/c1-3-4-5-6-15-9(7-11(17)14-2)12(18)13(19)10(15)8-16/h9-10,12-13,16,18-19H,3-8H2,1-2H3,(H,14,17)/t9-,10+,12+,13+/m0/s1" 
XRJ InChIKey         InChI                1.03  NZYWNYJYZSBEBH-XKAARJIMSA-N                                                                                                                 
XRJ SMILES_CANONICAL CACTVS               3.385 "CCCCCN1[C@H](CO)[C@@H](O)[C@H](O)[C@@H]1CC(=O)NC"                                                                                          
XRJ SMILES           CACTVS               3.385 "CCCCCN1[CH](CO)[CH](O)[CH](O)[CH]1CC(=O)NC"                                                                                                
XRJ SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "CCCCCN1[C@H]([C@H]([C@@H]([C@H]1CO)O)O)CC(=O)NC"                                                                                           
XRJ SMILES           "OpenEye OEToolkits" 1.7.6 "CCCCCN1C(C(C(C1CO)O)O)CC(=O)NC"                                                                                                            
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
XRJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "2-[(2S,3R,4R,5R)-5-(hydroxymethyl)-3,4-bis(oxidanyl)-1-pentyl-pyrrolidin-2-yl]-N-methyl-ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
XRJ "Create component" 2015-08-05 EBI  
XRJ "Initial release"  2015-11-18 RCSB 
# 
