data_W8J
#

_chem_comp.id                                   W8J
_chem_comp.name                                 "3-{3-[(3S)-oxolan-3-yl]propyl}-3H-purin-6-amine"
_chem_comp.type                                 non-polymer
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C12 H17 N5 O"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-09-29
_chem_comp.pdbx_modified_date                   2020-12-11
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       247.296
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    W8J
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5RVG
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
W8J  C10   C1   C  0  1  N  N  N  -45.864  -30.707   1.508   1.128  -0.106  -0.276  C10   W8J   1  
W8J  C13   C2   C  0  1  N  N  N  -43.531  -32.482   1.926   3.803   0.971   0.664  C13   W8J   2  
W8J  C15   C3   C  0  1  N  N  N  -41.539  -31.489   1.089   5.885  -0.115   0.574  C15   W8J   3  
W8J  C17   C4   C  0  1  Y  N  N  -47.667  -29.045   3.330  -1.599   1.546  -0.808  C17   W8J   4  
W8J  C02   C5   C  0  1  Y  N  N  -47.874  -28.899   5.649  -3.613   1.123   0.247  C02   W8J   5  
W8J  C03   C6   C  0  1  Y  N  N  -46.498  -29.113   5.772  -3.307  -0.248   0.305  C03   W8J   6  
W8J  C05   C7   C  0  1  Y  N  N  -44.439  -29.416   6.355  -3.149  -2.382   0.550  C05   W8J   7  
W8J  C07   C8   C  0  1  Y  N  N  -45.775  -29.287   4.680  -2.076  -0.684  -0.234  C07   W8J   8  
W8J  C09   C9   C  0  1  N  N  N  -45.507  -29.426   2.263   0.049  -0.158  -1.360  C09   W8J   9  
W8J  C11   C10  C  0  1  N  N  N  -44.812  -30.994   0.406   2.470  -0.535  -0.872  C11   W8J  10  
W8J  C12   C11  C  0  1  N  N  S  -43.875  -32.262   0.634   3.549  -0.483   0.212  C12   W8J  11  
W8J  C16   C12  C  0  1  N  N  N  -42.515  -32.112  -0.021   4.931  -0.896  -0.363  C16   W8J  12  
W8J  N01   N1   N  0  1  N  N  N  -48.733  -28.701   6.796  -4.797   1.593   0.758  N01   W8J  13  
W8J  N04   N2   N  0  1  Y  N  N  -45.667  -29.189   6.824  -3.925  -1.344   0.775  N04   W8J  14  
W8J  N06   N3   N  0  1  Y  N  N  -44.486  -29.466   5.027  -2.032  -1.996  -0.057  N06   W8J  15  
W8J  N08   N4   N  0  1  Y  N  N  -46.355  -29.243   3.455  -1.237   0.253  -0.790  N08   W8J  16  
W8J  N18   N5   N  0  1  Y  N  N  -48.408  -28.866   4.437  -2.736   1.962  -0.312  N18   W8J  17  
W8J  O14   O1   O  0  1  N  N  N  -42.060  -31.837   2.190   5.216   1.128   0.839  O14   W8J  18  
W8J  H101  H1   H  0  0  N  N  N  -46.854  -30.590   1.043   1.209   0.911   0.107  H101  W8J  19  
W8J  H102  H2   H  0  0  N  N  N  -45.888  -31.550   2.215   0.859  -0.780   0.537  H102  W8J  20  
W8J  H132  H3   H  0  0  N  N  N  -44.268  -32.008   2.591   3.445   1.663  -0.097  H132  W8J  21  
W8J  H131  H4   H  0  0  N  N  N  -43.502  -33.564   2.122   3.291   1.161   1.607  H131  W8J  22  
W8J  H151  H5   H  0  0  N  N  N  -40.523  -31.900   0.991   6.039  -0.666   1.502  H151  W8J  23  
W8J  H152  H6   H  0  0  N  N  N  -41.501  -30.393   1.004   6.839   0.066   0.079  H152  W8J  24  
W8J  H171  H7   H  0  0  N  N  N  -48.128  -29.029   2.353  -0.926   2.270  -1.244  H171  W8J  25  
W8J  H051  H8   H  0  0  N  N  N  -43.550  -29.539   6.956  -3.384  -3.401   0.821  H051  W8J  26  
W8J  H092  H9   H  0  0  N  N  N  -44.455  -29.479   2.579   0.318   0.517  -2.173  H092  W8J  27  
W8J  H091  H10  H  0  0  N  N  N  -45.645  -28.566   1.591  -0.032  -1.175  -1.743  H091  W8J  28  
W8J  H112  H11  H  0  0  N  N  N  -44.164  -30.109   0.324   2.389  -1.552  -1.255  H112  W8J  29  
W8J  H111  H12  H  0  0  N  N  N  -45.351  -31.143  -0.541   2.739   0.139  -1.685  H111  W8J  30  
W8J  H121  H13  H  0  0  N  N  N  -44.382  -33.138   0.203   3.275  -1.111   1.060  H121  W8J  31  
W8J  H161  H14  H  0  0  N  N  N  -42.141  -33.093  -0.348   5.040  -0.568  -1.397  H161  W8J  32  
W8J  H162  H15  H  0  0  N  N  N  -42.583  -31.438  -0.888   5.087  -1.971  -0.276  H162  W8J  33  
W8J  H012  H16  H  0  0  N  N  N  -49.673  -28.557   6.488  -5.429   0.978   1.163  H012  W8J  34  
W8J  H011  H17  H  0  0  N  N  N  -48.695  -29.509   7.384  -5.002   2.540   0.715  H011  W8J  35  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
W8J  C16  C12   SING  N  N   1  
W8J  C16  C15   SING  N  N   2  
W8J  C11  C12   SING  N  N   3  
W8J  C11  C10   SING  N  N   4  
W8J  C12  C13   SING  N  N   5  
W8J  C15  O14   SING  N  N   6  
W8J  C10  C09   SING  N  N   7  
W8J  C13  O14   SING  N  N   8  
W8J  C09  N08   SING  N  N   9  
W8J  C17  N08   SING  Y  N  10  
W8J  C17  N18   DOUB  Y  N  11  
W8J  N08  C07   SING  Y  N  12  
W8J  N18  C02   SING  Y  N  13  
W8J  C07  N06   DOUB  Y  N  14  
W8J  C07  C03   SING  Y  N  15  
W8J  N06  C05   SING  Y  N  16  
W8J  C02  C03   DOUB  Y  N  17  
W8J  C02  N01   SING  N  N  18  
W8J  C03  N04   SING  Y  N  19  
W8J  C05  N04   DOUB  Y  N  20  
W8J  C10  H101  SING  N  N  21  
W8J  C10  H102  SING  N  N  22  
W8J  C13  H132  SING  N  N  23  
W8J  C13  H131  SING  N  N  24  
W8J  C15  H151  SING  N  N  25  
W8J  C15  H152  SING  N  N  26  
W8J  C17  H171  SING  N  N  27  
W8J  C05  H051  SING  N  N  28  
W8J  C09  H092  SING  N  N  29  
W8J  C09  H091  SING  N  N  30  
W8J  C11  H112  SING  N  N  31  
W8J  C11  H111  SING  N  N  32  
W8J  C12  H121  SING  N  N  33  
W8J  C16  H161  SING  N  N  34  
W8J  C16  H162  SING  N  N  35  
W8J  N01  H012  SING  N  N  36  
W8J  N01  H011  SING  N  N  37  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
W8J  SMILES            ACDLabs               12.01  "C(CN2C=NC(=C1N=CN=C12)N)CC3COCC3"  
W8J  InChI             InChI                 1.03   "InChI=1S/C12H17N5O/c13-11-10-12(15-7-14-10)17(8-16-11)4-1-2-9-3-5-18-6-9/h7-9H,1-6,13H2/t9-/m0/s1"  
W8J  InChIKey          InChI                 1.03   GTHFXQJDSWIMIA-VIFPVBQESA-N  
W8J  SMILES_CANONICAL  CACTVS                3.385  "Nc1ncn(CCC[C@H]2CCOC2)c3ncnc13"  
W8J  SMILES            CACTVS                3.385  "Nc1ncn(CCC[CH]2CCOC2)c3ncnc13"  
W8J  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "c1nc-2c(ncn(c2n1)CCC[C@H]3CCOC3)N"  
W8J  SMILES            "OpenEye OEToolkits"  2.0.7  "c1nc-2c(ncn(c2n1)CCCC3CCOC3)N"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
W8J  "SYSTEMATIC NAME"  ACDLabs               12.01  "3-{3-[(3S)-oxolan-3-yl]propyl}-3H-purin-6-amine"  
W8J  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "3-[3-[(3~{S})-oxolan-3-yl]propyl]purin-6-amine"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
W8J  "Create component"  2020-09-29  RCSB  
W8J  "Initial release"   2020-12-16  RCSB  
##
