data_S5J
#

_chem_comp.id                                   S5J
_chem_comp.name                                 "2-[4-(2-methoxyphenyl)piperazin-1-yl]ethanenitrile"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C13 H17 N3 O"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2020-03-04
_chem_comp.pdbx_modified_date                   2020-04-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       231.294
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    S5J
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       5RAQ
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
S5J  N1   N1   N  0  1  N  N  N  -20.173  92.775  141.224   2.678   0.051   0.452  N1   S5J   1  
S5J  C4   C1   C  0  1  Y  N  N  -16.207  92.925  136.032  -2.889  -2.310   0.075  C4   S5J   2  
S5J  C5   C2   C  0  1  Y  N  N  -17.142  92.826  137.059  -1.617  -1.774   0.153  C5   S5J   3  
S5J  C6   C3   C  0  1  Y  N  N  -16.994  93.562  138.266  -1.436  -0.403   0.048  C6   S5J   4  
S5J  C7   C4   C  0  1  N  N  N  -18.813  94.410  139.872   0.446  -0.099   1.448  C7   S5J   5  
S5J  C8   C5   C  0  1  N  N  N  -19.365  94.091  141.303   1.816   0.580   1.519  C8   S5J   6  
S5J  C10  C6   C  0  1  N  N  N  -18.664  91.991  139.362   0.712  -0.386  -0.941  C10  S5J   7  
S5J  N    N2   N  0  1  N  N  N  -18.018  93.312  139.289  -0.149   0.142   0.126  N    S5J   8  
S5J  C    C7   C  0  1  N  N  N  -14.715  96.059  139.760  -3.541   2.567  -0.425  C    S5J   9  
S5J  O    O1   O  0  1  N  N  N  -15.798  95.153  139.554  -2.366   1.776  -0.239  O    S5J  10  
S5J  C1   C8   C  0  1  Y  N  N  -15.863  94.421  138.384  -2.538   0.430  -0.135  C1   S5J  11  
S5J  C11  C9   C  0  1  N  N  N  -20.835  92.452  142.594   4.028   0.623   0.534  C11  S5J  12  
S5J  C12  C10  C  0  1  N  N  N  -19.829  91.956  143.533   4.923  -0.097  -0.386  C12  S5J  13  
S5J  C2   C11  C  0  1  Y  N  N  -14.920  94.498  137.335  -3.809  -0.115  -0.212  C2   S5J  14  
S5J  C3   C12  C  0  1  Y  N  N  -15.105  93.752  136.170  -3.982  -1.483  -0.106  C3   S5J  15  
S5J  C9   C13  C  0  1  N  N  N  -19.259  91.629  140.742   2.082   0.292  -0.870  C9   S5J  16  
S5J  N2   N3   N  0  1  N  N  N  -18.877  91.582  144.123   5.613  -0.654  -1.096  N2   S5J  17  
S5J  H2   H2   H  0  1  N  N  N  -16.342  92.355  135.125  -3.029  -3.378   0.152  H2   S5J  18  
S5J  H3   H3   H  0  1  N  N  N  -17.997  92.177  136.936  -0.766  -2.422   0.295  H3   S5J  19  
S5J  H4   H4   H  0  1  N  N  N  -18.176  95.305  139.936   0.563  -1.171   1.604  H4   S5J  20  
S5J  H5   H5   H  0  1  N  N  N  -19.666  94.613  139.207  -0.204   0.313   2.220  H5   S5J  21  
S5J  H6   H6   H  0  1  N  N  N  -18.529  93.973  142.008   2.272   0.378   2.488  H6   S5J  22  
S5J  H7   H7   H  0  1  N  N  N  -20.017  94.909  141.642   1.696   1.656   1.390  H7   S5J  23  
S5J  H8   H8   H  0  1  N  N  N  -19.478  91.968  138.623   0.832  -1.462  -0.812  H8   S5J  24  
S5J  H9   H9   H  0  1  N  N  N  -17.913  91.230  139.104   0.257  -0.185  -1.910  H9   S5J  25  
S5J  H10  H10  H  0  1  N  N  N  -14.828  96.550  140.738  -3.263   3.619  -0.492  H10  S5J  26  
S5J  H11  H11  H  0  1  N  N  N  -13.765  95.506  139.735  -4.041   2.264  -1.345  H11  S5J  27  
S5J  H12  H12  H  0  1  N  N  N  -14.718  96.820  138.966  -4.214   2.422   0.419  H12  S5J  28  
S5J  H13  H13  H  0  1  N  N  N  -21.294  93.365  143.001   3.993   1.677   0.256  H13  S5J  29  
S5J  H14  H14  H  0  1  N  N  N  -21.610  91.684  142.452   4.402   0.528   1.553  H14  S5J  30  
S5J  H15  H15  H  0  1  N  N  N  -14.054  95.136  137.435  -4.664   0.529  -0.354  H15  S5J  31  
S5J  H16  H16  H  0  1  N  N  N  -14.383  93.820  135.370  -4.974  -1.906  -0.167  H16  S5J  32  
S5J  H17  H17  H  0  1  N  N  N  -19.846  90.703  140.657   1.966   1.365  -1.026  H17  S5J  33  
S5J  H18  H18  H  0  1  N  N  N  -18.444  91.481  141.466   2.732  -0.119  -1.642  H18  S5J  34  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
S5J  C4   C3   DOUB  Y  N   1  
S5J  C4   C5   SING  Y  N   2  
S5J  C3   C2   SING  Y  N   3  
S5J  C5   C6   DOUB  Y  N   4  
S5J  C2   C1   DOUB  Y  N   5  
S5J  C6   C1   SING  Y  N   6  
S5J  C6   N    SING  N  N   7  
S5J  C1   O    SING  N  N   8  
S5J  N    C10  SING  N  N   9  
S5J  N    C7   SING  N  N  10  
S5J  C10  C9   SING  N  N  11  
S5J  O    C    SING  N  N  12  
S5J  C7   C8   SING  N  N  13  
S5J  C9   N1   SING  N  N  14  
S5J  N1   C8   SING  N  N  15  
S5J  N1   C11  SING  N  N  16  
S5J  C11  C12  SING  N  N  17  
S5J  C12  N2   TRIP  N  N  18  
S5J  C4   H2   SING  N  N  19  
S5J  C5   H3   SING  N  N  20  
S5J  C7   H4   SING  N  N  21  
S5J  C7   H5   SING  N  N  22  
S5J  C8   H6   SING  N  N  23  
S5J  C8   H7   SING  N  N  24  
S5J  C10  H8   SING  N  N  25  
S5J  C10  H9   SING  N  N  26  
S5J  C    H10  SING  N  N  27  
S5J  C    H11  SING  N  N  28  
S5J  C    H12  SING  N  N  29  
S5J  C11  H13  SING  N  N  30  
S5J  C11  H14  SING  N  N  31  
S5J  C2   H15  SING  N  N  32  
S5J  C3   H16  SING  N  N  33  
S5J  C9   H17  SING  N  N  34  
S5J  C9   H18  SING  N  N  35  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
S5J  InChI             InChI                 1.03   "InChI=1S/C13H17N3O/c1-17-13-5-3-2-4-12(13)16-10-8-15(7-6-14)9-11-16/h2-5H,7-11H2,1H3"  
S5J  InChIKey          InChI                 1.03   CMNAMTJQXKKSGP-UHFFFAOYSA-N  
S5J  SMILES_CANONICAL  CACTVS                3.385  "COc1ccccc1N2CCN(CC2)CC#N"  
S5J  SMILES            CACTVS                3.385  "COc1ccccc1N2CCN(CC2)CC#N"  
S5J  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.6  "COc1ccccc1N2CCN(CC2)CC#N"  
S5J  SMILES            "OpenEye OEToolkits"  2.0.6  "COc1ccccc1N2CCN(CC2)CC#N"  
#
_pdbx_chem_comp_identifier.comp_id          S5J
_pdbx_chem_comp_identifier.type             "SYSTEMATIC NAME"
_pdbx_chem_comp_identifier.program          "OpenEye OEToolkits"
_pdbx_chem_comp_identifier.program_version  2.0.6
_pdbx_chem_comp_identifier.identifier       "2-[4-(2-methoxyphenyl)piperazin-1-yl]ethanenitrile"
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
S5J  "Create component"               2020-03-04  RCSB  
S5J  "Modify model coordinates code"  2020-03-06  RCSB  
S5J  "Initial release"                2020-04-22  RCSB  
##
