data_P8J
#

_chem_comp.id                                   P8J
_chem_comp.name                                 "methyl 3-O-[(1-beta-D-galactopyranosyl-1H-1,2,3-triazol-4-yl)methyl]-beta-D-galactopyranoside"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C16 H27 N3 O11"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-08-06
_chem_comp.pdbx_modified_date                   2020-04-24
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       437.399
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    P8J
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6Q17
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
P8J  C2   C1   C  0  1  Y  N  N  -21.447  -10.465   2.402  -0.986   0.185  -0.449  C2   P8J   1  
P8J  C3   C2   C  0  1  N  N  N  -22.658  -12.720   2.325   1.175  -0.117  -1.785  C3   P8J   2  
P8J  C4   C3   C  0  1  N  N  N  -20.180   -5.497   0.302  -5.831  -2.237   1.523  C4   P8J   3  
P8J  C5   C4   C  0  1  N  N  R  -19.541   -6.515   1.234  -5.189  -0.860   1.340  C5   P8J   4  
P8J  C6   C5   C  0  1  N  N  R  -19.645   -8.747   2.013  -3.410   0.270   0.196  C6   P8J   5  
P8J  C7   C6   C  0  1  N  N  R  -18.188   -8.932   1.687  -4.379   1.294  -0.400  C7   P8J   6  
P8J  C10  C7   C  0  1  N  N  N  -21.498  -14.700  -2.242   5.868   2.312   1.316  C10  P8J   7  
P8J  C11  C8   C  0  1  N  N  R  -22.576  -13.694  -1.806   5.317   1.310   0.299  C11  P8J   8  
P8J  C12  C9   C  0  1  N  N  R  -24.747  -12.618  -2.074   5.337  -1.017  -0.279  C12  P8J   9  
P8J  C14  C10  C  0  1  N  N  S  -23.616  -12.604   0.142   3.243   0.291  -0.643  C14  P8J  10  
P8J  C16  C11  C  0  1  N  N  N  -25.973  -12.583  -4.152   7.295  -2.362   0.040  C16  P8J  11  
P8J  O11  O1   O  0  1  N  N  N  -26.047  -12.634  -2.725   5.871  -2.280   0.124  O11  P8J  12  
P8J  C13  C12  C  0  1  N  N  R  -24.953  -12.619  -0.564   3.807  -1.083  -0.268  C13  P8J  13  
P8J  O9   O2   O  0  1  N  N  N  -25.662  -11.442  -0.186   3.365  -2.056  -1.216  O9   P8J  14  
P8J  O8   O3   O  0  1  N  N  N  -23.883  -13.727  -2.484   5.775  -0.003   0.627  O8   P8J  15  
P8J  O7   O4   O  0  1  N  N  N  -21.153  -14.498  -3.611   7.292   2.371   1.203  O7   P8J  16  
P8J  C15  C13  C  0  1  N  N  S  -22.773  -13.789  -0.296   3.787   1.338   0.333  C15  P8J  17  
P8J  O10  O5   O  0  1  N  N  N  -23.446  -15.017   0.030   3.333   1.040   1.655  O10  P8J  18  
P8J  O6   O6   O  0  1  N  N  N  -23.855  -12.607   1.552   1.816   0.259  -0.564  O6   P8J  19  
P8J  C1   C14  C  0  1  Y  N  N  -21.537  -11.719   1.994  -0.319  -0.117  -1.588  C1   P8J  20  
P8J  N3   N1   N  0  1  Y  N  N  -20.469  -11.988   1.255  -1.247  -0.417  -2.503  N3   P8J  21  
P8J  N2   N2   N  0  1  Y  N  N  -19.781  -10.982   1.220  -2.411  -0.307  -1.968  N2   P8J  22  
P8J  N1   N3   N  0  1  Y  N  N  -20.281  -10.062   1.906  -2.301   0.047  -0.735  N1   P8J  23  
P8J  O2   O7   O  0  1  N  N  N  -20.213   -7.792   1.079  -4.099  -0.961   0.421  O2   P8J  24  
P8J  O1   O8   O  0  1  N  N  N  -21.555   -5.370   0.646  -4.895  -3.120   2.144  O1   P8J  25  
P8J  C9   C15  C  0  1  N  N  R  -18.040   -6.650   0.944  -6.230   0.119   0.789  C9   P8J  26  
P8J  O5   O9   O  0  1  N  N  N  -17.837   -7.130  -0.374  -6.750  -0.381  -0.444  O5   P8J  27  
P8J  C8   C16  C  0  1  N  N  S  -17.472   -7.641   1.913  -5.565   1.478   0.551  C8   P8J  28  
P8J  O4   O10  O  0  1  N  N  N  -16.076   -7.862   1.658  -6.511   2.377  -0.031  O4   P8J  29  
P8J  O3   O11  O  0  1  N  N  N  -17.629   -9.856   2.624  -3.707   2.544  -0.572  O3   P8J  30  
P8J  H1   H1   H  0  1  N  N  N  -22.152   -9.902   2.996  -0.555   0.474   0.498  H1   P8J  31  
P8J  H2   H2   H  0  1  N  N  N  -22.928  -12.584   3.383   1.438   0.595  -2.568  H2   P8J  32  
P8J  H3   H3   H  0  1  N  N  N  -22.257  -13.734   2.176   1.503  -1.115  -2.076  H3   P8J  33  
P8J  H4   H4   H  0  1  N  N  N  -20.088   -5.839  -0.740  -6.716  -2.144   2.153  H4   P8J  34  
P8J  H5   H5   H  0  1  N  N  N  -19.678   -4.525   0.415  -6.118  -2.637   0.551  H5   P8J  35  
P8J  H6   H6   H  0  1  N  N  N  -19.662   -6.163   2.269  -4.823  -0.499   2.300  H6   P8J  36  
P8J  H7   H7   H  0  1  N  N  N  -19.741   -8.369   3.042  -3.020   0.646   1.142  H7   P8J  37  
P8J  H8   H8   H  0  1  N  N  N  -18.062   -9.274   0.649  -4.738   0.937  -1.365  H8   P8J  38  
P8J  H9   H9   H  0  1  N  N  N  -21.883  -15.722  -2.112   5.447   3.298   1.120  H9   P8J  39  
P8J  H10  H10  H  0  1  N  N  N  -20.602  -14.564  -1.619   5.596   1.995   2.322  H10  P8J  40  
P8J  H11  H11  H  0  1  N  N  N  -22.150  -12.697  -1.994   5.663   1.578  -0.699  H11  P8J  41  
P8J  H12  H12  H  0  1  N  N  N  -24.242  -11.676  -2.336   5.684  -0.780  -1.285  H12  P8J  42  
P8J  H13  H13  H  0  1  N  N  N  -23.086  -11.681  -0.138   3.546   0.545  -1.659  H13  P8J  43  
P8J  H14  H14  H  0  1  N  N  N  -26.989  -12.599  -4.573   7.622  -3.351   0.363  H14  P8J  44  
P8J  H15  H15  H  0  1  N  N  N  -25.463  -11.658  -4.460   7.609  -2.195  -0.990  H15  P8J  45  
P8J  H16  H16  H  0  1  N  N  N  -25.410  -13.453  -4.521   7.741  -1.604   0.683  H16  P8J  46  
P8J  H17  H17  H  0  1  N  N  N  -25.512  -13.521  -0.273   3.462  -1.360   0.727  H17  P8J  47  
P8J  H18  H18  H  0  1  N  N  N  -25.792  -11.439   0.755   3.689  -2.950  -1.043  H18  P8J  48  
P8J  H19  H19  H  0  1  N  N  N  -20.487  -15.126  -3.866   7.710   2.987   1.819  H19  P8J  49  
P8J  H20  H20  H  0  1  N  N  N  -21.793  -13.743   0.201   3.434   2.328   0.041  H20  P8J  50  
P8J  H21  H21  H  0  1  N  N  N  -23.567  -15.072   0.971   3.644   1.661   2.327  H21  P8J  51  
P8J  H22  H22  H  0  1  N  N  N  -21.968   -4.736   0.071  -5.235  -4.013   2.292  H22  P8J  52  
P8J  H23  H23  H  0  1  N  N  N  -17.555   -5.673   1.085  -7.041   0.231   1.509  H23  P8J  53  
P8J  H24  H24  H  0  1  N  N  N  -16.905   -7.210  -0.543  -7.416   0.190  -0.851  H24  P8J  54  
P8J  H25  H25  H  0  1  N  N  N  -17.633   -7.295   2.945  -5.212   1.882   1.500  H25  P8J  55  
P8J  H26  H26  H  0  1  N  N  N  -15.736   -8.492   2.282  -6.155   3.257  -0.215  H26  P8J  56  
P8J  H27  H27  H  0  1  N  N  N  -18.050  -10.702   2.525  -4.264   3.242  -0.943  H27  P8J  57  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
P8J  C16  O11  SING  N  N   1  
P8J  O7   C10  SING  N  N   2  
P8J  O11  C12  SING  N  N   3  
P8J  O8   C12  SING  N  N   4  
P8J  O8   C11  SING  N  N   5  
P8J  C10  C11  SING  N  N   6  
P8J  C12  C13  SING  N  N   7  
P8J  C11  C15  SING  N  N   8  
P8J  C13  O9   SING  N  N   9  
P8J  C13  C14  SING  N  N  10  
P8J  O5   C9   SING  N  N  11  
P8J  C15  O10  SING  N  N  12  
P8J  C15  C14  SING  N  N  13  
P8J  C14  O6   SING  N  N  14  
P8J  C4   O1   SING  N  N  15  
P8J  C4   C5   SING  N  N  16  
P8J  C9   C5   SING  N  N  17  
P8J  C9   C8   SING  N  N  18  
P8J  O2   C5   SING  N  N  19  
P8J  O2   C6   SING  N  N  20  
P8J  N2   N3   DOUB  Y  N  21  
P8J  N2   N1   SING  Y  N  22  
P8J  N3   C1   SING  Y  N  23  
P8J  O6   C3   SING  N  N  24  
P8J  O4   C8   SING  N  N  25  
P8J  C7   C8   SING  N  N  26  
P8J  C7   C6   SING  N  N  27  
P8J  C7   O3   SING  N  N  28  
P8J  N1   C6   SING  N  N  29  
P8J  N1   C2   SING  Y  N  30  
P8J  C1   C3   SING  N  N  31  
P8J  C1   C2   DOUB  Y  N  32  
P8J  C2   H1   SING  N  N  33  
P8J  C3   H2   SING  N  N  34  
P8J  C3   H3   SING  N  N  35  
P8J  C4   H4   SING  N  N  36  
P8J  C4   H5   SING  N  N  37  
P8J  C5   H6   SING  N  N  38  
P8J  C6   H7   SING  N  N  39  
P8J  C7   H8   SING  N  N  40  
P8J  C10  H9   SING  N  N  41  
P8J  C10  H10  SING  N  N  42  
P8J  C11  H11  SING  N  N  43  
P8J  C12  H12  SING  N  N  44  
P8J  C14  H13  SING  N  N  45  
P8J  C16  H14  SING  N  N  46  
P8J  C16  H15  SING  N  N  47  
P8J  C16  H16  SING  N  N  48  
P8J  C13  H17  SING  N  N  49  
P8J  O9   H18  SING  N  N  50  
P8J  O7   H19  SING  N  N  51  
P8J  C15  H20  SING  N  N  52  
P8J  O10  H21  SING  N  N  53  
P8J  O1   H22  SING  N  N  54  
P8J  C9   H23  SING  N  N  55  
P8J  O5   H24  SING  N  N  56  
P8J  C8   H25  SING  N  N  57  
P8J  O4   H26  SING  N  N  58  
P8J  O3   H27  SING  N  N  59  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
P8J  SMILES            ACDLabs               12.01  "c2c(COC1C(C(OC)OC(CO)C1O)O)nnn2C3C(C(C(C(CO)O3)O)O)O"  
P8J  InChI             InChI                 1.03   "InChI=1S/C16H27N3O11/c1-27-16-13(26)14(10(23)8(4-21)30-16)28-5-6-2-19(18-17-6)15-12(25)11(24)9(22)7(3-20)29-15/h2,7-16,20-26H,3-5H2,1H3/t7-,8-,9+,10+,11+,12-,13-,14+,15-,16-/m1/s1"  
P8J  InChIKey          InChI                 1.03   KDTWYQHAYRRJMY-JEECUGMMSA-N  
P8J  SMILES_CANONICAL  CACTVS                3.385  "CO[C@@H]1O[C@H](CO)[C@H](O)[C@H](OCc2cn(nn2)[C@@H]3O[C@H](CO)[C@H](O)[C@H](O)[C@H]3O)[C@H]1O"  
P8J  SMILES            CACTVS                3.385  "CO[CH]1O[CH](CO)[CH](O)[CH](OCc2cn(nn2)[CH]3O[CH](CO)[CH](O)[CH](O)[CH]3O)[CH]1O"  
P8J  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "CO[C@H]1[C@@H]([C@H]([C@H]([C@H](O1)CO)O)OCc2cn(nn2)[C@H]3[C@@H]([C@H]([C@H]([C@H](O3)CO)O)O)O)O"  
P8J  SMILES            "OpenEye OEToolkits"  2.0.7  "COC1C(C(C(C(O1)CO)O)OCc2cn(nn2)C3C(C(C(C(O3)CO)O)O)O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
P8J  "SYSTEMATIC NAME"  ACDLabs               12.01  "methyl 3-O-[(1-beta-D-galactopyranosyl-1H-1,2,3-triazol-4-yl)methyl]-beta-D-galactopyranoside"  
P8J  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(2~{R},3~{R},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-6-[4-[[(2~{R},3~{S},4~{S},5~{R},6~{R})-2-(hydroxymethyl)-6-methoxy-3,5-bis(oxidanyl)oxan-4-yl]oxymethyl]-1,2,3-triazol-1-yl]oxane-3,4,5-triol"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
P8J  "Create component"  2019-08-06  RCSB  
P8J  "Initial release"   2020-04-29  RCSB  
##
