data_P6J
#

_chem_comp.id                                   P6J
_chem_comp.name                                 "N-{3-[(1S,5S,6S)-3-amino-1-(methoxymethyl)-5-methyl-2-thia-4-azabicyclo[4.1.0]hept-3-en-5-yl]-4,5-difluorophenyl}-5-[(prop-2-yn-1-yl)oxy]pyrazine-2-carboxamide"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C22 H21 F2 N5 O3 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-08-01
_chem_comp.pdbx_modified_date                   2019-10-18
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       473.496
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    P6J
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6PZ4
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
P6J  C13  C1   C  0  1  N  N  N  64.531  49.093  10.407    8.745  -0.764  -1.831  C13  P6J   1  
P6J  O1   O1   O  0  1  N  N  N  64.741  47.690  10.189    7.480  -1.186  -1.318  O1   P6J   2  
P6J  C12  C2   C  0  1  N  N  N  65.941  47.203  10.844    6.503  -0.145  -1.252  C12  P6J   3  
P6J  C9   C3   C  0  1  N  N  S  67.105  47.396   9.903    5.196  -0.708  -0.691  C9   P6J   4  
P6J  C8   C4   C  0  1  N  N  S  67.861  48.695  10.074    3.995   0.245  -0.531  C8   P6J   5  
P6J  C14  C5   C  0  1  N  N  N  68.528  47.359  10.458    3.991  -0.820  -1.628  C14  P6J   6  
P6J  S1   S1   S  0  1  N  N  N  66.932  46.724   8.228    5.341  -1.965   0.616  S1   P6J   7  
P6J  C10  C6   C  0  1  N  N  N  66.683  48.195   7.323    3.627  -2.364   0.781  C10  P6J   8  
P6J  N2   N1   N  0  1  N  N  N  65.865  48.207   6.287    3.230  -3.676   0.893  N2   P6J   9  
P6J  N1   N2   N  0  1  N  N  N  67.316  49.367   7.708    2.743  -1.407   0.797  N1   P6J  10  
P6J  C1   C7   C  0  1  N  N  S  68.316  49.436   8.806    3.111   0.001   0.695  C1   P6J  11  
P6J  C11  C8   C  0  1  N  N  N  68.424  50.945   9.098    3.873   0.414   1.956  C11  P6J  12  
P6J  C2   C9   C  0  1  Y  N  N  69.701  48.957   8.318    1.860   0.834   0.577  C2   P6J  13  
P6J  C3   C10  C  0  1  Y  N  N  69.909  48.444   7.038    0.621   0.222   0.584  C3   P6J  14  
P6J  C7   C11  C  0  1  Y  N  N  70.812  49.075   9.159    1.954   2.210   0.468  C7   P6J  15  
P6J  F1   F1   F  0  1  N  N  N  70.686  49.563  10.405    3.166   2.806   0.466  F1   P6J  16  
P6J  C6   C12  C  0  1  Y  N  N  72.063  48.670   8.733    0.804   2.978   0.359  C6   P6J  17  
P6J  F2   F2   F  0  1  N  N  N  73.102  48.791   9.594    0.897   4.322   0.251  F2   P6J  18  
P6J  C5   C13  C  0  1  Y  N  N  72.261  48.152   7.455   -0.438   2.369   0.359  C5   P6J  19  
P6J  C4   C14  C  0  1  Y  N  N  71.168  48.036   6.579   -0.532   0.988   0.476  C4   P6J  20  
P6J  N3   N3   N  0  1  N  N  N  71.259  47.485   5.353   -1.787   0.370   0.483  N3   P6J  21  
P6J  C15  C15  C  0  1  N  N  N  72.344  46.928   4.781   -2.797   0.888  -0.243  C15  P6J  22  
P6J  O2   O2   O  0  1  N  N  N  73.498  46.944   5.226   -2.595   1.834  -0.978  O2   P6J  23  
P6J  C16  C16  C  0  1  Y  N  N  72.075  46.263   3.426   -4.153   0.305  -0.145  C16  P6J  24  
P6J  C19  C17  C  0  1  Y  N  N  72.994  45.382   2.867   -5.199   0.840  -0.896  C19  P6J  25  
P6J  N5   N4   N  0  1  Y  N  N  72.742  44.801   1.700   -6.409   0.318  -0.808  N5   P6J  26  
P6J  N4   N5   N  0  1  Y  N  N  70.932  46.508   2.772   -4.374  -0.736   0.656  N4   P6J  27  
P6J  C17  C18  C  0  1  Y  N  N  70.674  45.935   1.611   -5.580  -1.254   0.743  C17  P6J  28  
P6J  C18  C19  C  0  1  Y  N  N  71.590  45.060   1.045   -6.628  -0.715  -0.005  C18  P6J  29  
P6J  O3   O3   O  0  1  N  N  N  71.260  44.517  -0.156   -7.870  -1.250   0.085  O3   P6J  30  
P6J  C20  C20  C  0  1  N  N  N  72.236  43.686  -0.815   -8.895  -0.648  -0.708  C20  P6J  31  
P6J  C21  C21  C  0  1  N  N  N  73.343  44.501  -1.324  -10.167  -1.354  -0.484  C21  P6J  32  
P6J  C22  C22  C  0  1  N  N  N  74.205  45.159  -1.724  -11.181  -1.917  -0.305  C22  P6J  33  
P6J  H1   H1   H  0  1  N  N  N  63.613  49.411   9.892    9.431  -1.612  -1.849  H1   P6J  34  
P6J  H2   H2   H  0  1  N  N  N  64.432  49.286  11.485    8.617  -0.379  -2.842  H2   P6J  35  
P6J  H3   H3   H  0  1  N  N  N  65.388  49.658  10.011    9.153   0.020  -1.193  H3   P6J  36  
P6J  H4   H4   H  0  1  N  N  N  65.828  46.135  11.082    6.865   0.652  -0.602  H4   P6J  37  
P6J  H5   H5   H  0  1  N  N  N  66.114  47.769  11.771    6.328   0.252  -2.251  H5   P6J  38  
P6J  H6   H6   H  0  1  N  N  N  67.550  49.332  10.915    4.127   1.284  -0.832  H6   P6J  39  
P6J  H7   H7   H  0  1  N  N  N  68.702  47.112  11.516    4.122  -0.483  -2.657  H7   P6J  40  
P6J  H8   H8   H  0  1  N  N  N  69.349  46.956   9.847    3.330  -1.676  -1.496  H8   P6J  41  
P6J  H9   H9   H  0  1  N  N  N  65.705  49.057   5.786    2.289  -3.892   0.983  H9   P6J  42  
P6J  H10  H10  H  0  1  N  N  N  65.405  47.366   6.003    3.891  -4.386   0.881  H10  P6J  43  
P6J  H11  H11  H  0  1  N  N  N  69.149  51.111   9.908    4.773  -0.193   2.052  H11  P6J  44  
P6J  H12  H12  H  0  1  N  N  N  68.760  51.471   8.192    4.150   1.466   1.885  H12  P6J  45  
P6J  H13  H13  H  0  1  N  N  N  67.440  51.331   9.402    3.239   0.264   2.830  H13  P6J  46  
P6J  H14  H14  H  0  1  N  N  N  69.063  48.358   6.372    0.549  -0.852   0.673  H14  P6J  47  
P6J  H15  H15  H  0  1  N  N  N  73.246  47.842   7.140   -1.333   2.967   0.275  H15  P6J  48  
P6J  H16  H16  H  0  1  N  N  N  70.424  47.490   4.803   -1.930  -0.431   1.011  H16  P6J  49  
P6J  H17  H17  H  0  1  N  N  N  73.918  45.169   3.385   -5.020   1.681  -1.549  H17  P6J  50  
P6J  H18  H18  H  0  1  N  N  N  69.747  46.148   1.100   -5.760  -2.098   1.393  H18  P6J  51  
P6J  H19  H19  H  0  1  N  N  N  71.757  43.161  -1.655   -9.005   0.399  -0.426  H19  P6J  52  
P6J  H20  H20  H  0  1  N  N  N  72.628  42.950  -0.098   -8.624  -0.713  -1.762  H20  P6J  53  
P6J  H21  H21  H  0  1  N  N  N  74.996  45.762  -2.091  -12.089  -2.420  -0.145  H21  P6J  54  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
P6J  C22  C21  TRIP  N  N   1  
P6J  C21  C20  SING  N  N   2  
P6J  C20  O3   SING  N  N   3  
P6J  O3   C18  SING  N  N   4  
P6J  C18  C17  DOUB  Y  N   5  
P6J  C18  N5   SING  Y  N   6  
P6J  C17  N4   SING  Y  N   7  
P6J  N5   C19  DOUB  Y  N   8  
P6J  N4   C16  DOUB  Y  N   9  
P6J  C19  C16  SING  Y  N  10  
P6J  C16  C15  SING  N  N  11  
P6J  C15  O2   DOUB  N  N  12  
P6J  C15  N3   SING  N  N  13  
P6J  N3   C4   SING  N  N  14  
P6J  N2   C10  SING  N  N  15  
P6J  C4   C3   DOUB  Y  N  16  
P6J  C4   C5   SING  Y  N  17  
P6J  C3   C2   SING  Y  N  18  
P6J  C10  N1   DOUB  N  N  19  
P6J  C10  S1   SING  N  N  20  
P6J  C5   C6   DOUB  Y  N  21  
P6J  N1   C1   SING  N  N  22  
P6J  S1   C9   SING  N  N  23  
P6J  C2   C1   SING  N  N  24  
P6J  C2   C7   DOUB  Y  N  25  
P6J  C6   C7   SING  Y  N  26  
P6J  C6   F2   SING  N  N  27  
P6J  C1   C11  SING  N  N  28  
P6J  C1   C8   SING  N  N  29  
P6J  C7   F1   SING  N  N  30  
P6J  C9   C8   SING  N  N  31  
P6J  C9   C14  SING  N  N  32  
P6J  C9   C12  SING  N  N  33  
P6J  C8   C14  SING  N  N  34  
P6J  O1   C13  SING  N  N  35  
P6J  O1   C12  SING  N  N  36  
P6J  C13  H1   SING  N  N  37  
P6J  C13  H2   SING  N  N  38  
P6J  C13  H3   SING  N  N  39  
P6J  C12  H4   SING  N  N  40  
P6J  C12  H5   SING  N  N  41  
P6J  C8   H6   SING  N  N  42  
P6J  C14  H7   SING  N  N  43  
P6J  C14  H8   SING  N  N  44  
P6J  N2   H9   SING  N  N  45  
P6J  N2   H10  SING  N  N  46  
P6J  C11  H11  SING  N  N  47  
P6J  C11  H12  SING  N  N  48  
P6J  C11  H13  SING  N  N  49  
P6J  C3   H14  SING  N  N  50  
P6J  C5   H15  SING  N  N  51  
P6J  N3   H16  SING  N  N  52  
P6J  C19  H17  SING  N  N  53  
P6J  C17  H18  SING  N  N  54  
P6J  C20  H19  SING  N  N  55  
P6J  C20  H20  SING  N  N  56  
P6J  C22  H21  SING  N  N  57  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
P6J  SMILES            ACDLabs               12.01  "COCC12C(C1)C(N=C(S2)N)(C)c3c(F)c(F)cc(c3)NC(=O)c4cnc(cn4)OCC#C"  
P6J  InChI             InChI                 1.03   "InChI=1S/C22H21F2N5O3S/c1-4-5-32-17-10-26-15(9-27-17)19(30)28-12-6-13(18(24)14(23)7-12)21(2)16-8-22(16,11-31-3)33-20(25)29-21/h1,6-7,9-10,16H,5,8,11H2,2-3H3,(H2,25,29)(H,28,30)/t16-,21+,22+/m0/s1"  
P6J  InChIKey          InChI                 1.03   IPUJINDWAGRAHN-KNXBSLHKSA-N  
P6J  SMILES_CANONICAL  CACTVS                3.385  "COC[C@]12C[C@H]1[C@](C)(N=C(N)S2)c3cc(NC(=O)c4cnc(OCC#C)cn4)cc(F)c3F"  
P6J  SMILES            CACTVS                3.385  "COC[C]12C[CH]1[C](C)(N=C(N)S2)c3cc(NC(=O)c4cnc(OCC#C)cn4)cc(F)c3F"  
P6J  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C[C@]1([C@@H]2C[C@@]2(SC(=N1)N)COC)c3cc(cc(c3F)F)NC(=O)c4cnc(cn4)OCC#C"  
P6J  SMILES            "OpenEye OEToolkits"  2.0.7  "CC1(C2CC2(SC(=N1)N)COC)c3cc(cc(c3F)F)NC(=O)c4cnc(cn4)OCC#C"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
P6J  "SYSTEMATIC NAME"  ACDLabs               12.01  "N-{3-[(1S,5S,6S)-3-amino-1-(methoxymethyl)-5-methyl-2-thia-4-azabicyclo[4.1.0]hept-3-en-5-yl]-4,5-difluorophenyl}-5-[(prop-2-yn-1-yl)oxy]pyrazine-2-carboxamide"  
P6J  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "~{N}-[3-[(1~{S},5~{S},6~{S})-3-azanyl-1-(methoxymethyl)-5-methyl-2-thia-4-azabicyclo[4.1.0]hept-3-en-5-yl]-4,5-bis(fluoranyl)phenyl]-5-prop-2-ynoxy-pyrazine-2-carboxamide"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
P6J  "Create component"  2019-08-01  RCSB  
P6J  "Initial release"   2019-10-23  RCSB  
##
