data_P5J
#

_chem_comp.id                                   P5J
_chem_comp.name                                 "(3S)-3-benzyl-3-methyl-5-[5-(2-methylpyrimidin-5-yl)pyrazolo[1,5-a]pyrimidin-3-yl]-1,3-dihydro-2H-indol-2-one"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C27 H22 N6 O"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        ?
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-07-31
_chem_comp.pdbx_modified_date                   2019-08-23
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       446.503
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    P5J
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6PYR
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
P5J  C1   C1   C  0  1  Y  N  N  34.221  13.269  32.126   4.349   0.637   0.428  C1   P5J   1  
P5J  C2   C2   C  0  1  Y  N  N  33.439  14.425  31.847   5.006   1.797   0.896  C2   P5J   2  
P5J  C3   C3   C  0  1  Y  N  N  33.899  15.640  32.211   4.342   2.975   0.911  C3   P5J   3  
P5J  C5   C4   C  0  1  Y  N  N  35.839  14.604  33.130   2.439   1.872   0.027  C5   P5J   4  
P5J  C7   C5   C  0  1  Y  N  N  37.014  15.026  33.790   1.135   2.226  -0.347  C7   P5J   5  
P5J  C8   C6   C  0  1  Y  N  N  36.911  16.424  33.900   0.995   3.597  -0.111  C8   P5J   6  
P5J  C11  C7   C  0  1  Y  N  N  37.938  12.796  34.568   0.399   0.472  -1.960  C11  P5J   7  
P5J  C12  C8   C  0  1  Y  N  N  38.937  12.024  35.134  -0.563  -0.373  -2.467  C12  P5J   8  
P5J  C15  C9   C  0  1  Y  N  N  39.313  14.768  34.825  -1.183   1.302  -0.340  C15  P5J   9  
P5J  C16  C10  C  0  1  N  N  S  41.682  14.310  35.945  -3.587   0.212  -0.502  C16  P5J  10  
P5J  C17  C11  C  0  1  N  N  N  42.202  12.967  36.426  -4.029  -0.854  -1.480  C17  P5J  11  
P5J  C21  C12  C  0  1  Y  N  N  43.124  14.073  33.803  -5.147  -0.626   1.234  C21  P5J  12  
P5J  C23  C13  C  0  1  Y  N  N  44.755  12.492  32.960  -6.952  -2.199   1.261  C23  P5J  13  
P5J  C24  C14  C  0  1  Y  N  N  44.092  12.443  31.739  -7.789  -1.230   1.781  C24  P5J  14  
P5J  C27  C15  C  0  1  N  N  N  41.522  15.266  37.134  -4.413   1.487  -0.688  C27  P5J  15  
P5J  C31  C16  C  0  1  Y  N  N  32.984   9.441  30.872   6.359  -3.003   0.344  C31  P5J  16  
P5J  C33  C17  C  0  1  Y  N  N  34.715  10.891  31.398   4.434  -1.818  -0.066  C33  P5J  17  
P5J  C34  C18  C  0  1  N  N  N  32.499   8.085  30.417   7.089  -4.321   0.308  C34  P5J  18  
P5J  N4   N1   N  0  1  Y  N  N  35.100  15.724  32.861   3.047   3.017   0.474  N4   P5J  19  
P5J  N6   N2   N  0  1  Y  N  N  35.382  13.403  32.749   3.096   0.710   0.012  N6   P5J  20  
P5J  N9   N3   N  0  1  Y  N  N  35.789  16.835  33.359   2.121   4.062   0.373  N9   P5J  21  
P5J  C10  C19  C  0  1  Y  N  N  38.112  14.183  34.364   0.100   1.318  -0.892  C10  P5J  22  
P5J  C13  C20  C  0  1  Y  N  N  40.134  12.611  35.554  -1.847  -0.386  -1.921  C13  P5J  23  
P5J  C14  C21  C  0  1  Y  N  N  40.309  13.983  35.384  -2.140   0.464  -0.860  C14  P5J  24  
P5J  O18  O1   O  0  1  N  N  N  43.278  12.754  36.942  -5.131  -1.355  -1.551  O18  P5J  25  
P5J  N19  N4   N  0  1  N  N  N  41.262  12.048  36.154  -2.971  -1.141  -2.258  N19  P5J  26  
P5J  C20  C22  C  0  1  N  N  N  42.600  14.979  34.899  -3.707  -0.297   0.936  C20  P5J  27  
P5J  C22  C23  C  0  1  Y  N  N  44.276  13.312  33.981  -5.631  -1.897   0.988  C22  P5J  28  
P5J  C25  C24  C  0  1  Y  N  N  42.947  13.211  31.554  -7.303   0.039   2.036  C25  P5J  29  
P5J  C26  C25  C  0  1  Y  N  N  42.472  14.025  32.579  -5.984   0.342   1.758  C26  P5J  30  
P5J  C28  C26  C  0  1  Y  N  N  33.776  11.904  31.699   5.064  -0.659   0.399  C28  P5J  31  
P5J  C29  C27  C  0  1  Y  N  N  32.419  11.578  31.540   6.390  -0.759   0.834  C29  P5J  32  
P5J  N30  N5   N  0  1  Y  N  N  32.074  10.355  31.143   6.991  -1.935   0.789  N30  P5J  33  
P5J  N32  N6   N  0  1  Y  N  N  34.283   9.696  30.994   5.110  -2.954  -0.075  N32  P5J  34  
P5J  H1   H1   H  0  1  N  N  N  32.486  14.330  31.348   6.030   1.743   1.237  H1   P5J  35  
P5J  H2   H2   H  0  1  N  N  N  33.329  16.531  31.993   4.828   3.872   1.266  H2   P5J  36  
P5J  H3   H3   H  0  1  N  N  N  37.647  17.065  34.362   0.104   4.178  -0.296  H3   P5J  37  
P5J  H4   H4   H  0  1  N  N  N  37.008  12.330  34.277   1.390   0.476  -2.389  H4   P5J  38  
P5J  H5   H5   H  0  1  N  N  N  38.791  10.960  35.252  -0.324  -1.028  -3.291  H5   P5J  39  
P5J  H6   H6   H  0  1  N  N  N  39.456  15.835  34.741  -1.426   1.956   0.484  H6   P5J  40  
P5J  H7   H7   H  0  1  N  N  N  45.641  11.895  33.118  -7.330  -3.193   1.069  H7   P5J  41  
P5J  H8   H8   H  0  1  N  N  N  44.462  11.815  30.942  -8.821  -1.466   1.994  H8   P5J  42  
P5J  H9   H9   H  0  1  N  N  N  40.870  14.805  37.891  -5.463   1.271  -0.493  H9   P5J  43  
P5J  H10  H10  H  0  1  N  N  N  42.509  15.470  37.576  -4.064   2.251   0.007  H10  P5J  44  
P5J  H11  H11  H  0  1  N  N  N  41.073  16.209  36.788  -4.300   1.847  -1.711  H11  P5J  45  
P5J  H12  H12  H  0  1  N  N  N  35.773  11.083  31.494   3.411  -1.785  -0.411  H12  P5J  46  
P5J  H13  H13  H  0  1  N  N  N  33.363   7.430  30.230   7.593  -4.430  -0.653  H13  P5J  47  
P5J  H14  H14  H  0  1  N  N  N  31.865   7.641  31.199   7.826  -4.350   1.110  H14  P5J  48  
P5J  H15  H15  H  0  1  N  N  N  31.916   8.196  29.491   6.377  -5.135   0.439  H15  P5J  49  
P5J  H16  H16  H  0  1  N  N  N  41.358  11.074  36.357  -2.988  -1.798  -2.971  H16  P5J  50  
P5J  H17  H17  H  0  1  N  N  N  43.466  15.400  35.431  -3.098  -1.192   1.057  H17  P5J  51  
P5J  H18  H18  H  0  1  N  N  N  42.032  15.791  34.422  -3.361   0.474   1.625  H18  P5J  52  
P5J  H19  H19  H  0  1  N  N  N  44.805  13.357  34.921  -4.977  -2.655   0.583  H19  P5J  53  
P5J  H20  H20  H  0  1  N  N  N  42.424  13.176  30.610  -7.957   0.796   2.442  H20  P5J  54  
P5J  H21  H21  H  0  1  N  N  N  41.588  14.625  32.420  -5.606   1.336   1.950  H21  P5J  55  
P5J  H22  H22  H  0  1  N  N  N  31.658  12.318  31.739   6.914   0.112   1.199  H22  P5J  56  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
P5J  C34  C31  SING  N  N   1  
P5J  C31  N32  DOUB  Y  N   2  
P5J  C31  N30  SING  Y  N   3  
P5J  N32  C33  SING  Y  N   4  
P5J  N30  C29  DOUB  Y  N   5  
P5J  C33  C28  DOUB  Y  N   6  
P5J  C29  C28  SING  Y  N   7  
P5J  C25  C24  DOUB  Y  N   8  
P5J  C25  C26  SING  Y  N   9  
P5J  C28  C1   SING  N  N  10  
P5J  C24  C23  SING  Y  N  11  
P5J  C2   C1   SING  Y  N  12  
P5J  C2   C3   DOUB  Y  N  13  
P5J  C1   N6   DOUB  Y  N  14  
P5J  C3   N4   SING  Y  N  15  
P5J  C26  C21  DOUB  Y  N  16  
P5J  N6   C5   SING  Y  N  17  
P5J  N4   C5   SING  Y  N  18  
P5J  N4   N9   SING  Y  N  19  
P5J  C23  C22  DOUB  Y  N  20  
P5J  C5   C7   DOUB  Y  N  21  
P5J  N9   C8   DOUB  Y  N  22  
P5J  C7   C8   SING  Y  N  23  
P5J  C7   C10  SING  N  N  24  
P5J  C21  C22  SING  Y  N  25  
P5J  C21  C20  SING  N  N  26  
P5J  C10  C11  DOUB  Y  N  27  
P5J  C10  C15  SING  Y  N  28  
P5J  C11  C12  SING  Y  N  29  
P5J  C15  C14  DOUB  Y  N  30  
P5J  C20  C16  SING  N  N  31  
P5J  C12  C13  DOUB  Y  N  32  
P5J  C14  C13  SING  Y  N  33  
P5J  C14  C16  SING  N  N  34  
P5J  C13  N19  SING  N  N  35  
P5J  C16  C17  SING  N  N  36  
P5J  C16  C27  SING  N  N  37  
P5J  N19  C17  SING  N  N  38  
P5J  C17  O18  DOUB  N  N  39  
P5J  C2   H1   SING  N  N  40  
P5J  C3   H2   SING  N  N  41  
P5J  C8   H3   SING  N  N  42  
P5J  C11  H4   SING  N  N  43  
P5J  C12  H5   SING  N  N  44  
P5J  C15  H6   SING  N  N  45  
P5J  C23  H7   SING  N  N  46  
P5J  C24  H8   SING  N  N  47  
P5J  C27  H9   SING  N  N  48  
P5J  C27  H10  SING  N  N  49  
P5J  C27  H11  SING  N  N  50  
P5J  C33  H12  SING  N  N  51  
P5J  C34  H13  SING  N  N  52  
P5J  C34  H14  SING  N  N  53  
P5J  C34  H15  SING  N  N  54  
P5J  N19  H16  SING  N  N  55  
P5J  C20  H17  SING  N  N  56  
P5J  C20  H18  SING  N  N  57  
P5J  C22  H19  SING  N  N  58  
P5J  C25  H20  SING  N  N  59  
P5J  C26  H21  SING  N  N  60  
P5J  C29  H22  SING  N  N  61  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
P5J  SMILES            ACDLabs               12.01  "c1(nc2c(cnn2cc1)c3ccc4NC(C(C)(c4c3)Cc5ccccc5)=O)c6cnc(nc6)C"  
P5J  InChI             InChI                 1.03   "InChI=1S/C27H22N6O/c1-17-28-14-20(15-29-17)23-10-11-33-25(31-23)21(16-30-33)19-8-9-24-22(12-19)27(2,26(34)32-24)13-18-6-4-3-5-7-18/h3-12,14-16H,13H2,1-2H3,(H,32,34)/t27-/m0/s1"  
P5J  InChIKey          InChI                 1.03   KQGDDLRQLMABOG-MHZLTWQESA-N  
P5J  SMILES_CANONICAL  CACTVS                3.385  "Cc1ncc(cn1)c2ccn3ncc(c4ccc5NC(=O)[C@@](C)(Cc6ccccc6)c5c4)c3n2"  
P5J  SMILES            CACTVS                3.385  "Cc1ncc(cn1)c2ccn3ncc(c4ccc5NC(=O)[C](C)(Cc6ccccc6)c5c4)c3n2"  
P5J  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "Cc1ncc(cn1)c2ccn3c(n2)c(cn3)c4ccc5c(c4)[C@](C(=O)N5)(C)Cc6ccccc6"  
P5J  SMILES            "OpenEye OEToolkits"  2.0.7  "Cc1ncc(cn1)c2ccn3c(n2)c(cn3)c4ccc5c(c4)C(C(=O)N5)(C)Cc6ccccc6"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
P5J  "SYSTEMATIC NAME"  ACDLabs               12.01  "(3S)-3-benzyl-3-methyl-5-[5-(2-methylpyrimidin-5-yl)pyrazolo[1,5-a]pyrimidin-3-yl]-1,3-dihydro-2H-indol-2-one"  
P5J  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "(3~{S})-3-methyl-5-[5-(2-methylpyrimidin-5-yl)pyrazolo[1,5-a]pyrimidin-3-yl]-3-(phenylmethyl)-1~{H}-indol-2-one"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
P5J  "Create component"  2019-07-31  RCSB  
P5J  "Initial release"   2019-08-28  RCSB  
##
