data_MZJ
#

_chem_comp.id                                   MZJ
_chem_comp.name                                 "1-[4-({[6-amino-5-(4-phenoxyphenyl)pyrimidin-4-yl]amino}methyl)piperidin-1-yl]prop-2-en-1-one"
_chem_comp.type                                 NON-POLYMER
_chem_comp.pdbx_type                            HETAIN
_chem_comp.formula                              "C25 H27 N5 O2"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        Evobrutinib
_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2019-04-24
_chem_comp.pdbx_modified_date                   2020-06-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       429.514
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    MZJ
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       6OMU
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
MZJ  N1   N1   N  0  1  Y  N  N  20.053   5.636   0.792   1.156   4.259   0.298  N1   MZJ   1  
MZJ  N3   N2   N  0  1  Y  N  N  17.813   4.959   0.823   3.407   4.495   0.747  N3   MZJ   2  
MZJ  C4   C1   C  0  1  Y  N  N  17.702   5.122   2.155   3.635   3.202   0.536  C4   MZJ   3  
MZJ  C5   C2   C  0  1  Y  N  N  18.802   5.565   2.884   2.559   2.373   0.182  C5   MZJ   4  
MZJ  C6   C3   C  0  1  Y  N  N  20.045   5.844   2.124   1.288   2.956   0.067  C6   MZJ   5  
MZJ  C10  C4   C  0  1  N  N  N  23.211   7.706   2.344  -2.162   1.746  -0.786  C10  MZJ   6  
MZJ  C15  C5   C  0  1  N  N  N  22.428   9.012   2.547  -3.517   2.414  -1.028  C15  MZJ   7  
MZJ  C17  C6   C  0  1  Y  N  N  18.735   6.983   4.955   3.163   0.089   0.976  C17  MZJ   8  
MZJ  C20  C7   C  0  1  Y  N  N  18.209   4.753   6.533   2.734  -0.951  -1.562  C20  MZJ   9  
MZJ  C21  C8   C  0  1  Y  N  N  18.383   4.622   5.159   2.547   0.396  -1.337  C21  MZJ  10  
MZJ  C24  C9   C  0  1  Y  N  N  15.894   7.135   8.178   1.296  -3.497   0.452  C24  MZJ  11  
MZJ  C26  C10  C  0  1  Y  N  N  14.940   8.135  10.035   0.425  -5.722   0.612  C26  MZJ  12  
MZJ  C28  C11  C  0  1  Y  N  N  16.864   7.222  10.194   2.455  -5.323  -0.593  C28  MZJ  13  
MZJ  O30  O1   O  0  1  N  N  N  25.668  11.195   0.130  -6.746   0.524  -0.110  O30  MZJ  14  
MZJ  C29  C12  C  0  1  N  N  N  24.594  11.191   0.716  -5.722  -0.086   0.135  C29  MZJ  15  
MZJ  C31  C13  C  0  1  N  N  N  24.009  12.450   1.168  -5.749  -1.231   1.057  C31  MZJ  16  
MZJ  C32  C14  C  0  1  N  N  N  24.342  13.602   0.358  -6.908  -1.662   1.547  C32  MZJ  17  
MZJ  N13  N3   N  0  1  N  N  N  23.824  10.108   0.830  -4.561   0.289  -0.440  N13  MZJ  18  
MZJ  C12  C15  C  0  1  N  N  N  24.192   8.823   0.279  -3.297  -0.359  -0.065  C12  MZJ  19  
MZJ  C11  C16  C  0  1  N  N  N  24.415   7.858   1.420  -2.291   0.721   0.344  C11  MZJ  20  
MZJ  C14  C17  C  0  1  N  N  N  22.522  10.112   1.488  -4.537   1.353  -1.452  C14  MZJ  21  
MZJ  C9   C18  C  0  1  N  N  N  22.311   6.587   1.808  -1.132   2.807  -0.395  C9   MZJ  22  
MZJ  N8   N4   N  0  1  N  N  N  21.191   6.288   2.689   0.190   2.187  -0.279  N8   MZJ  23  
MZJ  N7   N5   N  0  1  N  N  N  16.521   4.879   2.763   4.912   2.682   0.663  N7   MZJ  24  
MZJ  C2   C19  C  0  1  Y  N  N  18.953   5.204   0.170   2.195   4.999   0.628  C2   MZJ  25  
MZJ  C16  C20  C  0  1  Y  N  N  18.656   5.733   4.366   2.760   0.925  -0.064  C16  MZJ  26  
MZJ  C19  C21  C  0  1  Y  N  N  18.275   6.007   7.115   3.130  -1.782  -0.522  C19  MZJ  27  
MZJ  C18  C22  C  0  1  Y  N  N  18.557   7.115   6.332   3.348  -1.258   0.745  C18  MZJ  28  
MZJ  O22  O2   O  0  1  N  N  N  18.102   6.147   8.473   3.313  -3.109  -0.747  O22  MZJ  29  
MZJ  C23  C23  C  0  1  Y  N  N  16.929   6.860   8.981   2.362  -3.970  -0.299  C23  MZJ  30  
MZJ  C27  C24  C  0  1  Y  N  N  15.926   7.822  10.658   1.487  -6.196  -0.137  C27  MZJ  31  
MZJ  C25  C25  C  0  1  Y  N  N  14.794   7.835   8.821   0.330  -4.375   0.906  C25  MZJ  32  
MZJ  H1   H1   H  0  1  N  N  N  23.585   7.388   3.328  -1.837   1.243  -1.697  H1   MZJ  33  
MZJ  H2   H2   H  0  1  N  N  N  22.773   9.449   3.496  -3.854   2.896  -0.110  H2   MZJ  34  
MZJ  H3   H3   H  0  1  N  N  N  21.366   8.739   2.634  -3.418   3.161  -1.816  H3   MZJ  35  
MZJ  H4   H4   H  0  1  N  N  N  18.934   7.855   4.349   3.333   0.497   1.962  H4   MZJ  36  
MZJ  H5   H5   H  0  1  N  N  N  18.023   3.881   7.142   2.573  -1.361  -2.548  H5   MZJ  37  
MZJ  H6   H6   H  0  1  N  N  N  18.305   3.647   4.702   2.239   1.042  -2.146  H6   MZJ  38  
MZJ  H7   H7   H  0  1  N  N  N  15.877   6.859   7.134   1.224  -2.446   0.686  H7   MZJ  39  
MZJ  H8   H8   H  0  1  N  N  N  14.159   8.689  10.535  -0.331  -6.406   0.968  H8   MZJ  40  
MZJ  H9   H9   H  0  1  N  N  N  17.691   6.981  10.846   3.284  -5.693  -1.179  H9   MZJ  41  
MZJ  H10  H10  H  0  1  N  N  N  23.376  12.516   2.040  -4.829  -1.722   1.337  H10  MZJ  42  
MZJ  H12  H12  H  0  1  N  N  N  23.953  14.575   0.618  -7.829  -1.172   1.267  H12  MZJ  43  
MZJ  H13  H13  H  0  1  N  N  N  24.979  13.488  -0.506  -6.929  -2.503   2.224  H13  MZJ  44  
MZJ  H15  H15  H  0  1  N  N  N  23.384   8.452  -0.368  -3.467  -1.036   0.772  H15  MZJ  45  
MZJ  H16  H16  H  0  1  N  N  N  25.116   8.922  -0.309  -2.907  -0.918  -0.916  H16  MZJ  46  
MZJ  H17  H17  H  0  1  N  N  N  24.654   6.871   0.997  -1.320   0.262   0.531  H17  MZJ  47  
MZJ  H18  H18  H  0  1  N  N  N  25.266   8.218   2.017  -2.640   1.219   1.248  H18  MZJ  48  
MZJ  H19  H19  H  0  1  N  N  N  22.368  11.088   1.971  -5.525   1.807  -1.530  H19  MZJ  49  
MZJ  H20  H20  H  0  1  N  N  N  21.739   9.949   0.733  -4.248   0.934  -2.416  H20  MZJ  50  
MZJ  H21  H21  H  0  1  N  N  N  21.915   6.894   0.829  -1.103   3.584  -1.159  H21  MZJ  51  
MZJ  H22  H22  H  0  1  N  N  N  22.917   5.676   1.689  -1.411   3.249   0.562  H22  MZJ  52  
MZJ  H23  H23  H  0  1  N  N  N  21.497   5.587   3.333   0.296   1.237  -0.445  H23  MZJ  53  
MZJ  H24  H24  H  0  1  N  N  N  15.848   4.591   2.082   5.650   3.262   0.908  H24  MZJ  54  
MZJ  H25  H25  H  0  1  N  N  N  16.639   4.155   3.442   5.069   1.738   0.507  H25  MZJ  55  
MZJ  H26  H26  H  0  1  N  N  N  18.986   5.047  -0.898   2.049   6.054   0.807  H26  MZJ  56  
MZJ  H27  H27  H  0  1  N  N  N  18.640   8.089   6.792   3.664  -1.905   1.549  H27  MZJ  57  
MZJ  H28  H28  H  0  1  N  N  N  15.971   8.098  11.701   1.558  -7.249  -0.365  H28  MZJ  58  
MZJ  H29  H29  H  0  1  N  N  N  13.893   8.086   8.282  -0.500  -4.007   1.491  H29  MZJ  59  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
MZJ  O30  C29  DOUB  N  N   1  
MZJ  C2   N1   DOUB  Y  N   2  
MZJ  C2   N3   SING  Y  N   3  
MZJ  C12  N13  SING  N  N   4  
MZJ  C12  C11  SING  N  N   5  
MZJ  C32  C31  DOUB  N  N   6  
MZJ  C29  N13  SING  N  N   7  
MZJ  C29  C31  SING  N  N   8  
MZJ  N1   C6   SING  Y  N   9  
MZJ  N3   C4   DOUB  Y  N  10  
MZJ  N13  C14  SING  N  N  11  
MZJ  C11  C10  SING  N  N  12  
MZJ  C14  C15  SING  N  N  13  
MZJ  C9   C10  SING  N  N  14  
MZJ  C9   N8   SING  N  N  15  
MZJ  C6   N8   SING  N  N  16  
MZJ  C6   C5   DOUB  Y  N  17  
MZJ  C4   N7   SING  N  N  18  
MZJ  C4   C5   SING  Y  N  19  
MZJ  C10  C15  SING  N  N  20  
MZJ  C5   C16  SING  N  N  21  
MZJ  C16  C17  DOUB  Y  N  22  
MZJ  C16  C21  SING  Y  N  23  
MZJ  C17  C18  SING  Y  N  24  
MZJ  C21  C20  DOUB  Y  N  25  
MZJ  C18  C19  DOUB  Y  N  26  
MZJ  C20  C19  SING  Y  N  27  
MZJ  C19  O22  SING  N  N  28  
MZJ  C24  C25  DOUB  Y  N  29  
MZJ  C24  C23  SING  Y  N  30  
MZJ  O22  C23  SING  N  N  31  
MZJ  C25  C26  SING  Y  N  32  
MZJ  C23  C28  DOUB  Y  N  33  
MZJ  C26  C27  DOUB  Y  N  34  
MZJ  C28  C27  SING  Y  N  35  
MZJ  C10  H1   SING  N  N  36  
MZJ  C15  H2   SING  N  N  37  
MZJ  C15  H3   SING  N  N  38  
MZJ  C17  H4   SING  N  N  39  
MZJ  C20  H5   SING  N  N  40  
MZJ  C21  H6   SING  N  N  41  
MZJ  C24  H7   SING  N  N  42  
MZJ  C26  H8   SING  N  N  43  
MZJ  C28  H9   SING  N  N  44  
MZJ  C31  H10  SING  N  N  45  
MZJ  C32  H12  SING  N  N  46  
MZJ  C32  H13  SING  N  N  47  
MZJ  C12  H15  SING  N  N  48  
MZJ  C12  H16  SING  N  N  49  
MZJ  C11  H17  SING  N  N  50  
MZJ  C11  H18  SING  N  N  51  
MZJ  C14  H19  SING  N  N  52  
MZJ  C14  H20  SING  N  N  53  
MZJ  C9   H21  SING  N  N  54  
MZJ  C9   H22  SING  N  N  55  
MZJ  N8   H23  SING  N  N  56  
MZJ  N7   H24  SING  N  N  57  
MZJ  N7   H25  SING  N  N  58  
MZJ  C2   H26  SING  N  N  59  
MZJ  C18  H27  SING  N  N  60  
MZJ  C27  H28  SING  N  N  61  
MZJ  C25  H29  SING  N  N  62  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
MZJ  SMILES            ACDLabs               12.01  "n1c(c(c(nc1)N)c2ccc(cc2)Oc3ccccc3)NCC4CCN(C(=O)[C@H]=C)CC4"  
MZJ  InChI             InChI                 1.03   "InChI=1S/C25H27N5O2/c1-2-22(31)30-14-12-18(13-15-30)16-27-25-23(24(26)28-17-29-25)19-8-10-21(11-9-19)32-20-6-4-3-5-7-20/h2-11,17-18H,1,12-16H2,(H3,26,27,28,29)"  
MZJ  InChIKey          InChI                 1.03   QUIWHXQETADMGN-UHFFFAOYSA-N  
MZJ  SMILES_CANONICAL  CACTVS                3.385  "Nc1ncnc(NCC2CCN(CC2)C(=O)C=C)c1c3ccc(Oc4ccccc4)cc3"  
MZJ  SMILES            CACTVS                3.385  "Nc1ncnc(NCC2CCN(CC2)C(=O)C=C)c1c3ccc(Oc4ccccc4)cc3"  
MZJ  SMILES_CANONICAL  "OpenEye OEToolkits"  2.0.7  "C=CC(=O)N1CCC(CC1)CNc2c(c(ncn2)N)c3ccc(cc3)Oc4ccccc4"  
MZJ  SMILES            "OpenEye OEToolkits"  2.0.7  "C=CC(=O)N1CCC(CC1)CNc2c(c(ncn2)N)c3ccc(cc3)Oc4ccccc4"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
MZJ  "SYSTEMATIC NAME"  ACDLabs               12.01  "1-[4-({[6-amino-5-(4-phenoxyphenyl)pyrimidin-4-yl]amino}methyl)piperidin-1-yl]prop-2-en-1-one"  
MZJ  "SYSTEMATIC NAME"  "OpenEye OEToolkits"  2.0.7  "1-[4-[[[6-azanyl-5-(4-phenoxyphenyl)pyrimidin-4-yl]amino]methyl]piperidin-1-yl]prop-2-en-1-one"  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
MZJ  "Create component"  2019-04-24  RCSB  
MZJ  "Modify synonyms"   2019-04-25  RCSB  
MZJ  "Initial release"   2019-08-14  RCSB  
MZJ  "Modify synonyms"   2020-06-05  PDBE  
#
_pdbx_chem_comp_synonyms.ordinal     1
_pdbx_chem_comp_synonyms.comp_id     MZJ
_pdbx_chem_comp_synonyms.name        Evobrutinib
_pdbx_chem_comp_synonyms.provenance  ?
_pdbx_chem_comp_synonyms.type        ?
##
