data_J0J
# 
_chem_comp.id                                    J0J 
_chem_comp.name                                  "D-alanyl-N-[(2S,6R)-6-amino-6-carboxy-1-{[(1R)-1-carboxyethyl]amino}-1-oxohexan-2-yl]-D-glutamine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C18 H31 N5 O9" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2013-05-21 
_chem_comp.pdbx_modified_date                    2013-07-12 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        461.467 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     J0J 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        4bol 
_chem_comp.pdbx_subcomponent_list                "DAL DGL API DAL" 
_chem_comp.pdbx_processing_site                  EBI 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
J0J N03  N03  N 0 1 N N N 22.291 -3.797 -13.793 -6.702 2.216  1.720  N    DAL 1  
J0J C02  C02  C 0 1 N N R 23.406 -3.332 -14.478 -6.040 1.788  0.480  CA   DAL 2  
J0J C01  C01  C 0 1 N N N 23.130 -2.158 -15.331 -7.024 1.895  -0.687 CB   DAL 3  
J0J C04  C04  C 0 1 N N N 24.262 -4.322 -15.235 -5.581 0.360  0.622  C    DAL 4  
J0J O05  O05  O 0 1 N N N 25.103 -4.781 -14.554 -6.077 -0.355 1.466  O    DAL 5  
J0J N06  N06  N 0 1 N N N 24.230 -4.694 -16.609 -4.620 -0.123 -0.190 N    DGL 6  
J0J C07  C07  C 0 1 N N R 25.229 -5.516 -17.218 -4.174 -1.512 -0.052 CA   DGL 7  
J0J C30  C30  C 0 1 N N N 24.897 -6.831 -17.896 -5.089 -2.414 -0.839 C    DGL 8  
J0J O31  O31  O 0 1 N N N 23.927 -7.059 -18.562 -6.018 -1.944 -1.452 O    DGL 9  
J0J C08  C08  C 0 1 N N N 25.779 -4.580 -18.278 -2.746 -1.644 -0.585 CB   DGL 10 
J0J C09  C09  C 0 1 N N N 27.158 -4.846 -18.691 -1.796 -0.825 0.292  CG   DGL 11 
J0J C10  C10  C 0 1 N N N 27.552 -4.032 -19.915 -0.389 -0.956 -0.232 CD   DGL 12 
J0J O11  O11  O 0 1 N N N 26.827 -3.586 -20.689 -0.168 -1.636 -1.211 OE1  DGL 13 
J0J O32  O32  O 0 1 N N N 25.675 -7.759 -17.837 -4.872 -3.738 -0.859 OXT  DGL 14 
J0J C22  C22  C 0 1 N N N 29.334 -4.000 -22.385 2.624  -1.687 0.441  C1   API 15 
J0J C13  C13  C 0 1 N N S 29.459 -3.157 -21.138 1.990  -0.442 -0.124 C2   API 16 
J0J C14  C14  C 0 1 N N N 30.935 -2.923 -20.903 2.807  0.781  0.297  C3   API 17 
J0J C15  C15  C 0 1 N N N 31.685 -4.225 -20.783 2.237  2.031  -0.378 C4   API 18 
J0J C16  C16  C 0 1 N N N 33.158 -3.949 -20.590 3.054  3.255  0.042  C5   API 19 
J0J C17  C17  C 0 1 N N R 34.018 -5.177 -20.796 2.484  4.504  -0.633 C6   API 20 
J0J C19  C19  C 0 1 N N N 33.795 -5.734 -22.183 3.361  5.689  -0.317 C7   API 21 
J0J O23  O23  O 0 1 N N N 29.021 -5.142 -22.339 1.995  -2.399 1.196  O1   API 22 
J0J O20  O20  O 0 1 N N N 34.106 -5.066 -23.171 3.037  6.466  0.549  O3   API 23 
J0J O21  O21  O 0 1 N N N 33.308 -6.854 -22.317 4.501  5.881  -0.999 O4   API 24 
J0J N12  N12  N 0 1 N N N 28.922 -3.848 -20.066 0.623  -0.315 0.386  N2   API 25 
J0J N18  N18  N 0 1 N N N 33.718 -6.122 -19.790 1.125  4.754  -0.134 N6   API 26 
J0J N24  N24  N 0 1 N N N 29.673 -3.371 -23.586 3.889  -2.010 0.108  N    DAL 27 
J0J C25  C25  C 0 1 N N R 29.678 -4.064 -24.828 4.505  -3.221 0.658  CA   DAL 28 
J0J C26  C26  C 0 1 N N N 31.104 -4.074 -25.302 5.102  -2.911 2.032  CB   DAL 29 
J0J C27  C27  C 0 1 N N N 28.799 -3.447 -25.899 5.596  -3.694 -0.268 C    DAL 30 
J0J O28  O28  O 0 1 N N N 29.167 -3.482 -27.084 5.834  -3.083 -1.283 O    DAL 31 
J0J O29  O29  O 0 1 N N N 27.739 -2.953 -25.578 6.302  -4.794 0.035  OXT  DAL 32 
J0J HN03 HN03 H 0 0 N N N 22.546 -4.588 -13.238 -7.504 1.637  1.919  H    DAL 33 
J0J HN0A HN0A H 0 0 N N N 21.939 -3.073 -13.200 -6.054 2.216  2.494  H2   DAL 34 
J0J H02  H02  H 0 1 N N N 24.079 -2.945 -13.699 -5.179 2.429  0.288  HA   DAL 35 
J0J H01  H01  H 0 1 N N N 22.598 -2.481 -16.238 -7.885 1.254  -0.495 HB1  DAL 36 
J0J H01A H01A H 0 0 N N N 24.079 -1.679 -15.613 -7.356 2.928  -0.789 HB2  DAL 37 
J0J H01B H01B H 0 0 N N N 22.507 -1.440 -14.777 -6.533 1.578  -1.607 HB3  DAL 38 
J0J HN06 HN06 H 0 0 N N N 23.474 -4.365 -17.174 -4.223 0.449  -0.865 H2   DGL 39 
J0J H07  H07  H 0 1 N N N 26.030 -5.706 -16.488 -4.197 -1.798 0.999  HA   DGL 40 
J0J H08  H08  H 0 1 N N N 25.136 -4.658 -19.167 -2.446 -2.692 -0.564 HB2  DGL 41 
J0J H08A H08A H 0 0 N N N 25.734 -3.555 -17.883 -2.704 -1.274 -1.609 HB3  DGL 42 
J0J H09  H09  H 0 1 N N N 27.833 -4.590 -17.861 -2.096 0.223  0.272  HG2  DGL 43 
J0J H09A H09A H 0 0 N N N 27.258 -5.915 -18.928 -1.837 -1.195 1.317  HG3  DGL 44 
J0J HO32 HO32 H 0 0 N N N 25.339 -8.488 -18.346 -5.485 -4.276 -1.378 HXT  DGL 45 
J0J H13  H13  H 0 1 N N N 28.952 -2.193 -21.291 1.967  -0.508 -1.212 H2   API 46 
J0J H14  H14  H 0 1 N N N 31.346 -2.350 -21.747 2.756  0.898  1.379  H31  API 47 
J0J H14A H14A H 0 0 N N N 31.063 -2.349 -19.973 3.845  0.646  -0.006 H32  API 48 
J0J H15  H15  H 0 1 N N N 31.303 -4.789 -19.919 2.288  1.914  -1.461 H41  API 49 
J0J H15A H15A H 0 0 N N N 31.541 -4.816 -21.700 1.199  2.166  -0.076 H42  API 50 
J0J H16  H16  H 0 1 N N N 33.468 -3.178 -21.311 3.003  3.371  1.125  H51  API 51 
J0J H16A H16A H 0 0 N N N 33.315 -3.578 -19.566 4.092  3.120  -0.260 H52  API 52 
J0J H17  H17  H 0 1 N N N 35.072 -4.875 -20.713 2.453  4.352  -1.712 H6   API 53 
J0J HO21 HO21 H 0 0 N N N 33.236 -7.060 -23.242 5.030  6.655  -0.762 HO4  API 54 
J0J HN12 HN12 H 0 0 N N N 29.540 -4.228 -19.377 0.445  0.229  1.169  HN22 API 55 
J0J HN18 HN18 H 0 0 N N N 34.282 -6.937 -19.919 0.503  4.002  -0.389 HN61 API 56 
J0J HN1A HN1A H 0 0 N N N 33.907 -5.724 -18.892 1.128  4.898  0.865  HN62 API 57 
J0J HN24 HN24 H 0 0 N N N 29.920 -2.402 -23.572 4.392  -1.441 -0.495 H2   DAL 58 
J0J H25  H25  H 0 1 N N N 29.355 -5.104 -24.672 3.749  -4.000 0.757  HA   DAL 59 
J0J H26  H26  H 0 1 N N N 31.456 -3.039 -25.426 5.560  -3.811 2.441  HB1  DAL 60 
J0J H26A H26A H 0 0 N N N 31.733 -4.589 -24.561 5.857  -2.131 1.933  HB2  DAL 61 
J0J H26B H26B H 0 0 N N N 31.167 -4.601 -26.265 4.312  -2.568 2.702  HB3  DAL 62 
J0J HO29 HO29 H 0 0 N N N 27.293 -2.629 -26.352 6.992  -5.059 -0.590 HXT  DAL 63 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
J0J H01B C01  SING N N 1  
J0J C01  H01A SING N N 2  
J0J C01  H01  SING N N 3  
J0J C01  C02  SING N N 4  
J0J C04  C02  SING N N 5  
J0J C02  N03  SING N N 6  
J0J C02  H02  SING N N 7  
J0J N03  HN03 SING N N 8  
J0J N03  HN0A SING N N 9  
J0J N06  C04  SING N N 10 
J0J C04  O05  DOUB N N 11 
J0J C07  N06  SING N N 12 
J0J HN06 N06  SING N N 13 
J0J C08  C07  SING N N 14 
J0J C30  C07  SING N N 15 
J0J C07  H07  SING N N 16 
J0J H08  C08  SING N N 17 
J0J C09  C08  SING N N 18 
J0J C08  H08A SING N N 19 
J0J C10  C09  SING N N 20 
J0J H09  C09  SING N N 21 
J0J C09  H09A SING N N 22 
J0J O11  C10  DOUB N N 23 
J0J N12  C10  SING N N 24 
J0J C13  N12  SING N N 25 
J0J N12  HN12 SING N N 26 
J0J C22  C13  SING N N 27 
J0J H13  C13  SING N N 28 
J0J C13  C14  SING N N 29 
J0J H14  C14  SING N N 30 
J0J C14  C15  SING N N 31 
J0J C14  H14A SING N N 32 
J0J H15  C15  SING N N 33 
J0J C15  C16  SING N N 34 
J0J C15  H15A SING N N 35 
J0J H16  C16  SING N N 36 
J0J C17  C16  SING N N 37 
J0J C16  H16A SING N N 38 
J0J C19  C17  SING N N 39 
J0J C17  H17  SING N N 40 
J0J C17  N18  SING N N 41 
J0J HN18 N18  SING N N 42 
J0J N18  HN1A SING N N 43 
J0J O20  C19  DOUB N N 44 
J0J O21  C19  SING N N 45 
J0J O21  HO21 SING N N 46 
J0J N24  C22  SING N N 47 
J0J C22  O23  DOUB N N 48 
J0J C25  N24  SING N N 49 
J0J N24  HN24 SING N N 50 
J0J C27  C25  SING N N 51 
J0J C26  C25  SING N N 52 
J0J C25  H25  SING N N 53 
J0J H26B C26  SING N N 54 
J0J H26  C26  SING N N 55 
J0J C26  H26A SING N N 56 
J0J O28  C27  DOUB N N 57 
J0J C27  O29  SING N N 58 
J0J O29  HO29 SING N N 59 
J0J O31  C30  DOUB N N 60 
J0J C30  O32  SING N N 61 
J0J O32  HO32 SING N N 62 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
J0J SMILES           ACDLabs              12.01 "O=C(NC(C(=O)O)CCC(=O)NC(C(=O)NC(C(=O)O)C)CCCC(C(=O)O)N)C(N)C" 
J0J InChI            InChI                1.03  
"InChI=1S/C18H31N5O9/c1-8(19)14(25)23-12(18(31)32)6-7-13(24)22-11(5-3-4-10(20)17(29)30)15(26)21-9(2)16(27)28/h8-12H,3-7,19-20H2,1-2H3,(H,21,26)(H,22,24)(H,23,25)(H,27,28)(H,29,30)(H,31,32)/t8-,9-,10-,11+,12-/m1/s1" 
J0J InChIKey         InChI                1.03  VFGFFQOPKZHQLZ-PZWNZHSQSA-N 
J0J SMILES_CANONICAL CACTVS               3.370 "C[C@@H](N)C(=O)N[C@H](CCC(=O)N[C@@H](CCC[C@@H](N)C(O)=O)C(=O)N[C@H](C)C(O)=O)C(O)=O" 
J0J SMILES           CACTVS               3.370 "C[CH](N)C(=O)N[CH](CCC(=O)N[CH](CCC[CH](N)C(O)=O)C(=O)N[CH](C)C(O)=O)C(O)=O" 
J0J SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@H](C(=O)N[C@H](CCC(=O)N[C@@H](CCC[C@H](C(=O)O)N)C(=O)N[C@H](C)C(=O)O)C(=O)O)N" 
J0J SMILES           "OpenEye OEToolkits" 1.7.6 "CC(C(=O)NC(CCC(=O)NC(CCCC(C(=O)O)N)C(=O)NC(C)C(=O)O)C(=O)O)N" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
J0J "SYSTEMATIC NAME" ACDLabs              12.01 "D-alanyl-N-[(2S,6R)-6-amino-6-carboxy-1-{[(1R)-1-carboxyethyl]amino}-1-oxohexan-2-yl]-D-glutamine"                                                                                            
J0J "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 "(2R,6S)-2-azanyl-6-[[(4R)-4-[[(2R)-2-azanylpropanoyl]amino]-5-oxidanyl-5-oxidanylidene-pentanoyl]amino]-7-oxidanylidene-7-[[(2R)-1-oxidanyl-1-oxidanylidene-propan-2-yl]amino]heptanoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
J0J "Create component"         2013-05-21 EBI  
J0J "Modify subcomponent list" 2013-05-22 EBI  
J0J "Initial release"          2013-07-17 RCSB 
# 
