data_H9J
# 
_chem_comp.id                                    H9J 
_chem_comp.name                                  "2,2,2-trifluoro-N-[(1R,2R,3R,4R,5R,6R)-2,3,5,6-tetrahydroxy-4-(hydroxymethyl)cyclohexyl]acetamide" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C9 H14 F3 N O6" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2018-06-18 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        289.206 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     H9J 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        6DTE 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
H9J C1  C1  C 0 1 N N R N N N 20.695 -8.651  3.600 -0.952 -1.485 0.109  C1  H9J 1  
H9J C2  C2  C 0 1 N N N N N N 20.088 -7.309  4.135 -0.070 -0.289 -0.256 C2  H9J 2  
H9J C3  C3  C 0 1 N N R N N N 19.595 -7.514  5.478 -0.616 0.971  0.417  C3  H9J 3  
H9J C4  C4  C 0 1 N N R N N N 18.662 -8.565  5.514 -2.046 1.227  -0.064 C4  H9J 4  
H9J C5  C5  C 0 1 N N N N N N 19.118 -9.769  4.974 -2.928 0.031  0.301  C5  H9J 5  
H9J C6  C6  C 0 1 N N N N N N 18.094 -10.870 5.016 -4.358 0.287  -0.179 C6  H9J 6  
H9J C7  C7  C 0 1 N N N N N N 20.496 -4.923  3.607 2.334  0.081  -0.402 C7  H9J 7  
H9J C8  C8  C 0 1 N N N N N N 21.539 -3.853  3.355 3.743  -0.170 0.072  C8  H9J 8  
H9J C9  C9  C 0 1 N N R N N N 19.609 -9.673  3.688 -2.382 -1.230 -0.372 C9  H9J 9  
H9J F81 F1  F 0 1 N N N N N N 21.621 -3.657  2.048 4.040  -1.532 -0.052 F81 H9J 10 
H9J F82 F2  F 0 1 N N N N N N 22.742 -4.196  3.799 4.636  0.574  -0.706 F82 H9J 11 
H9J F83 F3  F 0 1 N N N N N N 21.190 -2.711  3.937 3.859  0.213  1.412  F83 H9J 12 
H9J N2  N1  N 0 1 N N N N N N 20.894 -6.194  3.902 1.299  -0.534 0.204  N2  H9J 13 
H9J O3  O1  O 0 1 N N N N N N 19.024 -6.362  5.972 0.208  2.088  0.076  O3  H9J 14 
H9J O4  O2  O 0 1 N N N N N N 18.276 -8.724  6.865 -2.556 2.405  0.565  O4  H9J 15 
H9J O6  O3  O 0 1 N N N N N N 17.074 -10.685 3.997 -5.206 -0.775 0.262  O6  H9J 16 
H9J O7  O4  O 0 1 N N N N N N 19.332 -4.557  3.513 2.132  0.838  -1.328 O7  H9J 17 
H9J O9  O5  O 0 1 N N N N N N 18.632 -9.356  2.796 -2.383 -1.052 -1.789 O9  H9J 18 
H9J H1  H1  H 0 1 N N N N N N 20.995 -8.513  2.551 -0.562 -2.384 -0.370 H1  H9J 19 
H9J H2  H3  H 0 1 N N N N N N 19.189 -7.160  3.519 -0.071 -0.154 -1.337 H2  H9J 20 
H9J H3  H4  H 0 1 N N N N N N 20.450 -7.787  6.114 -0.615 0.836  1.498  H3  H9J 21 
H9J H4  H5  H 0 1 N N N N N N 17.775 -8.250  4.945 -2.047 1.363  -1.145 H4  H9J 22 
H9J H5  H6  H 0 1 N N N N N N 19.947 -10.111 5.611 -2.927 -0.105 1.383  H5  H9J 23 
H9J H62 H7  H 0 1 N N N N N N 17.614 -10.875 6.006 -4.716 1.232  0.230  H62 H9J 24 
H9J H61 H8  H 0 1 N N N N N N 18.597 -11.833 4.848 -4.372 0.334  -1.268 H61 H9J 25 
H9J H7  H9  H 0 1 N N N N N N 20.050 -10.641 3.406 -3.010 -2.082 -0.112 H7  H9J 26 
H9J HN2 H10 H 0 1 N N N N N N 21.881 -6.345  3.958 1.461  -1.139 0.945  HN2 H9J 27 
H9J HO3 H11 H 0 1 N N N N N N 18.707 -6.518  6.854 -0.080 2.924  0.469  HO3 H9J 28 
H9J HO4 H12 H 0 1 N N N N N N 17.971 -7.892  7.208 -2.045 3.204  0.377  HO4 H9J 29 
H9J HO6 H13 H 0 1 N N N N N N 16.443 -11.393 4.048 -6.130 -0.679 -0.007 HO6 H9J 30 
H9J H02 H14 H 0 1 N N N N N N 17.936 -10.001 2.845 -2.049 -1.814 -2.282 H02 H9J 31 
H9J O1  O6  O 0 1 N Y N N N N 21.771 -9.122  4.379 -0.950 -1.663 1.527  O1  H9J 32 
H9J H6  H15 H 0 1 N Y N N N N 22.484 -8.495  4.347 -1.490 -2.405 1.831  H6  H9J 33 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
H9J F81 C8  SING N N 1  
H9J O9  C9  SING N N 2  
H9J C8  C7  SING N N 3  
H9J C8  F82 SING N N 4  
H9J C8  F83 SING N N 5  
H9J O7  C7  DOUB N N 6  
H9J C1  C9  SING N N 7  
H9J C1  C2  SING N N 8  
H9J C7  N2  SING N N 9  
H9J C9  C5  SING N N 10 
H9J N2  C2  SING N N 11 
H9J O6  C6  SING N N 12 
H9J C2  C3  SING N N 13 
H9J C5  C6  SING N N 14 
H9J C5  C4  SING N N 15 
H9J C3  C4  SING N N 16 
H9J C3  O3  SING N N 17 
H9J C4  O4  SING N N 18 
H9J C1  H1  SING N N 19 
H9J C2  H2  SING N N 20 
H9J C3  H3  SING N N 21 
H9J C4  H4  SING N N 22 
H9J C5  H5  SING N N 23 
H9J C6  H62 SING N N 24 
H9J C6  H61 SING N N 25 
H9J C9  H7  SING N N 26 
H9J N2  HN2 SING N N 27 
H9J O3  HO3 SING N N 28 
H9J O4  HO4 SING N N 29 
H9J O6  HO6 SING N N 30 
H9J O9  H02 SING N N 31 
H9J C1  O1  SING N N 32 
H9J O1  H6  SING N N 33 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
H9J SMILES           ACDLabs              12.01 "C1(C(C(C(C(C1NC(C(F)(F)F)=O)O)O)CO)O)O"                                                                                    
H9J InChI            InChI                1.03  "InChI=1S/C9H14F3NO6/c10-9(11,12)8(19)13-3-6(17)4(15)2(1-14)5(16)7(3)18/h2-7,14-18H,1H2,(H,13,19)/t2-,3-,4-,5-,6-,7-/m1/s1" 
H9J InChIKey         InChI                1.03  RPAYCNWWSJECNN-ZGGPPPIHSA-N                                                                                                 
H9J SMILES_CANONICAL CACTVS               3.385 "OC[C@@H]1[C@@H](O)[C@H](O)[C@@H](NC(=O)C(F)(F)F)[C@@H](O)[C@@H]1O"                                                         
H9J SMILES           CACTVS               3.385 "OC[CH]1[CH](O)[CH](O)[CH](NC(=O)C(F)(F)F)[CH](O)[CH]1O"                                                                    
H9J SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "C(C1[C@H]([C@@H](C([C@H]([C@@H]1O)O)NC(=O)C(F)(F)F)O)O)O"                                                                  
H9J SMILES           "OpenEye OEToolkits" 2.0.6 "C(C1C(C(C(C(C1O)O)NC(=O)C(F)(F)F)O)O)O"                                                                                    
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
H9J "SYSTEMATIC NAME" ACDLabs              12.01 "2,2,2-trifluoro-N-[(1R,2R,3R,4R,5R,6R)-2,3,5,6-tetrahydroxy-4-(hydroxymethyl)cyclohexyl]acetamide"                       
H9J "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "2,2,2-tris(fluoranyl)-~{N}-[(2~{R},3~{R},5~{R},6~{R})-4-(hydroxymethyl)-2,3,5,6-tetrakis(oxidanyl)cyclohexyl]ethanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
H9J "Create component"   2018-06-18 RCSB 
H9J "Other modification" 2018-06-18 RCSB 
H9J "Initial release"    2019-04-24 RCSB 
H9J "Modify PCM"         2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            H9J 
_pdbx_chem_comp_pcm.modified_residue_id                ASP 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C1 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OD1 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
