data_E3J
# 
_chem_comp.id                                    E3J 
_chem_comp.name                                  "~{N}-(2-morpholin-4-ylethyl)-2-sulfanyl-benzamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H18 N2 O2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-12-23 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        266.359 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     E3J 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7QL7 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
E3J C10 C1  C 0 1 N N N N N N 10.735 -33.934 16.434 -5.129 -1.280 -0.648 C10 E3J 1  
E3J C13 C2  C 0 1 Y N N N N N 6.945  -39.287 12.536 2.760  1.778  -0.169 C13 E3J 2  
E3J C15 C3  C 0 1 Y N N N N N 6.411  -38.893 10.234 5.150  1.612  -0.266 C15 E3J 3  
E3J C02 C4  C 0 1 N N N N N N 6.111  -37.780 14.380 1.352  -0.256 0.110  C02 E3J 4  
E3J C04 C5  C 0 1 N N N N N N 7.090  -37.013 16.568 -1.080 -0.153 0.226  C04 E3J 5  
E3J C05 C6  C 0 1 N N N N N N 8.414  -36.492 17.182 -2.178 0.911  0.176  C05 E3J 6  
E3J C07 C7  C 0 1 N N N N N N 8.014  -34.466 16.461 -4.552 1.265  0.503  C07 E3J 7  
E3J C14 C8  C 0 1 Y N N N N N 7.041  -39.641 11.203 3.994  2.377  -0.289 C14 E3J 8  
E3J C16 C9  C 0 1 Y N N N N N 5.683  -37.781 10.598 5.078  0.241  -0.135 C16 E3J 9  
E3J C08 C10 C 0 1 N N N N N N 8.638  -33.200 15.885 -5.891 0.549  0.697  C08 E3J 10 
E3J C11 C11 C 0 1 N N N N N N 10.160 -35.261 16.927 -3.782 -0.583 -0.856 C11 E3J 11 
E3J C12 C12 C 0 1 Y N N N N N 6.224  -38.169 12.900 2.669  0.391  -0.024 C12 E3J 12 
E3J C17 C13 C 0 1 Y N N N N N 5.586  -37.427 11.932 3.841  -0.382 -0.008 C17 E3J 13 
E3J N03 N1  N 0 1 N N N N N N 7.275  -37.354 15.152 0.230  0.490  0.093  N03 E3J 14 
E3J N06 N2  N 0 1 N N N N N N 8.892  -35.550 16.461 -3.491 0.266  0.309  N06 E3J 15 
E3J O01 O1  O 0 1 N N N N N N 5.055  -37.843 14.914 1.277  -1.463 0.235  O01 E3J 16 
E3J O09 O2  O 0 1 N N N N N N 9.816  -32.904 16.540 -6.142 -0.295 -0.430 O09 E3J 17 
E3J S18 S1  S 0 1 N N N N N N 4.650  -35.962 12.399 3.745  -2.133 0.160  S18 E3J 18 
E3J H1  H1  H 0 1 N N N N N N 11.028 -34.043 15.379 -5.376 -1.866 -1.534 H1  E3J 19 
E3J H2  H2  H 0 1 N N N N N N 11.621 -33.684 17.036 -5.069 -1.938 0.219  H2  E3J 20 
E3J H3  H3  H 0 1 N N N N N N 7.434  -39.885 13.291 1.863  2.380  -0.183 H3  E3J 21 
E3J H4  H4  H 0 1 N N N N N N 6.487  -39.176 9.195  6.113  2.091  -0.365 H4  E3J 22 
E3J H5  H5  H 0 1 N N N N N N 6.320  -36.232 16.654 -1.130 -0.682 1.178  H5  E3J 23 
E3J H6  H6  H 0 1 N N N N N N 6.766  -37.910 17.116 -1.222 -0.861 -0.591 H6  E3J 24 
E3J H7  H7  H 0 1 N N N N N N 9.141  -37.316 17.232 -2.036 1.619  0.992  H7  E3J 25 
E3J H8  H8  H 0 1 N N N N N N 8.220  -36.112 18.196 -2.128 1.440  -0.776 H8  E3J 26 
E3J H9  H9  H 0 1 N N N N N N 7.704  -34.265 17.497 -4.608 1.911  -0.373 H9  E3J 27 
E3J H10 H10 H 0 1 N N N N N N 7.132  -34.728 15.859 -4.329 1.866  1.385  H10 E3J 28 
E3J H11 H11 H 0 1 N N N N N N 7.615  -40.511 10.920 4.062  3.449  -0.401 H11 E3J 29 
E3J H12 H12 H 0 1 N N N N N N 5.189  -37.187 9.843  5.983  -0.348 -0.119 H12 E3J 30 
E3J H13 H13 H 0 1 N N N N N N 8.846  -33.353 14.816 -5.853 -0.055 1.603  H13 E3J 31 
E3J H14 H14 H 0 1 N N N N N N 7.936  -32.362 16.006 -6.689 1.287  0.784  H14 E3J 32 
E3J H15 H15 H 0 1 N N N N N N 10.835 -36.068 16.605 -2.998 -1.332 -0.965 H15 E3J 33 
E3J H16 H16 H 0 1 N N N N N N 10.122 -35.231 18.026 -3.826 0.033  -1.754 H16 E3J 34 
E3J H17 H17 H 0 1 N N N N N N 8.178  -37.296 14.726 0.289  1.453  -0.008 H17 E3J 35 
E3J H19 H19 H 0 1 N N N N N N 4.783  -35.957 13.692 3.802  -2.314 1.491  H19 E3J 36 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
E3J C15 C16 DOUB Y N 1  
E3J C15 C14 SING Y N 2  
E3J C16 C17 SING Y N 3  
E3J C14 C13 DOUB Y N 4  
E3J C17 S18 SING N N 5  
E3J C17 C12 DOUB Y N 6  
E3J C13 C12 SING Y N 7  
E3J C12 C02 SING N N 8  
E3J C02 O01 DOUB N N 9  
E3J C02 N03 SING N N 10 
E3J N03 C04 SING N N 11 
E3J C08 C07 SING N N 12 
E3J C08 O09 SING N N 13 
E3J C10 O09 SING N N 14 
E3J C10 C11 SING N N 15 
E3J C07 N06 SING N N 16 
E3J N06 C11 SING N N 17 
E3J N06 C05 SING N N 18 
E3J C04 C05 SING N N 19 
E3J C10 H1  SING N N 20 
E3J C10 H2  SING N N 21 
E3J C13 H3  SING N N 22 
E3J C15 H4  SING N N 23 
E3J C04 H5  SING N N 24 
E3J C04 H6  SING N N 25 
E3J C05 H7  SING N N 26 
E3J C05 H8  SING N N 27 
E3J C07 H9  SING N N 28 
E3J C07 H10 SING N N 29 
E3J C14 H11 SING N N 30 
E3J C16 H12 SING N N 31 
E3J C08 H13 SING N N 32 
E3J C08 H14 SING N N 33 
E3J C11 H15 SING N N 34 
E3J C11 H16 SING N N 35 
E3J N03 H17 SING N N 36 
E3J S18 H19 SING N N 37 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
E3J InChI            InChI                1.06  "InChI=1S/C13H18N2O2S/c16-13(11-3-1-2-4-12(11)18)14-5-6-15-7-9-17-10-8-15/h1-4,18H,5-10H2,(H,14,16)" 
E3J InChIKey         InChI                1.06  ZLDHBHAHQHKIKU-UHFFFAOYSA-N                                                                          
E3J SMILES_CANONICAL CACTVS               3.385 "Sc1ccccc1C(=O)NCCN2CCOCC2"                                                                          
E3J SMILES           CACTVS               3.385 "Sc1ccccc1C(=O)NCCN2CCOCC2"                                                                          
E3J SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)C(=O)NCCN2CCOCC2)S"                                                                      
E3J SMILES           "OpenEye OEToolkits" 2.0.7 "c1ccc(c(c1)C(=O)NCCN2CCOCC2)S"                                                                      
# 
_pdbx_chem_comp_identifier.comp_id           E3J 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{N}-(2-morpholin-4-ylethyl)-2-sulfanyl-benzamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
E3J "Create component"  2021-12-23 PDBE 
E3J "Modify descriptor" 2022-08-22 RCSB 
E3J "Initial release"   2022-11-23 RCSB 
E3J "Modify PCM"        2024-09-27 PDBE 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            E3J 
_pdbx_chem_comp_pcm.modified_residue_id                CYS 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               S18 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   SG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
