data_B8J
# 
_chem_comp.id                                    B8J 
_chem_comp.name                                  "1-[1-(3-{5-(1H-imidazole-5-carbonyl)-3-[4-(trifluoromethyl)phenyl]-4,5,6,7-tetrahydro-1H-pyrazolo[4,3-c]pyridin-1-yl}propyl)piperidin-4-yl]-3-methyl-1,3-dihydro-2H-benzimidazol-2-one" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C33 H35 F3 N8 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-08-07 
_chem_comp.pdbx_modified_date                    2017-12-15 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        632.679 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     B8J 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5QBU 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
B8J C1  C1  C 0 1 Y N N 48.158 -1.265  39.310 7.049  -0.452 -0.985 C1  B8J 1  
B8J C14 C2  C 0 1 N N N 48.503 -3.523  39.202 7.342  1.514  0.007  C14 B8J 2  
B8J C2  C3  C 0 1 Y N N 47.726 0.030   39.581 6.703  -1.535 -1.778 C2  B8J 3  
B8J C20 C4  C 0 1 N N N 46.667 -2.859  40.773 5.843  1.547  -1.998 C20 B8J 4  
B8J C22 C5  C 0 1 N N N 45.334 -3.006  40.059 5.520  2.971  -1.538 C22 B8J 5  
B8J C23 C6  C 0 1 N N N 44.241 -3.351  41.052 4.763  2.913  -0.209 C23 B8J 6  
B8J C25 C7  C 0 1 N N N 45.425 -2.380  42.893 3.813  0.757  -0.778 C25 B8J 7  
B8J C26 C8  C 0 1 N N N 46.516 -1.884  41.940 4.541  0.751  -2.124 C26 B8J 8  
B8J C3  C9  C 0 1 Y N N 48.353 1.082   38.927 7.203  -2.789 -1.487 C3  B8J 9  
B8J C33 C10 C 0 1 N N N 43.844 -4.252  43.280 2.706  2.182  0.836  C33 B8J 10 
B8J C35 C11 C 0 1 N N N 42.861 -3.323  43.939 1.327  1.587  0.542  C35 B8J 11 
B8J C37 C12 C 0 1 N N N 42.105 -4.025  45.042 0.473  1.628  1.811  C37 B8J 12 
B8J C4  C13 C 0 1 Y N N 49.384 0.848   38.027 8.049  -2.968 -0.405 C4  B8J 13 
B8J C42 C14 C 0 1 Y N N 39.734 -5.946  43.273 -2.968 0.916  0.947  C42 B8J 14 
B8J C43 C15 C 0 1 Y N N 40.131 -6.931  44.210 -2.497 -0.354 1.308  C43 B8J 15 
B8J C44 C16 C 0 1 Y N N 41.053 -6.335  44.992 -1.193 -0.235 1.658  C44 B8J 16 
B8J C5  C17 C 0 1 Y N N 49.815 -0.451  37.754 8.399  -1.896 0.391  C5  B8J 17 
B8J C50 C18 C 0 1 N N N 41.751 -7.015  46.143 -0.321 -1.382 2.103  C50 B8J 18 
B8J C51 C19 C 0 1 N N N 41.096 -8.398  46.421 -1.219 -2.553 2.523  C51 B8J 19 
B8J C53 C20 C 0 1 N N N 39.717 -8.327  44.460 -3.259 -1.658 1.327  C53 B8J 20 
B8J C59 C21 C 0 1 N N N 38.523 -8.581  46.528 -2.337 -3.866 0.780  C59 B8J 21 
B8J C6  C22 C 0 1 Y N N 49.187 -1.496  38.408 7.906  -0.632 0.102  C6  B8J 22 
B8J C63 C23 C 0 1 Y N N 38.429 -8.693  48.026 -3.291 -3.966 -0.331 C63 B8J 23 
B8J C66 C24 C 0 1 Y N N 37.819 -9.449  49.943 -4.640 -3.462 -1.984 C66 B8J 24 
B8J C68 C25 C 0 1 Y N N 38.985 -7.888  48.973 -3.848 -5.108 -0.831 C68 B8J 25 
B8J C74 C26 C 0 1 Y N N 38.779 -6.023  42.192 -4.345 1.243  0.500  C74 B8J 26 
B8J C76 C27 C 0 1 Y N N 38.452 -7.244  41.607 -4.924 2.460  0.853  C76 B8J 27 
B8J C77 C28 C 0 1 Y N N 37.544 -7.303  40.569 -6.204 2.760  0.434  C77 B8J 28 
B8J C78 C29 C 0 1 Y N N 36.942 -6.145  40.077 -6.913 1.854  -0.334 C78 B8J 29 
B8J C79 C30 C 0 1 Y N N 37.271 -4.927  40.662 -6.343 0.644  -0.687 C79 B8J 30 
B8J C80 C31 C 0 1 Y N N 38.180 -4.864  41.703 -5.061 0.337  -0.279 C80 B8J 31 
B8J C87 C32 C 0 1 N N N 35.950 -6.208  38.958 -8.311 2.187  -0.789 C87 B8J 32 
B8J C95 C33 C 0 1 N N N 50.384 -3.542  37.517 8.881  0.901  1.883  C95 B8J 33 
B8J F91 F1  F 0 1 N N N 34.790 -5.716  39.306 -8.257 2.839  -2.025 F91 B8J 34 
B8J F93 F2  F 0 1 N N N 35.707 -7.454  38.536 -9.053 1.007  -0.915 F93 B8J 35 
B8J F97 F3  F 0 1 N N N 36.304 -5.500  37.895 -8.921 3.023  0.153  F97 B8J 36 
B8J N13 N1  N 0 1 N N N 47.746 -2.523  39.798 6.719  0.901  -1.017 N13 B8J 37 
B8J N15 N2  N 0 1 N N N 49.389 -2.869  38.349 8.070  0.617  0.698  N15 B8J 38 
B8J N24 N3  N 0 1 N N N 44.810 -3.612  42.371 3.525  2.142  -0.383 N24 B8J 39 
B8J N39 N4  N 0 1 Y N N 41.221 -5.062  44.542 -0.847 1.059  1.530  N39 B8J 40 
B8J N41 N5  N 0 1 Y N N 40.410 -4.791  43.469 -1.971 1.768  1.082  N41 B8J 41 
B8J N52 N6  N 0 1 N N N 39.713 -8.468  45.895 -2.273 -2.737 1.515  N52 B8J 42 
B8J N65 N7  N 0 1 Y N N 37.680 -9.675  48.646 -3.808 -2.923 -1.074 N65 B8J 43 
B8J N67 N8  N 0 1 Y N N 38.592 -8.387  50.183 -4.658 -4.761 -1.832 N67 B8J 44 
B8J O61 O1  O 0 1 N N N 37.463 -8.595  45.908 -1.603 -4.802 1.038  O61 B8J 45 
B8J O95 O2  O 0 1 N N N 48.413 -4.725  39.390 7.265  2.701  0.264  O95 B8J 46 
B8J H1  H1  H 0 1 N N N 46.924 0.212   40.281 6.044  -1.398 -2.623 H1  B8J 47 
B8J H2  H2  H 0 1 N N N 46.910 -3.841  41.206 6.344  1.582  -2.966 H2  B8J 48 
B8J H3  H3  H 0 1 N N N 45.084 -2.059  39.558 6.446  3.530  -1.406 H3  B8J 49 
B8J H4  H4  H 0 1 N N N 45.410 -3.808  39.310 4.901  3.464  -2.288 H4  B8J 50 
B8J H5  H5  H 0 1 N N N 43.537 -2.509  41.122 5.388  2.432  0.543  H5  B8J 51 
B8J H6  H6  H 0 1 N N N 43.707 -4.248  40.705 4.518  3.925  0.114  H6  B8J 52 
B8J H7  H7  H 0 1 N N N 45.870 -2.586  43.878 2.879  0.204  -0.868 H7  B8J 53 
B8J H8  H8  H 0 1 N N N 44.652 -1.604  42.995 4.443  0.287  -0.023 H8  B8J 54 
B8J H9  H9  H 0 1 N N N 47.470 -1.813  42.483 3.907  1.209  -2.884 H9  B8J 55 
B8J H10 H10 H 0 1 N N N 46.240 -0.892  41.553 4.769  -0.276 -2.410 H10 B8J 56 
B8J H11 H11 H 0 1 N N N 48.035 2.096   39.121 6.934  -3.632 -2.105 H11 B8J 57 
B8J H12 H12 H 0 1 N N N 43.274 -4.993  42.701 2.593  3.215  1.165  H12 B8J 58 
B8J H13 H13 H 0 1 N N N 44.411 -4.763  44.072 3.192  1.602  1.620  H13 B8J 59 
B8J H14 H14 H 0 1 N N N 43.405 -2.467  44.365 0.840  2.167  -0.242 H14 B8J 60 
B8J H15 H15 H 0 1 N N N 42.145 -2.964  43.185 1.439  0.554  0.213  H15 B8J 61 
B8J H16 H16 H 0 1 N N N 42.831 -4.483  45.730 0.960  1.048  2.596  H16 B8J 62 
B8J H17 H17 H 0 1 N N N 41.503 -3.281  45.585 0.361  2.661  2.140  H17 B8J 63 
B8J H18 H18 H 0 1 N N N 49.859 1.682   37.532 8.436  -3.952 -0.183 H18 B8J 64 
B8J H19 H19 H 0 1 N N N 50.615 -0.635  37.053 9.058  -2.040 1.234  H19 B8J 65 
B8J H20 H20 H 0 1 N N N 42.812 -7.159  45.892 0.324  -1.693 1.281  H20 B8J 66 
B8J H21 H21 H 0 1 N N N 41.669 -6.386  47.042 0.290  -1.069 2.950  H21 B8J 67 
B8J H22 H22 H 0 1 N N N 41.073 -8.569  47.507 -0.622 -3.462 2.596  H22 B8J 68 
B8J H23 H23 H 0 1 N N N 41.700 -9.181  45.940 -1.672 -2.336 3.490  H23 B8J 69 
B8J H24 H24 H 0 1 N N N 38.712 -8.511  44.051 -3.971 -1.658 2.152  H24 B8J 70 
B8J H25 H25 H 0 1 N N N 40.432 -9.029  44.005 -3.784 -1.794 0.382  H25 B8J 71 
B8J H26 H26 H 0 1 N N N 37.362 -10.051 50.714 -5.203 -2.909 -2.721 H26 B8J 72 
B8J H27 H27 H 0 1 N N N 39.612 -7.026  48.802 -3.666 -6.113 -0.479 H27 B8J 73 
B8J H28 H28 H 0 1 N N N 38.912 -8.152  41.968 -4.372 3.168  1.453  H28 B8J 74 
B8J H29 H29 H 0 1 N N N 37.296 -8.259  40.132 -6.654 3.703  0.707  H29 B8J 75 
B8J H30 H30 H 0 1 N N N 36.811 -4.019  40.299 -6.901 -0.060 -1.287 H30 B8J 76 
B8J H31 H31 H 0 1 N N N 38.427 -3.908  42.140 -4.617 -0.608 -0.555 H31 B8J 77 
B8J H32 H32 H 0 1 N N N 50.318 -4.629  37.673 9.897  1.152  1.577  H32 B8J 78 
B8J H33 H33 H 0 1 N N N 50.193 -3.311  36.459 8.448  1.741  2.427  H33 B8J 79 
B8J H34 H34 H 0 1 N N N 51.390 -3.192  37.793 8.903  0.023  2.529  H34 B8J 80 
B8J H36 H36 H 0 1 N N N 37.148 -10.400 48.209 -3.610 -1.980 -0.961 H36 B8J 81 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
B8J C95 N15 SING N N 1  
B8J C5  C4  DOUB Y N 2  
B8J C5  C6  SING Y N 3  
B8J F97 C87 SING N N 4  
B8J C4  C3  SING Y N 5  
B8J N15 C6  SING N N 6  
B8J N15 C14 SING N N 7  
B8J C6  C1  DOUB Y N 8  
B8J F93 C87 SING N N 9  
B8J C3  C2  DOUB Y N 10 
B8J C87 F91 SING N N 11 
B8J C87 C78 SING N N 12 
B8J C14 O95 DOUB N N 13 
B8J C14 N13 SING N N 14 
B8J C1  C2  SING Y N 15 
B8J C1  N13 SING N N 16 
B8J N13 C20 SING N N 17 
B8J C22 C20 SING N N 18 
B8J C22 C23 SING N N 19 
B8J C78 C77 DOUB Y N 20 
B8J C78 C79 SING Y N 21 
B8J C77 C76 SING Y N 22 
B8J C79 C80 DOUB Y N 23 
B8J C20 C26 SING N N 24 
B8J C23 N24 SING N N 25 
B8J C76 C74 DOUB Y N 26 
B8J C80 C74 SING Y N 27 
B8J C26 C25 SING N N 28 
B8J C74 C42 SING N N 29 
B8J N24 C25 SING N N 30 
B8J N24 C33 SING N N 31 
B8J C42 N41 DOUB Y N 32 
B8J C42 C43 SING Y N 33 
B8J C33 C35 SING N N 34 
B8J N41 N39 SING Y N 35 
B8J C35 C37 SING N N 36 
B8J C43 C53 SING N N 37 
B8J C43 C44 DOUB Y N 38 
B8J C53 N52 SING N N 39 
B8J N39 C44 SING Y N 40 
B8J N39 C37 SING N N 41 
B8J C44 C50 SING N N 42 
B8J N52 C51 SING N N 43 
B8J N52 C59 SING N N 44 
B8J O61 C59 DOUB N N 45 
B8J C50 C51 SING N N 46 
B8J C59 C63 SING N N 47 
B8J C63 N65 SING Y N 48 
B8J C63 C68 DOUB Y N 49 
B8J N65 C66 SING Y N 50 
B8J C68 N67 SING Y N 51 
B8J C66 N67 DOUB Y N 52 
B8J C2  H1  SING N N 53 
B8J C20 H2  SING N N 54 
B8J C22 H3  SING N N 55 
B8J C22 H4  SING N N 56 
B8J C23 H5  SING N N 57 
B8J C23 H6  SING N N 58 
B8J C25 H7  SING N N 59 
B8J C25 H8  SING N N 60 
B8J C26 H9  SING N N 61 
B8J C26 H10 SING N N 62 
B8J C3  H11 SING N N 63 
B8J C33 H12 SING N N 64 
B8J C33 H13 SING N N 65 
B8J C35 H14 SING N N 66 
B8J C35 H15 SING N N 67 
B8J C37 H16 SING N N 68 
B8J C37 H17 SING N N 69 
B8J C4  H18 SING N N 70 
B8J C5  H19 SING N N 71 
B8J C50 H20 SING N N 72 
B8J C50 H21 SING N N 73 
B8J C51 H22 SING N N 74 
B8J C51 H23 SING N N 75 
B8J C53 H24 SING N N 76 
B8J C53 H25 SING N N 77 
B8J C66 H26 SING N N 78 
B8J C68 H27 SING N N 79 
B8J C76 H28 SING N N 80 
B8J C77 H29 SING N N 81 
B8J C79 H30 SING N N 82 
B8J C80 H31 SING N N 83 
B8J C95 H32 SING N N 84 
B8J C95 H33 SING N N 85 
B8J C95 H34 SING N N 86 
B8J N65 H36 SING N N 87 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
B8J SMILES           ACDLabs              12.01 "c21ccccc1N(C(=O)N2C3CCN(CC3)CCCn4c6c(c(n4)c5ccc(cc5)C(F)(F)F)CN(CC6)C(c7ncnc7)=O)C" 
B8J InChI            InChI                1.03  
"InChI=1S/C33H35F3N8O2/c1-40-28-5-2-3-6-29(28)44(32(40)46)24-11-16-41(17-12-24)14-4-15-43-27-13-18-42(31(45)26-19-37-21-38-26)20-25(27)30(39-43)22-7-9-23(10-8-22)33(34,35)36/h2-3,5-10,19,21,24H,4,11-18,20H2,1H3,(H,37,38)" 
B8J InChIKey         InChI                1.03  MHNXUUQVKHVSPU-UHFFFAOYSA-N 
B8J SMILES_CANONICAL CACTVS               3.385 "CN1C(=O)N(C2CCN(CCCn3nc(c4ccc(cc4)C(F)(F)F)c5CN(CCc35)C(=O)c6[nH]cnc6)CC2)c7ccccc17" 
B8J SMILES           CACTVS               3.385 "CN1C(=O)N(C2CCN(CCCn3nc(c4ccc(cc4)C(F)(F)F)c5CN(CCc35)C(=O)c6[nH]cnc6)CC2)c7ccccc17" 
B8J SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "CN1c2ccccc2N(C1=O)C3CCN(CC3)CCCn4c5c(c(n4)c6ccc(cc6)C(F)(F)F)CN(CC5)C(=O)c7cnc[nH]7" 
B8J SMILES           "OpenEye OEToolkits" 2.0.6 "CN1c2ccccc2N(C1=O)C3CCN(CC3)CCCn4c5c(c(n4)c6ccc(cc6)C(F)(F)F)CN(CC5)C(=O)c7cnc[nH]7" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
B8J "SYSTEMATIC NAME" ACDLabs              12.01 "1-[1-(3-{5-(1H-imidazole-5-carbonyl)-3-[4-(trifluoromethyl)phenyl]-4,5,6,7-tetrahydro-1H-pyrazolo[4,3-c]pyridin-1-yl}propyl)piperidin-4-yl]-3-methyl-1,3-dihydro-2H-benzimidazol-2-one" 
B8J "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "1-[1-[3-[5-(1~{H}-imidazol-5-ylcarbonyl)-3-[4-(trifluoromethyl)phenyl]-6,7-dihydro-4~{H}-pyrazolo[4,3-c]pyridin-1-yl]propyl]piperidin-4-yl]-3-methyl-benzimidazol-2-one"                
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
B8J "Create component" 2017-08-07 RCSB 
B8J "Initial release"  2017-12-20 RCSB 
# 
