data_A1ALJ
# 
_chem_comp.id                                    A1ALJ 
_chem_comp.name                                  "1-[11-(dipyrrometheneboron difluoride)undecanoyl]-rac-glycerol" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C27 H41 B F2 N2 O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "[(2~{S})-2,3-bis(oxidanyl)propyl] 11-[2,2-bis(fluoranyl)-4,6,10,12-tetramethyl-1$l^{4},3-diaza-2$l^{4}-boratricyclo[7.3.0.0^{3,7}]dodeca-1(12),4,6,8,10-pentaen-8-yl]undecanoate" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-04-09 
_chem_comp.pdbx_modified_date                    2024-04-12 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        506.433 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1ALJ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   Y 
_chem_comp.pdbx_model_coordinates_db_code        9BCB 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1ALJ C11  C1  C 0 1 N N N N N N 11.180 -0.587 25.682 ? ? ? C11  A1ALJ 1  
A1ALJ C12  C2  C 0 1 N N S N N N 11.710 -1.996 25.886 ? ? ? C12  A1ALJ 2  
A1ALJ C13  C3  C 0 1 N N N N N N 11.022 -2.587 27.118 ? ? ? C13  A1ALJ 3  
A1ALJ C14  C4  C 0 1 N N N N N N 10.904 1.311  26.991 ? ? ? C14  A1ALJ 4  
A1ALJ C36  C5  C 0 1 N N N N N N 9.103  7.873  28.903 ? ? ? C36  A1ALJ 5  
A1ALJ C35  C6  C 0 1 N N N N N N 13.883 8.208  29.607 ? ? ? C35  A1ALJ 6  
A1ALJ C34  C7  C 0 1 N N N N N N 12.534 9.515  36.027 ? ? ? C34  A1ALJ 7  
A1ALJ C33  C8  C 0 1 N N N N N N 7.853  9.031  34.790 ? ? ? C33  A1ALJ 8  
A1ALJ C24  C9  C 0 1 Y N N N N N 11.841 8.302  31.234 ? ? ? C24  A1ALJ 9  
A1ALJ C30  C10 C 0 1 Y N N N N N 12.385 8.170  29.913 ? ? ? C30  A1ALJ 10 
A1ALJ C29  C11 C 0 1 Y N N N N N 11.500 8.014  29.107 ? ? ? C29  A1ALJ 11 
A1ALJ C27  C12 C 0 1 N N N N N N 9.370  9.058  34.609 ? ? ? C27  A1ALJ 12 
A1ALJ C28  C13 C 0 1 Y N N N N N 10.422 8.038  29.656 ? ? ? C28  A1ALJ 13 
A1ALJ C26  C14 C 0 1 N N N N N N 10.157 9.307  35.540 ? ? ? C26  A1ALJ 14 
A1ALJ C25  C15 C 0 1 N N N N N N 11.319 9.259  35.129 ? ? ? C25  A1ALJ 15 
A1ALJ C19  C16 C 0 1 N N N N N N 12.489 8.651  32.673 ? ? ? C19  A1ALJ 16 
A1ALJ C20  C17 C 0 1 N N N N N N 11.469 8.969  33.762 ? ? ? C20  A1ALJ 17 
A1ALJ C17  C18 C 0 1 N N N N N N 11.616 2.409  27.776 ? ? ? C17  A1ALJ 18 
A1ALJ B22  B1  B 0 1 N N N N N N 9.426  8.384  32.016 ? ? ? B22  A1ALJ 19 
A1ALJ C01  C19 C 0 1 N N N N N N 13.947 8.346  33.002 ? ? ? C01  A1ALJ 20 
A1ALJ C02  C20 C 0 1 N N N N N N 10.705 3.604  28.031 ? ? ? C02  A1ALJ 21 
A1ALJ C03  C21 C 0 1 N N N N N N 9.904  3.465  29.329 ? ? ? C03  A1ALJ 22 
A1ALJ C04  C22 C 0 1 N N N N N N 10.766 3.200  30.564 ? ? ? C04  A1ALJ 23 
A1ALJ C05  C23 C 0 1 N N N N N N 11.086 4.489  31.323 ? ? ? C05  A1ALJ 24 
A1ALJ C06  C24 C 0 1 N N N N N N 11.906 4.153  32.570 ? ? ? C06  A1ALJ 25 
A1ALJ C07  C25 C 0 1 N N N N N N 12.212 5.428  33.357 ? ? ? C07  A1ALJ 26 
A1ALJ C08  C26 C 0 1 N N N N N N 13.649 5.862  33.067 ? ? ? C08  A1ALJ 27 
A1ALJ C09  C27 C 0 1 N N N N N N 14.002 7.101  33.886 ? ? ? C09  A1ALJ 28 
A1ALJ F31  F1  F 0 1 N N N N N N 8.399  9.571  31.476 ? ? ? F31  A1ALJ 29 
A1ALJ F32  F2  F 0 1 N N N N N N 8.670  6.936  32.324 ? ? ? F32  A1ALJ 30 
A1ALJ N21  N1  N 1 1 N N N N N N 9.934  8.820  33.394 ? ? ? N21  A1ALJ 31 
A1ALJ N23  N2  N 0 1 Y N N N N N 10.427 8.197  30.995 ? ? ? N23  A1ALJ 32 
A1ALJ O10  O1  O 0 1 N N N N N N 10.290 -1.633 27.847 ? ? ? O10  A1ALJ 33 
A1ALJ O15  O2  O 0 1 N N N N N N 9.813  1.452  26.537 ? ? ? O15  A1ALJ 34 
A1ALJ O16  O3  O 0 1 N N N N N N 11.593 0.118  26.812 ? ? ? O16  A1ALJ 35 
A1ALJ O18  O4  O 0 1 N N N N N N 13.102 -1.921 26.074 ? ? ? O18  A1ALJ 36 
A1ALJ H112 H1  H 0 0 N N N N N N 10.082 -0.593 25.609 ? ? ? H112 A1ALJ 37 
A1ALJ H111 H2  H 0 0 N N N N N N 11.606 -0.141 24.771 ? ? ? H111 A1ALJ 38 
A1ALJ H121 H3  H 0 0 N N N N N N 11.464 -2.608 25.006 ? ? ? H121 A1ALJ 39 
A1ALJ H132 H4  H 0 0 N N N N N N 10.335 -3.380 26.789 ? ? ? H132 A1ALJ 40 
A1ALJ H131 H5  H 0 0 N N N N N N 11.791 -3.018 27.777 ? ? ? H131 A1ALJ 41 
A1ALJ H361 H6  H 0 0 N N N N N N 8.732  8.861  28.592 ? ? ? H361 A1ALJ 42 
A1ALJ H362 H7  H 0 0 N N N N N N 9.264  7.245  28.014 ? ? ? H362 A1ALJ 43 
A1ALJ H363 H8  H 0 0 N N N N N N 8.363  7.394  29.561 ? ? ? H363 A1ALJ 44 
A1ALJ H351 H9  H 0 0 N N N N N N 14.190 9.244  29.402 ? ? ? H351 A1ALJ 45 
A1ALJ H353 H10 H 0 0 N N N N N N 14.444 7.824  30.472 ? ? ? H353 A1ALJ 46 
A1ALJ H352 H11 H 0 0 N N N N N N 14.093 7.583  28.727 ? ? ? H352 A1ALJ 47 
A1ALJ H341 H12 H 0 0 N N N N N N 12.195 9.721  37.053 ? ? ? H341 A1ALJ 48 
A1ALJ H342 H13 H 0 0 N N N N N N 13.183 8.627  36.027 ? ? ? H342 A1ALJ 49 
A1ALJ H343 H14 H 0 0 N N N N N N 13.096 10.380 35.645 ? ? ? H343 A1ALJ 50 
A1ALJ H331 H15 H 0 0 N N N N N N 7.373  8.789  33.830 ? ? ? H331 A1ALJ 51 
A1ALJ H333 H16 H 0 0 N N N N N N 7.586  8.268  35.536 ? ? ? H333 A1ALJ 52 
A1ALJ H332 H17 H 0 0 N N N N N N 7.507  10.017 35.135 ? ? ? H332 A1ALJ 53 
A1ALJ H291 H18 H 0 0 N N N N N N 11.649 7.873  28.047 ? ? ? H291 A1ALJ 54 
A1ALJ H261 H19 H 0 0 N N N N N N 9.866  9.531  36.556 ? ? ? H261 A1ALJ 55 
A1ALJ H172 H20 H 0 0 N N N N N N 12.492 2.745  27.203 ? ? ? H172 A1ALJ 56 
A1ALJ H171 H21 H 0 0 N N N N N N 11.945 2.000  28.742 ? ? ? H171 A1ALJ 57 
A1ALJ H011 H22 H 0 0 N N N N N N 14.392 9.199  33.536 ? ? ? H011 A1ALJ 58 
A1ALJ H012 H23 H 0 0 N N N N N N 14.506 8.164  32.072 ? ? ? H012 A1ALJ 59 
A1ALJ H021 H24 H 0 0 N N N N N N 10.001 3.697  27.191 ? ? ? H021 A1ALJ 60 
A1ALJ H022 H25 H 0 0 N N N N N N 11.323 4.512  28.094 ? ? ? H022 A1ALJ 61 
A1ALJ H031 H26 H 0 0 N N N N N N 9.343  4.397  29.492 ? ? ? H031 A1ALJ 62 
A1ALJ H032 H27 H 0 0 N N N N N N 9.199  2.629  29.213 ? ? ? H032 A1ALJ 63 
A1ALJ H041 H28 H 0 0 N N N N N N 10.225 2.517  31.235 ? ? ? H041 A1ALJ 64 
A1ALJ H042 H29 H 0 0 N N N N N N 11.709 2.731  30.246 ? ? ? H042 A1ALJ 65 
A1ALJ H052 H30 H 0 0 N N N N N N 11.664 5.163  30.674 ? ? ? H052 A1ALJ 66 
A1ALJ H051 H31 H 0 0 N N N N N N 10.149 4.982  31.622 ? ? ? H051 A1ALJ 67 
A1ALJ H062 H32 H 0 0 N N N N N N 11.334 3.461  33.206 ? ? ? H062 A1ALJ 68 
A1ALJ H061 H33 H 0 0 N N N N N N 12.850 3.677  32.267 ? ? ? H061 A1ALJ 69 
A1ALJ H072 H34 H 0 0 N N N N N N 11.518 6.225  33.052 ? ? ? H072 A1ALJ 70 
A1ALJ H071 H35 H 0 0 N N N N N N 12.096 5.233  34.433 ? ? ? H071 A1ALJ 71 
A1ALJ H082 H36 H 0 0 N N N N N N 14.336 5.044  33.331 ? ? ? H082 A1ALJ 72 
A1ALJ H081 H37 H 0 0 N N N N N N 13.749 6.094  31.996 ? ? ? H081 A1ALJ 73 
A1ALJ H092 H38 H 0 0 N N N N N N 15.017 6.990  34.296 ? ? ? H092 A1ALJ 74 
A1ALJ H091 H39 H 0 0 N N N N N N 13.283 7.209  34.712 ? ? ? H091 A1ALJ 75 
A1ALJ H101 H40 H 0 0 N N N N N N 9.885  -2.050 28.598 ? ? ? H101 A1ALJ 76 
A1ALJ H181 H41 H 0 0 N N N N N N 13.452 -2.795 26.203 ? ? ? H181 A1ALJ 77 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1ALJ C01 C09  SING N N 1  
A1ALJ C02 C03  SING N N 2  
A1ALJ C04 C03  SING N N 3  
A1ALJ C05 C04  SING N N 4  
A1ALJ C06 C05  SING N N 5  
A1ALJ C07 C06  SING N N 6  
A1ALJ C08 C07  SING N N 7  
A1ALJ C09 C08  SING N N 8  
A1ALJ C11 O16  SING N N 9  
A1ALJ C12 C11  SING N N 10 
A1ALJ C13 C12  SING N N 11 
A1ALJ C13 O10  SING N N 12 
A1ALJ C14 O15  DOUB N N 13 
A1ALJ C14 O16  SING N N 14 
A1ALJ C02 C17  SING N N 15 
A1ALJ C17 C14  SING N N 16 
A1ALJ C12 O18  SING N N 17 
A1ALJ C01 C19  SING N N 18 
A1ALJ C19 C20  DOUB N N 19 
A1ALJ C20 N21  SING N N 20 
A1ALJ N21 B22  SING N N 21 
A1ALJ B22 N23  SING N N 22 
A1ALJ N23 C24  SING Y N 23 
A1ALJ C24 C19  SING N N 24 
A1ALJ C20 C25  SING N N 25 
A1ALJ C25 C26  DOUB N N 26 
A1ALJ C26 C27  SING N N 27 
A1ALJ C27 N21  DOUB N N 28 
A1ALJ N23 C28  SING Y N 29 
A1ALJ C28 C29  DOUB Y N 30 
A1ALJ C29 C30  SING Y N 31 
A1ALJ C30 C24  DOUB Y N 32 
A1ALJ B22 F31  SING N N 33 
A1ALJ B22 F32  SING N N 34 
A1ALJ C27 C33  SING N N 35 
A1ALJ C25 C34  SING N N 36 
A1ALJ C30 C35  SING N N 37 
A1ALJ C28 C36  SING N N 38 
A1ALJ C11 H112 SING N N 39 
A1ALJ C11 H111 SING N N 40 
A1ALJ C12 H121 SING N N 41 
A1ALJ C13 H132 SING N N 42 
A1ALJ C13 H131 SING N N 43 
A1ALJ C36 H361 SING N N 44 
A1ALJ C36 H362 SING N N 45 
A1ALJ C36 H363 SING N N 46 
A1ALJ C35 H351 SING N N 47 
A1ALJ C35 H353 SING N N 48 
A1ALJ C35 H352 SING N N 49 
A1ALJ C34 H341 SING N N 50 
A1ALJ C34 H342 SING N N 51 
A1ALJ C34 H343 SING N N 52 
A1ALJ C33 H331 SING N N 53 
A1ALJ C33 H333 SING N N 54 
A1ALJ C33 H332 SING N N 55 
A1ALJ C29 H291 SING N N 56 
A1ALJ C26 H261 SING N N 57 
A1ALJ C17 H172 SING N N 58 
A1ALJ C17 H171 SING N N 59 
A1ALJ C01 H011 SING N N 60 
A1ALJ C01 H012 SING N N 61 
A1ALJ C02 H021 SING N N 62 
A1ALJ C02 H022 SING N N 63 
A1ALJ C03 H031 SING N N 64 
A1ALJ C03 H032 SING N N 65 
A1ALJ C04 H041 SING N N 66 
A1ALJ C04 H042 SING N N 67 
A1ALJ C05 H052 SING N N 68 
A1ALJ C05 H051 SING N N 69 
A1ALJ C06 H062 SING N N 70 
A1ALJ C06 H061 SING N N 71 
A1ALJ C07 H072 SING N N 72 
A1ALJ C07 H071 SING N N 73 
A1ALJ C08 H082 SING N N 74 
A1ALJ C08 H081 SING N N 75 
A1ALJ C09 H092 SING N N 76 
A1ALJ C09 H091 SING N N 77 
A1ALJ O10 H101 SING N N 78 
A1ALJ O18 H181 SING N N 79 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1ALJ InChI            InChI                1.06  "InChI=1S/C27H41BF2N2O4/c1-19-15-21(3)31-26(19)24(27-20(2)16-22(4)32(27)28(31,29)30)13-11-9-7-5-6-8-10-12-14-25(35)36-18-23(34)17-33/h15-16,23,33-34H,5-14,17-18H2,1-4H3/t23-/m0/s1" 
A1ALJ InChIKey         InChI                1.06  MYLJZUQNPWUJDF-QHCPKHFHSA-N                                                                                                                                                          
A1ALJ SMILES_CANONICAL CACTVS               3.385 "Cc1cc(C)c2n1[B-](F)(F)[N+]3=C(C)C=C(C)C3=C2CCCCCCCCCCC(=O)OC[C@@H](O)CO"                                                                                                            
A1ALJ SMILES           CACTVS               3.385 "Cc1cc(C)c2n1[B-](F)(F)[N+]3=C(C)C=C(C)C3=C2CCCCCCCCCCC(=O)OC[CH](O)CO"                                                                                                              
A1ALJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "B1(n2c(cc(c2C(=C3[N]1=C(C=C3C)C)CCCCCCCCCCC(=O)OC[C@H](CO)O)C)C)(F)F"                                                                                                               
A1ALJ SMILES           "OpenEye OEToolkits" 2.0.7 "B1(n2c(cc(c2C(=C3[N]1=C(C=C3C)C)CCCCCCCCCCC(=O)OCC(CO)O)C)C)(F)F"                                                                                                                   
# 
_pdbx_chem_comp_identifier.comp_id           A1ALJ 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "[(2~{S})-2,3-bis(oxidanyl)propyl] 11-[2,2-bis(fluoranyl)-4,6,10,12-tetramethyl-1$l^{4},3-diaza-2$l^{4}-boratricyclo[7.3.0.0^{3,7}]dodeca-1(12),4,6,8,10-pentaen-8-yl]undecanoate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1ALJ "Create component" 2024-04-09 RCSB 
A1ALJ "Initial release"  2024-04-17 RCSB 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      A1ALJ 
_pdbx_chem_comp_synonyms.name         "[(2~{S})-2,3-bis(oxidanyl)propyl] 11-[2,2-bis(fluoranyl)-4,6,10,12-tetramethyl-1$l^{4},3-diaza-2$l^{4}-boratricyclo[7.3.0.0^{3,7}]dodeca-1(12),4,6,8,10-pentaen-8-yl]undecanoate" 
_pdbx_chem_comp_synonyms.provenance   PDB 
_pdbx_chem_comp_synonyms.type         ? 
# 
