data_A1AIJ
# 
_chem_comp.id                                    A1AIJ 
_chem_comp.name                                  verinurad 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H16 N2 O2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "2-{[(3P)-3-(4-cyanonaphthalen-1-yl)pyridin-4-yl]sulfanyl}-2-methylpropanoic acid" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2024-03-18 
_chem_comp.pdbx_modified_date                    2024-09-13 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        348.418 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     A1AIJ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        9B1I 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
A1AIJ C01 C1  C 0 1 N N N N N N 119.355 123.797 118.311 3.463  0.048  1.992  C01 A1AIJ 1  
A1AIJ C02 C2  C 0 1 N N N N N N 119.756 123.437 119.739 2.847  1.112  1.082  C02 A1AIJ 2  
A1AIJ C03 C3  C 0 1 N N N N N N 119.778 124.693 120.601 2.966  2.484  1.750  C03 A1AIJ 3  
A1AIJ C04 C4  C 0 1 N N N N N N 118.765 122.432 120.325 3.577  1.130  -0.236 C04 A1AIJ 4  
A1AIJ C08 C5  C 0 1 Y N N N N N 121.559 121.543 118.320 1.253  -0.873 0.080  C08 A1AIJ 5  
A1AIJ C09 C6  C 0 1 Y N N N N N 122.793 121.335 117.727 0.113  -1.649 -0.208 C09 A1AIJ 6  
A1AIJ C10 C7  C 0 1 Y N N N N N 122.873 120.449 116.667 0.286  -2.909 -0.778 C10 A1AIJ 7  
A1AIJ C12 C8  C 0 1 Y N N N N N 120.629 119.985 116.783 2.581  -2.662 -0.788 C12 A1AIJ 8  
A1AIJ C13 C9  C 0 1 Y N N N N N 120.454 120.854 117.846 2.504  -1.406 -0.225 C13 A1AIJ 9  
A1AIJ C14 C10 C 0 1 Y N N N N N 124.021 122.083 118.232 -1.242 -1.136 0.089  C14 A1AIJ 10 
A1AIJ C15 C11 C 0 1 Y N N N N N 124.569 123.104 117.467 -2.024 -1.765 1.043  C15 A1AIJ 11 
A1AIJ C16 C12 C 0 1 Y N N N N N 125.686 123.793 117.922 -3.295 -1.314 1.349  C16 A1AIJ 12 
A1AIJ C17 C13 C 0 1 Y N N N N N 126.252 123.462 119.143 -3.832 -0.206 0.701  C17 A1AIJ 13 
A1AIJ C18 C14 C 0 1 Y N N N N N 125.695 122.430 119.919 -3.031 0.480  -0.312 C18 A1AIJ 14 
A1AIJ C19 C15 C 0 1 Y N N N N N 126.271 122.100 121.155 -3.522 1.599  -0.996 C19 A1AIJ 15 
A1AIJ C20 C16 C 0 1 Y N N N N N 125.725 121.082 121.923 -2.744 2.210  -1.934 C20 A1AIJ 16 
A1AIJ C21 C17 C 0 1 Y N N N N N 124.609 120.388 121.472 -1.467 1.737  -2.222 C21 A1AIJ 17 
A1AIJ C22 C18 C 0 1 Y N N N N N 124.039 120.715 120.252 -0.960 0.650  -1.575 C22 A1AIJ 18 
A1AIJ C23 C19 C 0 1 Y N N N N N 124.592 121.746 119.471 -1.732 0.000  -0.600 C23 A1AIJ 19 
A1AIJ C24 C20 C 0 1 N N N N N N 127.478 124.221 119.639 -5.149 0.256  1.020  C24 A1AIJ 20 
A1AIJ N11 N1  N 0 1 Y N N N N N 121.811 119.804 116.230 1.492  -3.366 -1.042 N11 A1AIJ 21 
A1AIJ N25 N2  N 0 1 N N N N N N 128.387 124.788 120.003 -6.194 0.622  1.274  N25 A1AIJ 22 
A1AIJ O05 O1  O 0 1 N N N N N N 117.792 122.027 119.638 2.978  0.905  -1.261 O05 A1AIJ 23 
A1AIJ O06 O2  O 0 1 N N N N N N 118.922 122.011 121.502 4.892  1.395  -0.271 O06 A1AIJ 24 
A1AIJ S07 S1  S 0 1 N N N N N N 121.411 122.699 119.714 1.101  0.728  0.800  S07 A1AIJ 25 
A1AIJ H1  H1  H 0 1 N N N N N N 118.351 124.246 118.314 4.543  0.186  2.033  H1  A1AIJ 26 
A1AIJ H2  H2  H 0 1 N N N N N N 120.077 124.516 117.898 3.046  0.141  2.995  H2  A1AIJ 27 
A1AIJ H3  H3  H 0 1 N N N N N N 119.348 122.888 117.692 3.238  -0.943 1.597  H3  A1AIJ 28 
A1AIJ H4  H4  H 0 1 N N N N N N 120.067 124.428 121.629 4.018  2.753  1.842  H4  A1AIJ 29 
A1AIJ H5  H5  H 0 1 N N N N N N 120.505 125.408 120.188 2.452  3.229  1.142  H5  A1AIJ 30 
A1AIJ H6  H6  H 0 1 N N N N N N 118.778 125.150 120.608 2.512  2.447  2.740  H6  A1AIJ 31 
A1AIJ H7  H7  H 0 1 N N N N N N 123.827 120.283 116.188 -0.578 -3.516 -1.005 H7  A1AIJ 32 
A1AIJ H8  H8  H 0 1 N N N N N N 119.778 119.443 116.398 3.549  -3.078 -1.027 H8  A1AIJ 33 
A1AIJ H9  H9  H 0 1 N N N N N N 119.481 120.992 118.295 3.403  -0.842 -0.024 H9  A1AIJ 34 
A1AIJ H10 H10 H 0 1 N N N N N N 124.126 123.363 116.517 -1.632 -2.628 1.561  H10 A1AIJ 35 
A1AIJ H11 H11 H 0 1 N N N N N N 126.113 124.585 117.325 -3.878 -1.829 2.098  H11 A1AIJ 36 
A1AIJ H12 H12 H 0 1 N N N N N N 127.138 122.638 121.508 -4.511 1.976  -0.781 H12 A1AIJ 37 
A1AIJ H13 H13 H 0 1 N N N N N N 126.169 120.828 122.874 -3.124 3.074  -2.460 H13 A1AIJ 38 
A1AIJ H14 H14 H 0 1 N N N N N N 124.186 119.595 122.071 -0.869 2.237  -2.970 H14 A1AIJ 39 
A1AIJ H15 H15 H 0 1 N N N N N N 123.170 120.178 119.901 0.032  0.293  -1.809 H15 A1AIJ 40 
A1AIJ H16 H16 H 0 1 N N N N N N 118.227 121.400 121.716 5.317  1.395  -1.140 H16 A1AIJ 41 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
A1AIJ N11 C10 DOUB Y N 1  
A1AIJ N11 C12 SING Y N 2  
A1AIJ C10 C09 SING Y N 3  
A1AIJ C12 C13 DOUB Y N 4  
A1AIJ C15 C16 DOUB Y N 5  
A1AIJ C15 C14 SING Y N 6  
A1AIJ C09 C14 SING N N 7  
A1AIJ C09 C08 DOUB Y N 8  
A1AIJ C13 C08 SING Y N 9  
A1AIJ C16 C17 SING Y N 10 
A1AIJ C14 C23 DOUB Y N 11 
A1AIJ C01 C02 SING N N 12 
A1AIJ C08 S07 SING N N 13 
A1AIJ C17 C24 SING N N 14 
A1AIJ C17 C18 DOUB Y N 15 
A1AIJ C23 C18 SING Y N 16 
A1AIJ C23 C22 SING Y N 17 
A1AIJ O05 C04 DOUB N N 18 
A1AIJ C24 N25 TRIP N N 19 
A1AIJ S07 C02 SING N N 20 
A1AIJ C02 C04 SING N N 21 
A1AIJ C02 C03 SING N N 22 
A1AIJ C18 C19 SING Y N 23 
A1AIJ C22 C21 DOUB Y N 24 
A1AIJ C04 O06 SING N N 25 
A1AIJ C19 C20 DOUB Y N 26 
A1AIJ C21 C20 SING Y N 27 
A1AIJ C01 H1  SING N N 28 
A1AIJ C01 H2  SING N N 29 
A1AIJ C01 H3  SING N N 30 
A1AIJ C03 H4  SING N N 31 
A1AIJ C03 H5  SING N N 32 
A1AIJ C03 H6  SING N N 33 
A1AIJ C10 H7  SING N N 34 
A1AIJ C12 H8  SING N N 35 
A1AIJ C13 H9  SING N N 36 
A1AIJ C15 H10 SING N N 37 
A1AIJ C16 H11 SING N N 38 
A1AIJ C19 H12 SING N N 39 
A1AIJ C20 H13 SING N N 40 
A1AIJ C21 H14 SING N N 41 
A1AIJ C22 H15 SING N N 42 
A1AIJ O06 H16 SING N N 43 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
A1AIJ SMILES           ACDLabs              12.01 "O=C(O)C(C)(C)Sc1ccncc1c1ccc(C#N)c2ccccc12"                                                                                  
A1AIJ InChI            InChI                1.06  "InChI=1S/C20H16N2O2S/c1-20(2,19(23)24)25-18-9-10-22-12-17(18)16-8-7-13(11-21)14-5-3-4-6-15(14)16/h3-10,12H,1-2H3,(H,23,24)" 
A1AIJ InChIKey         InChI                1.06  YYBOLPLTQDKXPM-UHFFFAOYSA-N                                                                                                  
A1AIJ SMILES_CANONICAL CACTVS               3.385 "CC(C)(Sc1ccncc1c2ccc(C#N)c3ccccc23)C(O)=O"                                                                                  
A1AIJ SMILES           CACTVS               3.385 "CC(C)(Sc1ccncc1c2ccc(C#N)c3ccccc23)C(O)=O"                                                                                  
A1AIJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC(C)(C(=O)O)Sc1ccncc1c2ccc(c3c2cccc3)C#N"                                                                                  
A1AIJ SMILES           "OpenEye OEToolkits" 2.0.7 "CC(C)(C(=O)O)Sc1ccncc1c2ccc(c3c2cccc3)C#N"                                                                                  
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
A1AIJ "SYSTEMATIC NAME" ACDLabs              12.01 "2-{[(3P)-3-(4-cyanonaphthalen-1-yl)pyridin-4-yl]sulfanyl}-2-methylpropanoic acid" 
A1AIJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-[3-(4-cyanonaphthalen-1-yl)pyridin-4-yl]sulfanyl-2-methyl-propanoic acid"       
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
A1AIJ "Create component" 2024-03-18 RCSB 
A1AIJ "Initial release"  2024-09-18 RCSB 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      A1AIJ 
_pdbx_chem_comp_synonyms.name         "2-{[(3P)-3-(4-cyanonaphthalen-1-yl)pyridin-4-yl]sulfanyl}-2-methylpropanoic acid" 
_pdbx_chem_comp_synonyms.provenance   PDB 
_pdbx_chem_comp_synonyms.type         "systematic name" 
# 
