data_9TJ
# 
_chem_comp.id                                    9TJ 
_chem_comp.name                                  "3-{1-[(2R)-2-borono-2-{[(thiophen-2-yl)acetyl]amino}ethyl]-1H-1,2,3-triazol-4-yl}benzoic acid" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C17 H17 B N4 O5 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "boronic acid transition state inhibitor S03043" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2017-06-07 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        400.217 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9TJ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5W14 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9TJ C2  C1  C 0 1 N N R N N N 39.828 -11.450 -9.763  -1.566 -1.003 0.479  C2  9TJ 1  
9TJ C6  C2  C 0 1 N N N N N N 40.992 -11.782 -8.830  -0.588 -0.760 1.630  C6  9TJ 2  
9TJ C8  C3  C 0 1 Y N N N N N 42.481 -9.833  -8.025  1.679  0.253  1.278  C8  9TJ 3  
9TJ B1  B1  B 0 1 N N N N N N 38.334 -11.484 -9.114  -1.247 -2.384 -0.196 B1  9TJ 4  
9TJ O3  O1  O 0 1 N N N N N N 37.981 -10.150 -8.470  -1.313 -3.579 0.567  O3  9TJ 5  
9TJ O4  O2  O 0 1 N N N N N N 38.165 -12.506 -8.010  -0.893 -2.437 -1.571 O4  9TJ 6  
9TJ N5  N1  N 0 1 N N N N N N 40.091 -10.166 -10.401 -2.936 -1.017 0.997  N5  9TJ 7  
9TJ N7  N2  N 0 1 Y N N N N N 41.435 -10.665 -8.010  0.782  -0.745 1.112  N7  9TJ 8  
9TJ C9  C4  C 0 1 Y N N N N N 42.342 -9.019  -6.914  2.815  -0.150 0.637  C9  9TJ 9  
9TJ N10 N3  N 0 1 Y N N N N N 41.261 -9.400  -6.236  2.544  -1.363 0.122  N10 9TJ 10 
9TJ N11 N4  N 0 1 Y N N N N N 40.657 -10.457 -6.904  1.335  -1.680 0.423  N11 9TJ 11 
9TJ C13 C5  C 0 1 Y N N N N N 43.241 -7.919  -6.470  4.092  0.600  0.530  C13 9TJ 12 
9TJ C14 C6  C 0 1 Y N N N N N 43.892 -7.100  -7.417  5.128  0.102  -0.252 C14 9TJ 13 
9TJ C15 C7  C 0 1 Y N N N N N 44.756 -6.049  -7.013  6.324  0.811  -0.349 C15 9TJ 14 
9TJ C16 C8  C 0 1 Y N N N N N 44.930 -5.858  -5.637  6.474  2.017  0.341  C16 9TJ 15 
9TJ C17 C9  C 0 1 Y N N N N N 44.274 -6.675  -4.677  5.441  2.504  1.115  C17 9TJ 16 
9TJ C18 C10 C 0 1 Y N N N N N 43.410 -7.704  -5.083  4.252  1.806  1.209  C18 9TJ 17 
9TJ C19 C11 C 0 1 N N N N N N 45.480 -5.173  -8.049  7.431  0.290  -1.177 C19 9TJ 18 
9TJ O20 O3  O 0 1 N N N N N N 45.625 -5.612  -9.221  7.299  -0.759 -1.776 O20 9TJ 19 
9TJ O21 O4  O 0 1 N N N N N N 45.917 -4.007  -7.798  8.585  0.977  -1.269 O21 9TJ 20 
9TJ C22 C12 C 0 1 N N N N N N 40.926 -9.970  -11.430 -3.909 -0.345 0.349  C22 9TJ 21 
9TJ O23 O5  O 0 1 N N N N N N 41.695 -10.807 -11.871 -3.650 0.271  -0.663 O23 9TJ 22 
9TJ C24 C13 C 0 1 N N N N N N 40.861 -8.626  -12.113 -5.318 -0.360 0.882  C24 9TJ 23 
9TJ C25 C14 C 0 1 Y N N N N N 42.219 -8.038  -12.371 -6.205 0.460  -0.020 C25 9TJ 24 
9TJ C26 C15 C 0 1 Y N N N N N 43.047 -7.979  -13.489 -6.877 -0.009 -1.072 C26 9TJ 25 
9TJ C27 C16 C 0 1 Y N N N N N 44.238 -7.286  -13.246 -7.629 0.933  -1.752 C27 9TJ 26 
9TJ C28 C17 C 0 1 Y N N N N N 44.303 -6.806  -11.933 -7.567 2.168  -1.252 C28 9TJ 27 
9TJ S29 S1  S 0 1 Y N N N N N 42.891 -7.213  -11.009 -6.517 2.182  0.159  S29 9TJ 28 
9TJ H1  H1  H 0 1 N N N N N N 39.826 -12.217 -10.551 -1.465 -0.206 -0.258 H1  9TJ 29 
9TJ H2  H2  H 0 1 N N N N N N 40.677 -12.597 -8.162  -0.809 0.199  2.099  H2  9TJ 30 
9TJ H3  H3  H 0 1 N N N N N N 41.841 -12.118 -9.443  -0.689 -1.556 2.367  H3  9TJ 31 
9TJ H4  H4  H 0 1 N N N N N N 43.275 -9.802  -8.757  1.526  1.182  1.806  H4  9TJ 32 
9TJ H5  H5  H 0 1 N N N N N N 37.107 -10.198 -8.101  -1.100 -4.378 0.066  H5  9TJ 33 
9TJ H6  H6  H 0 1 N N N N N N 37.275 -12.471 -7.679  -0.715 -3.330 -1.896 H6  9TJ 34 
9TJ H7  H7  H 0 1 N N N N N N 39.609 -9.367  -10.041 -3.144 -1.510 1.806  H7  9TJ 35 
9TJ H8  H8  H 0 1 N N N N N N 43.730 -7.276  -8.470  5.007  -0.831 -0.783 H8  9TJ 36 
9TJ H9  H9  H 0 1 N N N N N N 45.581 -5.067  -5.295  7.400  2.569  0.268  H9  9TJ 37 
9TJ H10 H10 H 0 1 N N N N N N 44.442 -6.502  -3.624  5.560  3.437  1.647  H10 9TJ 38 
9TJ H11 H11 H 0 1 N N N N N N 42.890 -8.313  -4.358  3.445  2.195  1.814  H11 9TJ 39 
9TJ H12 H12 H 0 1 N N N N N N 46.304 -3.638  -8.583  9.280  0.596  -1.823 H12 9TJ 40 
9TJ H13 H13 H 0 1 N N N N N N 40.294 -7.934  -11.473 -5.684 -1.387 0.914  H13 9TJ 41 
9TJ H14 H14 H 0 1 N N N N N N 40.341 -8.745  -13.075 -5.331 0.062  1.886  H14 9TJ 42 
9TJ H15 H15 H 0 1 N N N N N N 42.797 -8.421  -14.442 -6.838 -1.047 -1.370 H15 9TJ 43 
9TJ H16 H16 H 0 1 N N N N N N 45.014 -7.139  -13.983 -8.220 0.687  -2.621 H16 9TJ 44 
9TJ H17 H17 H 0 1 N N N N N N 45.138 -6.245  -11.539 -8.085 3.028  -1.651 H17 9TJ 45 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9TJ C26 C27 SING Y N 1  
9TJ C26 C25 DOUB Y N 2  
9TJ C27 C28 DOUB Y N 3  
9TJ C25 C24 SING N N 4  
9TJ C25 S29 SING Y N 5  
9TJ C24 C22 SING N N 6  
9TJ C28 S29 SING Y N 7  
9TJ O23 C22 DOUB N N 8  
9TJ C22 N5  SING N N 9  
9TJ N5  C2  SING N N 10 
9TJ C2  B1  SING N N 11 
9TJ C2  C6  SING N N 12 
9TJ O20 C19 DOUB N N 13 
9TJ B1  O3  SING N N 14 
9TJ B1  O4  SING N N 15 
9TJ C6  N7  SING N N 16 
9TJ C19 O21 SING N N 17 
9TJ C19 C15 SING N N 18 
9TJ C8  N7  SING Y N 19 
9TJ C8  C9  DOUB Y N 20 
9TJ N7  N11 SING Y N 21 
9TJ C14 C15 DOUB Y N 22 
9TJ C14 C13 SING Y N 23 
9TJ C15 C16 SING Y N 24 
9TJ C9  C13 SING N N 25 
9TJ C9  N10 SING Y N 26 
9TJ N11 N10 DOUB Y N 27 
9TJ C13 C18 DOUB Y N 28 
9TJ C16 C17 DOUB Y N 29 
9TJ C18 C17 SING Y N 30 
9TJ C2  H1  SING N N 31 
9TJ C6  H2  SING N N 32 
9TJ C6  H3  SING N N 33 
9TJ C8  H4  SING N N 34 
9TJ O3  H5  SING N N 35 
9TJ O4  H6  SING N N 36 
9TJ N5  H7  SING N N 37 
9TJ C14 H8  SING N N 38 
9TJ C16 H9  SING N N 39 
9TJ C17 H10 SING N N 40 
9TJ C18 H11 SING N N 41 
9TJ O21 H12 SING N N 42 
9TJ C24 H13 SING N N 43 
9TJ C24 H14 SING N N 44 
9TJ C26 H15 SING N N 45 
9TJ C27 H16 SING N N 46 
9TJ C28 H17 SING N N 47 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9TJ SMILES           ACDLabs              12.01 "C(B(O)O)(Cn2cc(c1cccc(c1)C(O)=O)nn2)NC(=O)Cc3sccc3"                                                                                                               
9TJ InChI            InChI                1.03  "InChI=1S/C17H17BN4O5S/c23-16(8-13-5-2-6-28-13)19-15(18(26)27)10-22-9-14(20-21-22)11-3-1-4-12(7-11)17(24)25/h1-7,9,15,26-27H,8,10H2,(H,19,23)(H,24,25)/t15-/m0/s1" 
9TJ InChIKey         InChI                1.03  WHXOLIBPKXZPTN-HNNXBMFYSA-N                                                                                                                                        
9TJ SMILES_CANONICAL CACTVS               3.385 "OB(O)[C@H](Cn1cc(nn1)c2cccc(c2)C(O)=O)NC(=O)Cc3sccc3"                                                                                                             
9TJ SMILES           CACTVS               3.385 "OB(O)[CH](Cn1cc(nn1)c2cccc(c2)C(O)=O)NC(=O)Cc3sccc3"                                                                                                              
9TJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.6 "B([C@H](Cn1cc(nn1)c2cccc(c2)C(=O)O)NC(=O)Cc3cccs3)(O)O"                                                                                                           
9TJ SMILES           "OpenEye OEToolkits" 2.0.6 "B(C(Cn1cc(nn1)c2cccc(c2)C(=O)O)NC(=O)Cc3cccs3)(O)O"                                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
9TJ "SYSTEMATIC NAME" ACDLabs              12.01 "3-{1-[(2R)-2-borono-2-{[(thiophen-2-yl)acetyl]amino}ethyl]-1H-1,2,3-triazol-4-yl}benzoic acid"             
9TJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.6 "3-[1-[(2~{R})-2-(dihydroxyboranyl)-2-(2-thiophen-2-ylethanoylamino)ethyl]-1,2,3-triazol-4-yl]benzoic acid" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9TJ "Create component" 2017-06-07 RCSB 
9TJ "Initial release"  2017-11-29 RCSB 
9TJ "Modify synonyms"  2020-06-05 PDBE 
9TJ "Modify PCM"       2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      9TJ 
_pdbx_chem_comp_synonyms.name         "boronic acid transition state inhibitor S03043" 
_pdbx_chem_comp_synonyms.provenance   ? 
_pdbx_chem_comp_synonyms.type         ? 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            9TJ 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               B1 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
