data_9PJ
# 
_chem_comp.id                                    9PJ 
_chem_comp.name                                  "5-(difluoromethyl)-3-{[1-{[(3S)-5-fluoro-2-methyl-6-oxo-3,6-dihydropyridin-3-yl]methyl}-6-oxo-4-(1,1,2,2-tetrafluoroethyl)-1,6-dihydropyrimidin-5-yl]oxy}-2-methylbenzonitrile" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C22 H15 F7 N4 O3" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2021-10-25 
_chem_comp.pdbx_modified_date                    2022-11-18 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        516.368 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     9PJ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7SLS 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
9PJ O2  O1  O 0 1 N N N 5.944  6.705  15.189 -6.074 -1.962 1.914  O2  9PJ 1  
9PJ C21 C1  C 0 1 N N N 5.874  7.930  15.225 -5.424 -1.224 1.197  C21 9PJ 2  
9PJ N3  N1  N 0 1 N N N 6.161  8.696  14.110 -5.872 -0.970 -0.039 N3  9PJ 3  
9PJ C1  C2  C 0 1 N N N 6.257  10.073 14.085 -5.246 -0.198 -0.866 C1  9PJ 4  
9PJ C   C3  C 0 1 N N N 6.419  10.628 12.707 -5.804 0.048  -2.244 C   9PJ 5  
9PJ C20 C4  C 0 1 N N N 5.605  8.724  16.393 -4.182 -0.642 1.725  C20 9PJ 6  
9PJ F6  F1  F 0 1 N N N 5.094  8.074  17.459 -3.782 -0.931 2.983  F6  9PJ 7  
9PJ C19 C5  C 0 1 N N N 5.738  10.061 16.427 -3.448 0.173  0.960  C19 9PJ 8  
9PJ C2  C6  C 0 1 N N S 6.111  10.765 15.240 -3.952 0.456  -0.440 C2  9PJ 9  
9PJ C3  C7  C 0 1 N N N 6.449  12.229 15.342 -2.865 0.030  -1.429 C3  9PJ 10 
9PJ N   N2  N 0 1 N N N 7.886  12.475 15.408 -1.619 0.737  -1.121 N   9PJ 11 
9PJ C16 C8  C 0 1 N N N 8.538  12.152 16.595 -0.731 0.198  -0.259 C16 9PJ 12 
9PJ O1  O2  O 0 1 N N N 7.914  11.731 17.554 -0.951 -0.879 0.271  O1  9PJ 13 
9PJ C6  C9  C 0 1 N N N 9.945  12.433 16.580 0.462  0.909  0.015  C6  9PJ 14 
9PJ C5  C10 C 0 1 N N N 10.513 13.010 15.473 0.661  2.109  -0.603 C5  9PJ 15 
9PJ C17 C11 C 0 1 N N N 11.978 13.407 15.454 1.919  2.896  -0.337 C17 9PJ 16 
9PJ F3  F2  F 0 1 N N N 12.168 14.493 14.656 2.536  3.214  -1.552 F3  9PJ 17 
9PJ C18 C12 C 0 1 N N N 12.950 12.278 14.944 1.566  4.185  0.408  C18 9PJ 18 
9PJ F5  F3  F 0 1 N N N 12.669 11.140 15.617 0.959  3.867  1.628  F5  9PJ 19 
9PJ F4  F4  F 0 1 N N N 12.680 12.042 13.636 2.733  4.920  0.646  F4  9PJ 20 
9PJ F2  F5  F 0 1 N N N 12.399 13.780 16.696 2.792  2.130  0.443  F2  9PJ 21 
9PJ N1  N3  N 0 1 N N N 9.809  13.309 14.310 -0.260 2.585  -1.445 N1  9PJ 22 
9PJ C4  C13 C 0 1 N N N 8.545  13.015 14.347 -1.357 1.926  -1.702 C4  9PJ 23 
9PJ O   O3  O 0 1 N N N 10.749 12.097 17.654 1.388  0.408  0.876  O   9PJ 24 
9PJ C7  C14 C 0 1 Y N N 10.439 12.566 18.943 2.038  -0.732 0.522  C7  9PJ 25 
9PJ C13 C15 C 0 1 Y N N 10.183 11.638 19.958 2.894  -1.348 1.419  C13 9PJ 26 
9PJ C14 C16 C 0 1 N N N 10.092 10.159 19.675 3.108  -0.756 2.789  C14 9PJ 27 
9PJ C11 C17 C 0 1 Y N N 9.972  12.126 21.256 3.559  -2.518 1.051  C11 9PJ 28 
9PJ C12 C18 C 0 1 N N N 9.706  11.221 22.342 4.446  -3.161 1.974  C12 9PJ 29 
9PJ N2  N4  N 0 1 N N N 9.488  10.543 23.234 5.150  -3.671 2.705  N2  9PJ 30 
9PJ C10 C19 C 0 1 Y N N 10.005 13.494 21.494 3.356  -3.060 -0.220 C10 9PJ 31 
9PJ C9  C20 C 0 1 Y N N 10.239 14.403 20.468 2.500  -2.438 -1.105 C9  9PJ 32 
9PJ C8  C21 C 0 1 Y N N 10.458 13.927 19.177 1.838  -1.281 -0.737 C8  9PJ 33 
9PJ C15 C22 C 0 1 N N N 10.273 15.874 20.771 2.282  -3.025 -2.476 C15 9PJ 34 
9PJ F   F6  F 0 1 N N N 9.348  16.542 20.016 0.914  -3.236 -2.681 F   9PJ 35 
9PJ F1  F7  F 0 1 N N N 11.416 16.404 20.340 2.767  -2.139 -3.445 F1  9PJ 36 
9PJ H1  H1  H 0 1 N N N 6.429  9.804  11.978 -6.735 -0.504 -2.363 H1  9PJ 37 
9PJ H2  H2  H 0 1 N N N 5.581  11.305 12.484 -5.994 1.114  -2.374 H2  9PJ 38 
9PJ H3  H3  H 0 1 N N N 7.366  11.184 12.645 -5.085 -0.286 -2.992 H3  9PJ 39 
9PJ H4  H4  H 0 1 N N N 5.564  10.601 17.346 -2.532 0.612  1.326  H4  9PJ 40 
9PJ H5  H5  H 0 1 N N N 5.060  10.994 15.008 -4.077 1.535  -0.533 H5  9PJ 41 
9PJ H6  H6  H 0 1 N N N 6.044  12.745 14.459 -2.701 -1.045 -1.347 H6  9PJ 42 
9PJ H7  H7  H 0 1 N N N 5.981  12.635 16.251 -3.180 0.273  -2.443 H7  9PJ 43 
9PJ H8  H8  H 0 1 N N N 13.989 12.606 15.099 0.880  4.778  -0.196 H8  9PJ 44 
9PJ H9  H9  H 0 1 N N N 7.966  13.217 13.458 -2.076 2.347  -2.389 H9  9PJ 45 
9PJ H10 H10 H 0 1 N N N 11.085 9.701  19.793 2.377  -1.172 3.482  H10 9PJ 46 
9PJ H11 H11 H 0 1 N N N 9.388  9.694  20.380 4.113  -0.994 3.135  H11 9PJ 47 
9PJ H12 H12 H 0 1 N N N 9.737  10.004 18.646 2.987  0.326  2.740  H12 9PJ 48 
9PJ H13 H13 H 0 1 N N N 9.845  13.860 22.498 3.868  -3.966 -0.509 H13 9PJ 49 
9PJ H14 H14 H 0 1 N N N 10.641 14.616 18.366 1.166  -0.801 -1.434 H14 9PJ 50 
9PJ H15 H15 H 0 1 N N N 10.115 16.036 21.848 2.812  -3.974 -2.554 H15 9PJ 51 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
9PJ C   C1  SING N N 1  
9PJ F4  C18 SING N N 2  
9PJ C1  N3  DOUB N N 3  
9PJ C1  C2  SING N N 4  
9PJ N3  C21 SING N N 5  
9PJ N1  C4  DOUB N N 6  
9PJ N1  C5  SING N N 7  
9PJ C4  N   SING N N 8  
9PJ F3  C17 SING N N 9  
9PJ C18 C17 SING N N 10 
9PJ C18 F5  SING N N 11 
9PJ O2  C21 DOUB N N 12 
9PJ C21 C20 SING N N 13 
9PJ C2  C3  SING N N 14 
9PJ C2  C19 SING N N 15 
9PJ C3  N   SING N N 16 
9PJ N   C16 SING N N 17 
9PJ C17 C5  SING N N 18 
9PJ C17 F2  SING N N 19 
9PJ C5  C6  DOUB N N 20 
9PJ C20 C19 DOUB N N 21 
9PJ C20 F6  SING N N 22 
9PJ C6  C16 SING N N 23 
9PJ C6  O   SING N N 24 
9PJ C16 O1  DOUB N N 25 
9PJ O   C7  SING N N 26 
9PJ C7  C8  DOUB Y N 27 
9PJ C7  C13 SING Y N 28 
9PJ C8  C9  SING Y N 29 
9PJ C14 C13 SING N N 30 
9PJ C13 C11 DOUB Y N 31 
9PJ F   C15 SING N N 32 
9PJ F1  C15 SING N N 33 
9PJ C9  C15 SING N N 34 
9PJ C9  C10 DOUB Y N 35 
9PJ C11 C10 SING Y N 36 
9PJ C11 C12 SING N N 37 
9PJ C12 N2  TRIP N N 38 
9PJ C   H1  SING N N 39 
9PJ C   H2  SING N N 40 
9PJ C   H3  SING N N 41 
9PJ C19 H4  SING N N 42 
9PJ C2  H5  SING N N 43 
9PJ C3  H6  SING N N 44 
9PJ C3  H7  SING N N 45 
9PJ C18 H8  SING N N 46 
9PJ C4  H9  SING N N 47 
9PJ C14 H10 SING N N 48 
9PJ C14 H11 SING N N 49 
9PJ C14 H12 SING N N 50 
9PJ C10 H13 SING N N 51 
9PJ C8  H14 SING N N 52 
9PJ C15 H15 SING N N 53 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
9PJ SMILES           ACDLabs              12.01 "FC(F)C(F)(F)C=1N=CN(CC2C=C(F)C(=O)N=C2C)C(=O)C=1Oc1cc(cc(C#N)c1C)C(F)F"                                                                                                  
9PJ InChI            InChI                1.03  "InChI=1S/C22H15F7N4O3/c1-9-12(6-30)3-11(18(24)25)5-15(9)36-16-17(22(28,29)21(26)27)31-8-33(20(16)35)7-13-4-14(23)19(34)32-10(13)2/h3-5,8,13,18,21H,7H2,1-2H3/t13-/m0/s1" 
9PJ InChIKey         InChI                1.03  YVSVCEXZEPOJHL-ZDUSSCGKSA-N                                                                                                                                               
9PJ SMILES_CANONICAL CACTVS               3.385 "CC1=NC(=O)C(=C[C@H]1CN2C=NC(=C(Oc3cc(cc(C#N)c3C)C(F)F)C2=O)C(F)(F)C(F)F)F"                                                                                               
9PJ SMILES           CACTVS               3.385 "CC1=NC(=O)C(=C[CH]1CN2C=NC(=C(Oc3cc(cc(C#N)c3C)C(F)F)C2=O)C(F)(F)C(F)F)F"                                                                                                
9PJ SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1c(cc(cc1OC2=C(N=CN(C2=O)CC3C=C(C(=O)N=C3C)F)C(C(F)F)(F)F)C(F)F)C#N"                                                                                                   
9PJ SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1c(cc(cc1OC2=C(N=CN(C2=O)CC3C=C(C(=O)N=C3C)F)C(C(F)F)(F)F)C(F)F)C#N"                                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
9PJ "SYSTEMATIC NAME" ACDLabs              12.01 "5-(difluoromethyl)-3-{[1-{[(3S)-5-fluoro-2-methyl-6-oxo-3,6-dihydropyridin-3-yl]methyl}-6-oxo-4-(1,1,2,2-tetrafluoroethyl)-1,6-dihydropyrimidin-5-yl]oxy}-2-methylbenzonitrile"                      
9PJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "5-[bis(fluoranyl)methyl]-3-[1-[(5-fluoranyl-2-methyl-6-oxidanylidene-3~{H}-pyridin-3-yl)methyl]-6-oxidanylidene-4-[1,1,2,2-tetrakis(fluoranyl)ethyl]pyrimidin-5-yl]oxy-2-methyl-benzenecarbonitrile" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
9PJ "Create component" 2021-10-25 RCSB 
9PJ "Initial release"  2022-11-23 RCSB 
# 
