data_55J
# 
_chem_comp.id                                    55J 
_chem_comp.name                                  "1-methyl-5-({2-[5-(trifluoromethyl)-1H-imidazol-2-yl]pyridin-4-yl}oxy)-N-[4-(trifluoromethyl)phenyl]-1H-benzimidazol-2-amine" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H16 F6 N6 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2015-07-28 
_chem_comp.pdbx_modified_date                    2015-09-04 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        518.414 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     55J 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        5CT7 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
55J C1  C1  C 0 1 Y N N -19.280 9.437  -8.935  -0.833 -2.512 0.186  C1  55J 1  
55J C2  C2  C 0 1 Y N N -19.907 8.738  -9.971  -0.817 -3.356 1.309  C2  55J 2  
55J C3  C3  C 0 1 Y N N -19.674 9.025  -11.312 0.162  -4.330 1.432  C3  55J 3  
55J O1  O1  O 0 1 N N N -17.140 11.635 -10.927 2.064  -3.785 -1.624 O1  55J 4  
55J C11 C4  C 0 1 Y N N -16.323 13.774 -11.466 2.975  -1.687 -0.933 C11 55J 5  
55J C12 C5  C 0 1 Y N N -15.402 16.035 -11.922 3.938  0.495  -0.239 C12 55J 6  
55J C13 C6  C 0 1 Y N N -20.608 8.032  -7.992  -2.511 -1.935 1.454  C13 55J 7  
55J C14 C7  C 0 1 N N N -21.705 6.935  -10.000 -2.287 -3.558 3.377  C14 55J 8  
55J C15 C8  C 0 1 Y N N -21.726 7.565  -5.815  -4.252 -0.308 1.117  C15 55J 9  
55J C16 C9  C 0 1 Y N N -22.276 6.551  -5.042  -4.984 0.717  1.702  C16 55J 10 
55J C17 C10 C 0 1 Y N N -22.736 6.821  -3.765  -5.595 1.668  0.907  C17 55J 11 
55J C18 C11 C 0 1 Y N N -22.658 8.099  -3.232  -5.478 1.599  -0.469 C18 55J 12 
55J C19 C12 C 0 1 Y N N -22.104 9.109  -4.010  -4.750 0.580  -1.054 C19 55J 13 
55J C20 C13 C 0 1 Y N N -21.644 8.851  -5.289  -4.137 -0.374 -0.266 C20 55J 14 
55J C21 C14 C 0 1 Y N N -14.330 17.919 -12.342 3.459  1.853  1.373  C21 55J 15 
55J C22 C15 C 0 1 Y N N -13.477 16.865 -12.271 4.494  2.400  0.701  C22 55J 16 
55J C23 C16 C 0 1 N N N -23.233 8.390  -1.889  -6.147 2.638  -1.332 C23 55J 17 
55J C24 C17 C 0 1 N N N -12.012 16.855 -12.450 5.177  3.706  1.016  C24 55J 18 
55J C4  C18 C 0 1 Y N N -18.785 10.044 -11.609 1.121  -4.470 0.451  C4  55J 19 
55J C5  C19 C 0 1 Y N N -18.134 10.729 -10.581 1.113  -3.638 -0.664 C5  55J 20 
55J C6  C20 C 0 1 Y N N -18.367 10.449 -9.236  0.140  -2.667 -0.805 C6  55J 21 
55J C7  C21 C 0 1 Y N N -17.408 12.990 -11.106 2.959  -2.779 -1.794 C7  55J 22 
55J C8  C22 C 0 1 Y N N -18.652 13.572 -10.922 3.886  -2.816 -2.835 C8  55J 23 
55J C9  C23 C 0 1 Y N N -18.754 14.936 -11.121 4.783  -1.776 -2.979 C9  55J 24 
55J N1  N1  N 0 1 Y N N -17.724 15.725 -11.474 4.775  -0.753 -2.148 N1  55J 25 
55J C10 C24 C 0 1 Y N N -16.526 15.138 -11.628 3.907  -0.674 -1.145 C10 55J 26 
55J N2  N2  N 0 1 Y N N -19.744 8.984  -7.695  -1.888 -1.669 0.333  N2  55J 27 
55J N3  N3  N 0 1 Y N N -20.762 7.840  -9.345  -1.891 -2.968 2.096  N3  55J 28 
55J N4  N4  N 0 1 N N N -21.290 7.244  -7.119  -3.628 -1.269 1.918  N4  55J 29 
55J N5  N5  N 0 1 Y N N -15.576 17.424 -12.129 3.140  0.696  0.786  N5  55J 30 
55J N6  N6  N 0 1 Y N N -14.125 15.686 -12.008 4.805  1.545  -0.320 N6  55J 31 
55J F1  F1  F 0 1 N N N -23.082 9.649  -1.475  -7.299 3.105  -0.692 F1  55J 32 
55J F2  F2  F 0 1 N N N -24.510 8.144  -1.853  -5.266 3.704  -1.545 F2  55J 33 
55J F3  F3  F 0 1 N N N -22.719 7.659  -0.942  -6.494 2.068  -2.562 F3  55J 34 
55J F4  F4  F 0 1 N N N -11.660 16.349 -13.615 6.519  3.636  0.623  F4  55J 35 
55J F5  F5  F 0 1 N N N -11.483 18.067 -12.355 4.542  4.743  0.325  F5  55J 36 
55J F6  F6  F 0 1 N N N -11.413 16.103 -11.541 5.106  3.949  2.391  F6  55J 37 
55J H1  H1  H 0 1 N N N -20.170 8.471  -12.095 0.174  -4.978 2.296  H1  55J 38 
55J H2  H2  H 0 1 N N N -15.347 13.336 -11.616 2.272  -1.623 -0.116 H2  55J 39 
55J H3  H3  H 0 1 N N N -22.241 6.349  -9.239  -1.782 -3.036 4.190  H3  55J 40 
55J H4  H4  H 0 1 N N N -22.428 7.521  -10.587 -3.366 -3.466 3.502  H4  55J 41 
55J H5  H5  H 0 1 N N N -21.156 6.254  -10.668 -2.008 -4.612 3.394  H5  55J 42 
55J H6  H6  H 0 1 N N N -22.345 5.549  -5.438  -5.076 0.770  2.776  H6  55J 43 
55J H7  H7  H 0 1 N N N -23.162 6.024  -3.174  -6.164 2.465  1.362  H7  55J 44 
55J H8  H8  H 0 1 N N N -22.032 10.110 -3.610  -4.661 0.529  -2.130 H8  55J 45 
55J H9  H9  H 0 1 N N N -21.220 9.649  -5.881  -3.568 -1.170 -0.724 H9  55J 46 
55J H10 H10 H 0 1 N N N -14.068 18.950 -12.531 2.972  2.278  2.238  H10 55J 47 
55J H11 H11 H 0 1 N N N -18.595 10.310 -12.638 1.883  -5.229 0.549  H11 55J 48 
55J H12 H12 H 0 1 N N N -17.860 10.995 -8.455  0.135  -2.026 -1.674 H12 55J 49 
55J H13 H13 H 0 1 N N N -19.510 12.982 -10.634 3.902  -3.649 -3.522 H13 55J 50 
55J H14 H14 H 0 1 N N N -19.721 15.397 -10.984 5.502  -1.802 -3.784 H14 55J 51 
55J H15 H15 H 0 1 N N N -21.510 6.323  -7.440  -3.980 -1.468 2.800  H15 55J 52 
55J H17 H17 H 0 1 N N N -13.727 14.774 -11.905 5.507  1.664  -0.978 H17 55J 53 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
55J F4  C24 SING N N 1  
55J C24 F5  SING N N 2  
55J C24 C22 SING N N 3  
55J C24 F6  SING N N 4  
55J C21 C22 DOUB Y N 5  
55J C21 N5  SING Y N 6  
55J C22 N6  SING Y N 7  
55J N5  C12 DOUB Y N 8  
55J N6  C12 SING Y N 9  
55J C12 C10 SING N N 10 
55J C10 N1  DOUB Y N 11 
55J C10 C11 SING Y N 12 
55J C4  C3  DOUB Y N 13 
55J C4  C5  SING Y N 14 
55J N1  C9  SING Y N 15 
55J C11 C7  DOUB Y N 16 
55J C3  C2  SING Y N 17 
55J C9  C8  DOUB Y N 18 
55J C7  O1  SING N N 19 
55J C7  C8  SING Y N 20 
55J O1  C5  SING N N 21 
55J C5  C6  DOUB Y N 22 
55J C14 N3  SING N N 23 
55J C2  N3  SING Y N 24 
55J C2  C1  DOUB Y N 25 
55J N3  C13 SING Y N 26 
55J C6  C1  SING Y N 27 
55J C1  N2  SING Y N 28 
55J C13 N2  DOUB Y N 29 
55J C13 N4  SING N N 30 
55J N4  C15 SING N N 31 
55J C15 C20 DOUB Y N 32 
55J C15 C16 SING Y N 33 
55J C20 C19 SING Y N 34 
55J C16 C17 DOUB Y N 35 
55J C19 C18 DOUB Y N 36 
55J C17 C18 SING Y N 37 
55J C18 C23 SING N N 38 
55J C23 F2  SING N N 39 
55J C23 F1  SING N N 40 
55J C23 F3  SING N N 41 
55J C3  H1  SING N N 42 
55J C11 H2  SING N N 43 
55J C14 H3  SING N N 44 
55J C14 H4  SING N N 45 
55J C14 H5  SING N N 46 
55J C16 H6  SING N N 47 
55J C17 H7  SING N N 48 
55J C19 H8  SING N N 49 
55J C20 H9  SING N N 50 
55J C21 H10 SING N N 51 
55J C4  H11 SING N N 52 
55J C6  H12 SING N N 53 
55J C8  H13 SING N N 54 
55J C9  H14 SING N N 55 
55J N4  H15 SING N N 56 
55J N6  H17 SING N N 57 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
55J SMILES           ACDLabs              12.01 "c25nc(Nc1ccc(cc1)C(F)(F)F)n(c2ccc(Oc4cc(c3ncc(n3)C(F)(F)F)ncc4)c5)C"                                                                                                      
55J InChI            InChI                1.03  "InChI=1S/C24H16F6N6O/c1-36-19-7-6-15(10-17(19)34-22(36)33-14-4-2-13(3-5-14)23(25,26)27)37-16-8-9-31-18(11-16)21-32-12-20(35-21)24(28,29)30/h2-12H,1H3,(H,32,35)(H,33,34)" 
55J InChIKey         InChI                1.03  YABJJWZLRMPFSI-UHFFFAOYSA-N                                                                                                                                                
55J SMILES_CANONICAL CACTVS               3.385 "Cn1c(Nc2ccc(cc2)C(F)(F)F)nc3cc(Oc4ccnc(c4)c5[nH]c(cn5)C(F)(F)F)ccc13"                                                                                                     
55J SMILES           CACTVS               3.385 "Cn1c(Nc2ccc(cc2)C(F)(F)F)nc3cc(Oc4ccnc(c4)c5[nH]c(cn5)C(F)(F)F)ccc13"                                                                                                     
55J SMILES_CANONICAL "OpenEye OEToolkits" 1.9.2 "Cn1c2ccc(cc2nc1Nc3ccc(cc3)C(F)(F)F)Oc4ccnc(c4)c5[nH]c(cn5)C(F)(F)F"                                                                                                       
55J SMILES           "OpenEye OEToolkits" 1.9.2 "Cn1c2ccc(cc2nc1Nc3ccc(cc3)C(F)(F)F)Oc4ccnc(c4)c5[nH]c(cn5)C(F)(F)F"                                                                                                       
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
55J "SYSTEMATIC NAME" ACDLabs              12.01 "1-methyl-5-({2-[5-(trifluoromethyl)-1H-imidazol-2-yl]pyridin-4-yl}oxy)-N-[4-(trifluoromethyl)phenyl]-1H-benzimidazol-2-amine" 
55J "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.9.2 "1-methyl-5-[2-[5-(trifluoromethyl)-1H-imidazol-2-yl]pyridin-4-yl]oxy-N-[4-(trifluoromethyl)phenyl]benzimidazol-2-amine"       
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
55J "Create component" 2015-07-28 RCSB 
55J "Initial release"  2015-09-09 RCSB 
# 
