data_3LJ
#

_chem_comp.id                                   3LJ
_chem_comp.name                                 2-amino-2-deoxy-6-O-sulfo-alpha-D-glucopyranose
_chem_comp.type                                 "D-saccharide, alpha linking"
_chem_comp.pdbx_type                            ATOMS
_chem_comp.formula                              "C6 H13 N O8 S"
_chem_comp.mon_nstd_parent_comp_id              ?
_chem_comp.pdbx_synonyms                        
;N-acetyl-6-O-sulfo-alpha-D-glucosamine; 2-amino-2-deoxy-6-O-sulfo-alpha-D-glucose;
2-amino-2-deoxy-6-O-sulfo-D-glucose; 2-amino-2-deoxy-6-O-sulfo-glucose
;

_chem_comp.pdbx_formal_charge                   0
_chem_comp.pdbx_initial_date                    2014-09-12
_chem_comp.pdbx_modified_date                   2020-07-17
_chem_comp.pdbx_ambiguous_flag                  N
_chem_comp.pdbx_release_status                  REL
_chem_comp.pdbx_replaced_by                     ?
_chem_comp.pdbx_replaces                        ?
_chem_comp.formula_weight                       259.234
_chem_comp.one_letter_code                      ?
_chem_comp.three_letter_code                    3LJ
_chem_comp.pdbx_model_coordinates_details       ?
_chem_comp.pdbx_model_coordinates_missing_flag  N
_chem_comp.pdbx_ideal_coordinates_details       Corina
_chem_comp.pdbx_ideal_coordinates_missing_flag  N
_chem_comp.pdbx_model_coordinates_db_code       4R9J
_chem_comp.pdbx_subcomponent_list               ?
_chem_comp.pdbx_processing_site                 RCSB
#   #
loop_
_pdbx_chem_comp_synonyms.ordinal
_pdbx_chem_comp_synonyms.comp_id
_pdbx_chem_comp_synonyms.name
_pdbx_chem_comp_synonyms.provenance
_pdbx_chem_comp_synonyms.type
1  3LJ  N-acetyl-6-O-sulfo-alpha-D-glucosamine     PDB  ?  
2  3LJ  2-amino-2-deoxy-6-O-sulfo-alpha-D-glucose  PDB  ?  
3  3LJ  2-amino-2-deoxy-6-O-sulfo-D-glucose        PDB  ?  
4  3LJ  2-amino-2-deoxy-6-O-sulfo-glucose          PDB  ?  
#   #
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.alt_atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.charge
_chem_comp_atom.pdbx_align
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_leaving_atom_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.model_Cartn_x
_chem_comp_atom.model_Cartn_y
_chem_comp_atom.model_Cartn_z
_chem_comp_atom.pdbx_model_Cartn_x_ideal
_chem_comp_atom.pdbx_model_Cartn_y_ideal
_chem_comp_atom.pdbx_model_Cartn_z_ideal
_chem_comp_atom.pdbx_component_atom_id
_chem_comp_atom.pdbx_component_comp_id
_chem_comp_atom.pdbx_ordinal
3LJ  O1   O1   O  0  1  N  Y  N  53.614  6.240  -15.462   2.167   1.904  -1.173  O1   3LJ   1  
3LJ  C1   C1   C  0  1  N  N  S  54.917  5.745  -15.616   2.057   1.611   0.221  C1   3LJ   2  
3LJ  C2   C2   C  0  1  N  N  R  55.774  6.448  -14.564   3.119   0.581   0.612  C2   3LJ   3  
3LJ  C3   C3   C  0  1  N  N  R  56.628  7.602  -15.037   2.866  -0.719  -0.158  C3   3LJ   4  
3LJ  C4   C4   C  0  1  N  N  S  57.310  7.210  -16.331   1.445  -1.208   0.140  C4   3LJ   5  
3LJ  C5   C5   C  0  1  N  N  R  56.225  6.944  -17.423   0.447  -0.108  -0.232  C5   3LJ   6  
3LJ  C6   C6   C  0  1  N  N  N  56.776  6.420  -18.763  -0.970  -0.565   0.119  C6   3LJ   7  
3LJ  O3   O3   O  0  1  N  N  N  57.607  7.902  -14.005   3.809  -1.711   0.255  O3   3LJ   8  
3LJ  O4   O4   O  0  1  N  N  N  58.275  8.265  -16.529   1.172  -2.381  -0.628  O4   3LJ   9  
3LJ  O5   O5   O  0  1  N  N  N  55.326  5.865  -16.988   0.758   1.082   0.496  O5   3LJ  10  
3LJ  O6   O6   O  0  1  N  N  N  57.644  5.305  -18.476  -1.911   0.412  -0.333  O6   3LJ  11  
3LJ  N2   N    N  0  1  N  N  N  55.008  6.916  -13.427   4.452   1.098   0.276  N2   3LJ  12  
3LJ  S    S    S  0  1  N  N  N  58.087  4.367  -19.684  -3.361   0.058  -0.035  S    3LJ  13  
3LJ  O7   O7   O  0  1  N  N  N  56.944  3.752  -20.152  -4.156   1.017  -0.719  O7   3LJ  14  
3LJ  O8   O8   O  0  1  N  N  N  58.702  5.229  -20.670  -3.483  -1.342  -0.242  O8   3LJ  15  
3LJ  O9   O9   O  0  1  N  N  N  59.100  3.410  -18.885  -3.586   0.294   1.451  O9   3LJ  16  
3LJ  HO1  H1   H  0  1  N  N  N  53.349  6.158  -14.553   1.523   2.552  -1.491  HO1  3LJ  17  
3LJ  H1   H2   H  0  1  N  N  N  54.913  4.676  -15.358   2.207   2.524   0.798  H1   3LJ  18  
3LJ  H2   H3   H  0  1  N  N  N  56.472  5.687  -14.186   3.063   0.387   1.683  H2   3LJ  19  
3LJ  H3   H4   H  0  1  N  N  N  55.988  8.478  -15.216   2.973  -0.537  -1.227  H3   3LJ  20  
3LJ  H4   H5   H  0  1  N  N  N  57.845  6.264  -16.161   1.354  -1.438   1.202  H4   3LJ  21  
3LJ  H5   H6   H  0  1  N  N  N  55.656  7.869  -17.599   0.510   0.093  -1.302  H5   3LJ  22  
3LJ  H61  H7   H  0  1  N  N  N  57.343  7.214  -19.271  -1.175  -1.519  -0.367  H61  3LJ  23  
3LJ  H62  H8   H  0  1  N  N  N  55.946  6.092  -19.407  -1.058  -0.681   1.199  H62  3LJ  24  
3LJ  HO3  H9   H  0  1  N  Y  N  57.159  8.145  -13.204   4.731  -1.465   0.101  HO3  3LJ  25  
3LJ  HO4  H10  H  0  1  N  Y  N  58.863  8.301  -15.783   1.771  -3.119  -0.445  HO4  3LJ  26  
3LJ  HN2  H11  H  0  1  N  N  N  55.619  7.365  -12.775   4.641   1.959   0.768  HN2  3LJ  27  
3LJ  H12  H12  H  0  1  N  N  N  54.315  7.567  -13.737   5.166   0.410   0.465  H12  3LJ  28  
3LJ  H13  H13  H  0  1  N  N  N  58.746  2.529  -18.853  -4.485   0.098   1.749  H13  3LJ  29  
#   #
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
3LJ  O8  S    DOUB  N  N   1  
3LJ  O7  S    DOUB  N  N   2  
3LJ  S   O9   SING  N  N   3  
3LJ  S   O6   SING  N  N   4  
3LJ  C6  O6   SING  N  N   5  
3LJ  C6  C5   SING  N  N   6  
3LJ  C5  O5   SING  N  N   7  
3LJ  C5  C4   SING  N  N   8  
3LJ  O5  C1   SING  N  N   9  
3LJ  O4  C4   SING  N  N  10  
3LJ  C4  C3   SING  N  N  11  
3LJ  C1  O1   SING  N  N  12  
3LJ  C1  C2   SING  N  N  13  
3LJ  C3  C2   SING  N  N  14  
3LJ  C3  O3   SING  N  N  15  
3LJ  C2  N2   SING  N  N  16  
3LJ  O1  HO1  SING  N  N  17  
3LJ  C1  H1   SING  N  N  18  
3LJ  C2  H2   SING  N  N  19  
3LJ  C3  H3   SING  N  N  20  
3LJ  C4  H4   SING  N  N  21  
3LJ  C5  H5   SING  N  N  22  
3LJ  C6  H61  SING  N  N  23  
3LJ  C6  H62  SING  N  N  24  
3LJ  O3  HO3  SING  N  N  25  
3LJ  O4  HO4  SING  N  N  26  
3LJ  N2  HN2  SING  N  N  27  
3LJ  N2  H12  SING  N  N  28  
3LJ  O9  H13  SING  N  N  29  
#   #
loop_
_pdbx_chem_comp_descriptor.comp_id
_pdbx_chem_comp_descriptor.type
_pdbx_chem_comp_descriptor.program
_pdbx_chem_comp_descriptor.program_version
_pdbx_chem_comp_descriptor.descriptor
3LJ  SMILES            ACDLabs               12.01  "O=S(=O)(O)OCC1OC(O)C(N)C(O)C1O"  
3LJ  InChI             InChI                 1.03   "InChI=1S/C6H13NO8S/c7-3-5(9)4(8)2(15-6(3)10)1-14-16(11,12)13/h2-6,8-10H,1,7H2,(H,11,12,13)/t2-,3-,4-,5-,6+/m1/s1"  
3LJ  InChIKey          InChI                 1.03   MTDHILKWIRSIHB-UKFBFLRUSA-N  
3LJ  SMILES_CANONICAL  CACTVS                3.385  "N[C@H]1[C@@H](O)O[C@H](CO[S](O)(=O)=O)[C@@H](O)[C@@H]1O"  
3LJ  SMILES            CACTVS                3.385  "N[CH]1[CH](O)O[CH](CO[S](O)(=O)=O)[CH](O)[CH]1O"  
3LJ  SMILES_CANONICAL  "OpenEye OEToolkits"  1.7.6  "C([C@@H]1[C@H]([C@@H]([C@H]([C@H](O1)O)N)O)O)OS(=O)(=O)O"  
3LJ  SMILES            "OpenEye OEToolkits"  1.7.6  "C(C1C(C(C(C(O1)O)N)O)O)OS(=O)(=O)O"  
#   #
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
3LJ  "SYSTEMATIC NAME"                      ACDLabs               12.01  2-amino-2-deoxy-6-O-sulfo-alpha-D-glucopyranose  
3LJ  "SYSTEMATIC NAME"                      "OpenEye OEToolkits"  1.7.6  "[(2R,3S,4R,5R,6S)-5-azanyl-3,4,6-tris(oxidanyl)oxan-2-yl]methyl hydrogen sulfate"  
3LJ  "CONDENSED IUPAC CARBOHYDRATE SYMBOL"  GMML                  1.0    DGlcpN[6S]a  
3LJ  "COMMON NAME"                          GMML                  1.0    6-sulfo-a-D-glucopyranose-osamine  
3LJ  "IUPAC CARBOHYDRATE SYMBOL"            PDB-CARE              1.0    a-D-GlcpN6SO3  
#   #
loop_
_pdbx_chem_comp_feature.comp_id
_pdbx_chem_comp_feature.type
_pdbx_chem_comp_feature.value
_pdbx_chem_comp_feature.source
_pdbx_chem_comp_feature.support
3LJ  "CARBOHYDRATE ISOMER"                  D         PDB  ?  
3LJ  "CARBOHYDRATE RING"                    pyranose  PDB  ?  
3LJ  "CARBOHYDRATE ANOMER"                  alpha     PDB  ?  
3LJ  "CARBOHYDRATE PRIMARY CARBONYL GROUP"  aldose    PDB  ?  
#   #
loop_
_pdbx_chem_comp_audit.comp_id
_pdbx_chem_comp_audit.action_type
_pdbx_chem_comp_audit.date
_pdbx_chem_comp_audit.processing_site
3LJ  "Create component"          2014-09-12  RCSB  
3LJ  "Initial release"           2014-11-05  RCSB  
3LJ  "Other modification"        2020-07-03  RCSB  
3LJ  "Modify synonyms"           2020-07-17  RCSB  
3LJ  "Modify internal type"      2020-07-17  RCSB  
3LJ  "Modify linking type"       2020-07-17  RCSB  
3LJ  "Modify atom id"            2020-07-17  RCSB  
3LJ  "Modify component atom id"  2020-07-17  RCSB  
3LJ  "Modify leaving atom flag"  2020-07-17  RCSB  
##
