data_3AJ
# 
_chem_comp.id                                    3AJ 
_chem_comp.name                                  "1-({[(1R,2S,3R,5Z,7E,14beta,17alpha)-1,3,25-trihydroxy-9,10-secocholesta-5,7,10-trien-2-yl]oxy}methyl)cyclopropanecarbonitrile" 
_chem_comp.type                                  NON-POLYMER 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C32 H49 N O4" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2014-07-16 
_chem_comp.pdbx_modified_date                    2014-12-26 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        511.736 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     3AJ 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        3WWR 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBJ 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
3AJ N32 N32 N 0 1 N N N 13.180 -12.626 -30.332 6.204   4.120  1.556  N32 3AJ 1  
3AJ C29 C29 C 0 1 N N N 13.755 -12.413 -31.295 6.774   3.486  0.805  C29 3AJ 2  
3AJ C28 C28 C 0 1 N N N 14.487 -12.151 -32.527 7.514   2.664  -0.167 C28 3AJ 3  
3AJ C31 C31 C 0 1 N N N 15.656 -12.913 -31.923 8.497   3.381  -1.095 C31 3AJ 4  
3AJ C30 C30 C 0 1 N N N 15.174 -13.316 -33.257 9.021   2.505  0.044  C30 3AJ 5  
3AJ C27 C27 C 0 1 N N N 15.181 -10.793 -32.606 6.750   1.467  -0.736 C27 3AJ 6  
3AJ O25 O25 O 0 1 N N N 14.503 -9.745  -31.924 5.887   0.931  0.269  O25 3AJ 7  
3AJ C19 C19 C 0 1 N N S 15.423 -8.873  -31.333 5.123   -0.197 -0.162 C19 3AJ 8  
3AJ C18 C18 C 0 1 N N R 16.113 -8.137  -32.441 4.858   -1.117 1.031  C18 3AJ 9  
3AJ O24 O24 O 0 1 N N N 17.129 -7.310  -31.932 6.096   -1.441 1.665  O24 3AJ 10 
3AJ C17 C17 C 0 1 N N N 15.195 -7.257  -33.230 4.177   -2.404 0.552  C17 3AJ 11 
3AJ C20 C20 C 0 1 N N R 14.662 -8.013  -30.386 3.793   0.284  -0.752 C20 3AJ 12 
3AJ O23 O23 O 0 1 N N N 13.743 -8.835  -29.710 3.079   1.042  0.225  O23 3AJ 13 
3AJ C21 C21 C 0 1 N N N 13.886 -7.038  -31.150 2.980   -0.932 -1.151 C21 3AJ 14 
3AJ C22 C22 C 0 1 N N N 12.653 -6.775  -30.805 2.372   -1.008 -2.334 C22 3AJ 15 
3AJ C16 C16 C 0 1 N N N 14.481 -6.396  -32.275 2.895   -2.028 -0.164 C16 3AJ 16 
3AJ C15 C15 C 0 1 N N N 14.386 -5.101  -32.516 1.733   -2.664 0.088  C15 3AJ 17 
3AJ C14 C14 C 0 1 N N N 13.712 -4.164  -31.636 0.514   -2.273 -0.624 C14 3AJ 18 
3AJ C4  C4  C 0 1 N N N 13.612 -2.920  -32.083 -0.635  -2.901 -0.375 C4  3AJ 19 
3AJ C3  C3  C 0 1 N N N 14.197 -2.616  -33.418 -0.744  -4.027 0.642  C3  3AJ 20 
3AJ C2  C2  C 0 1 N N N 13.234 -1.737  -34.169 -1.904  -3.776 1.604  C2  3AJ 21 
3AJ C5  C5  C 0 1 N N S 12.991 -1.787  -31.345 -1.913  -2.544 -1.073 C5  3AJ 22 
3AJ C7  C7  C 0 1 N N N 12.287 -2.026  -30.029 -1.905  -1.263 -1.911 C7  3AJ 23 
3AJ C8  C8  C 0 1 N N N 11.357 -0.825  -29.907 -3.408  -0.869 -1.951 C8  3AJ 24 
3AJ C9  C9  C 0 1 N N R 11.317 -0.128  -31.264 -4.061  -1.514 -0.701 C9  3AJ 25 
3AJ C6  C6  C 0 1 N N R 11.978 -1.110  -32.207 -2.911  -2.161 0.056  C6  3AJ 26 
3AJ C10 C10 C 0 1 N N N 10.988 -2.075  -32.784 -2.261  -1.121 0.971  C10 3AJ 27 
3AJ C1  C1  C 0 1 N N N 12.774 -0.570  -33.333 -3.195  -3.406 0.855  C1  3AJ 28 
3AJ C11 C11 C 0 1 N N R 9.927  0.373   -31.647 -4.732  -0.443 0.161  C11 3AJ 29 
3AJ C26 C26 C 0 1 N N N 9.490  1.376   -30.624 -5.338  -1.096 1.406  C26 3AJ 30 
3AJ C12 C12 C 0 1 N N N 8.826  -0.661  -31.719 -5.838  0.242  -0.645 C12 3AJ 31 
3AJ C13 C13 C 0 1 N N N 7.461  -0.023  -31.938 -6.424  1.395  0.172  C13 3AJ 32 
3AJ C33 C33 C 0 1 N N N 6.369  -1.082  -31.924 -7.530  2.080  -0.634 C33 3AJ 33 
3AJ C34 C34 C 0 1 N N N 4.969  -0.565  -32.125 -8.117  3.233  0.182  C34 3AJ 34 
3AJ O37 O37 O 0 1 N N N 4.716  0.350   -31.091 -8.662  2.724  1.402  O37 3AJ 35 
3AJ C36 C36 C 0 1 N N N 3.926  -1.638  -32.019 -7.015  4.246  0.500  C36 3AJ 36 
3AJ C35 C35 C 0 1 N N N 4.856  0.050   -33.489 -9.222  3.918  -0.624 C35 3AJ 37 
3AJ H1  H1  H 0 1 N N N 15.488 -13.574 -31.060 8.599   3.000  -2.111 H1  3AJ 38 
3AJ H2  H2  H 0 1 N N N 16.634 -12.420 -31.823 8.595   4.461  -0.986 H2  3AJ 39 
3AJ H3  H3  H 0 1 N N N 14.645 -14.272 -33.383 9.465   3.009  0.903  H3  3AJ 40 
3AJ H4  H4  H 0 1 N N N 15.791 -13.118 -34.146 9.468   1.547  -0.222 H4  3AJ 41 
3AJ H5  H5  H 0 1 N N N 16.185 -10.894 -32.169 6.155   1.789  -1.591 H5  3AJ 42 
3AJ H6  H6  H 0 1 N N N 15.269 -10.513 -33.666 7.458   0.701  -1.053 H6  3AJ 43 
3AJ H7  H7  H 0 1 N N N 16.175 -9.444  -30.768 5.681   -0.743 -0.923 H7  3AJ 44 
3AJ H8  H8  H 0 1 N N N 16.552 -8.878  -33.125 4.208   -0.608 1.743  H8  3AJ 45 
3AJ H9  H9  H 0 1 N N N 17.737 -7.832  -31.422 6.005   -2.023 2.431  H9  3AJ 46 
3AJ H10 H10 H 0 1 N N N 15.776 -6.640  -33.931 4.838   -2.935 -0.132 H10 3AJ 47 
3AJ H11 H11 H 0 1 N N N 14.476 -7.872  -33.792 3.948   -3.037 1.409  H11 3AJ 48 
3AJ H12 H12 H 0 1 N N N 15.347 -7.509  -29.689 3.984   0.902  -1.630 H12 3AJ 49 
3AJ H13 H13 H 0 1 N N N 13.241 -8.312  -29.096 2.226   1.377  -0.083 H13 3AJ 50 
3AJ H14 H14 H 0 1 N N N 12.210 -7.278  -29.958 2.452   -0.191 -3.036 H14 3AJ 51 
3AJ H15 H15 H 0 1 N N N 12.077 -6.055  -31.367 1.799   -1.887 -2.591 H15 3AJ 52 
3AJ H16 H16 H 0 1 N N N 14.836 -4.717  -33.420 1.700   -3.462 0.816  H16 3AJ 53 
3AJ H17 H17 H 0 1 N N N 13.316 -4.462  -30.676 0.547   -1.475 -1.352 H17 3AJ 54 
3AJ H18 H18 H 0 1 N N N 14.358 -3.551  -33.975 -0.909  -4.969 0.119  H18 3AJ 55 
3AJ H19 H19 H 0 1 N N N 15.157 -2.094  -33.293 0.185   -4.090 1.210  H19 3AJ 56 
3AJ H20 H20 H 0 1 N N N 13.731 -1.354  -35.072 -2.080  -4.678 2.191  H20 3AJ 57 
3AJ H21 H21 H 0 1 N N N 12.357 -2.335  -34.459 -1.638  -2.962 2.277  H21 3AJ 58 
3AJ H22 H22 H 0 1 N N N 13.788 -1.054  -31.150 -2.280  -3.386 -1.660 H22 3AJ 59 
3AJ H23 H23 H 0 1 N N N 11.716 -2.966  -30.052 -1.314  -0.487 -1.424 H23 3AJ 60 
3AJ H24 H24 H 0 1 N N N 13.006 -2.054  -29.197 -1.531  -1.462 -2.916 H24 3AJ 61 
3AJ H25 H25 H 0 1 N N N 11.738 -0.133  -29.142 -3.512  0.215  -1.910 H25 3AJ 62 
3AJ H26 H26 H 0 1 N N N 10.347 -1.160  -29.628 -3.873  -1.255 -2.858 H26 3AJ 63 
3AJ H27 H27 H 0 1 N N N 11.972 0.753   -31.196 -4.789  -2.269 -1.001 H27 3AJ 64 
3AJ H28 H28 H 0 1 N N N 10.375 -2.500  -31.975 -2.120  -0.191 0.421  H28 3AJ 65 
3AJ H29 H29 H 0 1 N N N 10.338 -1.550  -33.499 -2.905  -0.941 1.831  H29 3AJ 66 
3AJ H30 H30 H 0 1 N N N 11.524 -2.884  -33.301 -1.294  -1.492 1.312  H30 3AJ 67 
3AJ H31 H31 H 0 1 N N N 13.644 -0.020  -32.947 -3.485  -4.220 0.191  H31 3AJ 68 
3AJ H32 H32 H 0 1 N N N 12.154 0.105   -33.941 -3.994  -3.210 1.571  H32 3AJ 69 
3AJ H33 H33 H 0 1 N N N 9.998  0.875   -32.623 -3.991  0.297  0.463  H33 3AJ 70 
3AJ H34 H34 H 0 1 N N N 10.256 2.159   -30.527 -5.816  -0.332 2.020  H34 3AJ 71 
3AJ H35 H35 H 0 1 N N N 8.539  1.831   -30.939 -6.079  -1.836 1.104  H35 3AJ 72 
3AJ H36 H36 H 0 1 N N N 9.353  0.875   -29.654 -4.550  -1.583 1.980  H36 3AJ 73 
3AJ H37 H37 H 0 1 N N N 8.807  -1.226  -30.776 -5.422  0.630  -1.575 H37 3AJ 74 
3AJ H38 H38 H 0 1 N N N 9.036  -1.347  -32.553 -6.622  -0.480 -0.871 H38 3AJ 75 
3AJ H39 H39 H 0 1 N N N 7.454  0.491   -32.910 -6.840  1.007  1.102  H39 3AJ 76 
3AJ H40 H40 H 0 1 N N N 7.269  0.705   -31.136 -5.639  2.116  0.398  H40 3AJ 77 
3AJ H41 H41 H 0 1 N N N 6.406  -1.595  -30.952 -7.114  2.468  -1.564 H41 3AJ 78 
3AJ H42 H42 H 0 1 N N N 6.584  -1.802  -32.727 -8.315  1.358  -0.860 H42 3AJ 79 
3AJ H43 H43 H 0 1 N N N 4.800  -0.088  -30.252 -9.367  2.075  1.276  H43 3AJ 80 
3AJ H44 H44 H 0 1 N N N 3.984  -2.109  -31.027 -6.599  4.634  -0.430 H44 3AJ 81 
3AJ H45 H45 H 0 1 N N N 2.929  -1.195  -32.157 -7.433  5.067  1.082  H45 3AJ 82 
3AJ H46 H46 H 0 1 N N N 4.101  -2.397  -32.796 -6.227  3.758  1.074  H46 3AJ 83 
3AJ H47 H47 H 0 1 N N N 5.610  0.843   -33.598 -8.807  4.306  -1.554 H47 3AJ 84 
3AJ H48 H48 H 0 1 N N N 5.023  -0.722  -34.254 -10.007 3.196  -0.850 H48 3AJ 85 
3AJ H49 H49 H 0 1 N N N 3.851  0.480   -33.615 -9.641  4.739  -0.042 H49 3AJ 86 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
3AJ C2  C3  SING N N 1  
3AJ C2  C1  SING N N 2  
3AJ C35 C34 SING N N 3  
3AJ C3  C4  SING N N 4  
3AJ C1  C6  SING N N 5  
3AJ C30 C28 SING N N 6  
3AJ C30 C31 SING N N 7  
3AJ C17 C18 SING N N 8  
3AJ C17 C16 SING N N 9  
3AJ C10 C6  SING N N 10 
3AJ C27 C28 SING N N 11 
3AJ C27 O25 SING N N 12 
3AJ C28 C31 SING N N 13 
3AJ C28 C29 SING N N 14 
3AJ C15 C16 DOUB N Z 15 
3AJ C15 C14 SING N N 16 
3AJ C18 O24 SING N N 17 
3AJ C18 C19 SING N N 18 
3AJ C16 C21 SING N N 19 
3AJ C6  C5  SING N N 20 
3AJ C6  C9  SING N N 21 
3AJ C34 C36 SING N N 22 
3AJ C34 C33 SING N N 23 
3AJ C34 O37 SING N N 24 
3AJ C4  C14 DOUB N E 25 
3AJ C4  C5  SING N N 26 
3AJ C13 C33 SING N N 27 
3AJ C13 C12 SING N N 28 
3AJ O25 C19 SING N N 29 
3AJ C12 C11 SING N N 30 
3AJ C11 C9  SING N N 31 
3AJ C11 C26 SING N N 32 
3AJ C5  C7  SING N N 33 
3AJ C19 C20 SING N N 34 
3AJ C29 N32 TRIP N N 35 
3AJ C9  C8  SING N N 36 
3AJ C21 C22 DOUB N N 37 
3AJ C21 C20 SING N N 38 
3AJ C20 O23 SING N N 39 
3AJ C7  C8  SING N N 40 
3AJ C31 H1  SING N N 41 
3AJ C31 H2  SING N N 42 
3AJ C30 H3  SING N N 43 
3AJ C30 H4  SING N N 44 
3AJ C27 H5  SING N N 45 
3AJ C27 H6  SING N N 46 
3AJ C19 H7  SING N N 47 
3AJ C18 H8  SING N N 48 
3AJ O24 H9  SING N N 49 
3AJ C17 H10 SING N N 50 
3AJ C17 H11 SING N N 51 
3AJ C20 H12 SING N N 52 
3AJ O23 H13 SING N N 53 
3AJ C22 H14 SING N N 54 
3AJ C22 H15 SING N N 55 
3AJ C15 H16 SING N N 56 
3AJ C14 H17 SING N N 57 
3AJ C3  H18 SING N N 58 
3AJ C3  H19 SING N N 59 
3AJ C2  H20 SING N N 60 
3AJ C2  H21 SING N N 61 
3AJ C5  H22 SING N N 62 
3AJ C7  H23 SING N N 63 
3AJ C7  H24 SING N N 64 
3AJ C8  H25 SING N N 65 
3AJ C8  H26 SING N N 66 
3AJ C9  H27 SING N N 67 
3AJ C10 H28 SING N N 68 
3AJ C10 H29 SING N N 69 
3AJ C10 H30 SING N N 70 
3AJ C1  H31 SING N N 71 
3AJ C1  H32 SING N N 72 
3AJ C11 H33 SING N N 73 
3AJ C26 H34 SING N N 74 
3AJ C26 H35 SING N N 75 
3AJ C26 H36 SING N N 76 
3AJ C12 H37 SING N N 77 
3AJ C12 H38 SING N N 78 
3AJ C13 H39 SING N N 79 
3AJ C13 H40 SING N N 80 
3AJ C33 H41 SING N N 81 
3AJ C33 H42 SING N N 82 
3AJ O37 H43 SING N N 83 
3AJ C36 H44 SING N N 84 
3AJ C36 H45 SING N N 85 
3AJ C36 H46 SING N N 86 
3AJ C35 H47 SING N N 87 
3AJ C35 H48 SING N N 88 
3AJ C35 H49 SING N N 89 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
3AJ SMILES           ACDLabs              12.01 "N#CC4(COC3C(O)C(\C(=C/C=C1\CCCC2(C)C(C(C)CCCC(O)(C)C)CCC12)CC3O)=C)CC4" 
3AJ InChI            InChI                1.03  
"InChI=1S/C32H49NO4/c1-21(8-6-14-30(3,4)36)25-12-13-26-23(9-7-15-31(25,26)5)10-11-24-18-27(34)29(28(35)22(24)2)37-20-32(19-33)16-17-32/h10-11,21,25-29,34-36H,2,6-9,12-18,20H2,1,3-5H3/b23-10+,24-11-/t21-,25-,26+,27-,28-,29+,31-/m1/s1" 
3AJ InChIKey         InChI                1.03  XRVHRGHHDVJYGR-IPBGMLIISA-N 
3AJ SMILES_CANONICAL CACTVS               3.385 "C[C@H](CCCC(C)(C)O)[C@H]1CC[C@H]2C(\CCC[C@]12C)=C\C=C3\C[C@@H](O)[C@H](OCC4(CC4)C#N)[C@H](O)C3=C" 
3AJ SMILES           CACTVS               3.385 "C[CH](CCCC(C)(C)O)[CH]1CC[CH]2C(CCC[C]12C)=CC=C3C[CH](O)[CH](OCC4(CC4)C#N)[CH](O)C3=C" 
3AJ SMILES_CANONICAL "OpenEye OEToolkits" 1.7.6 "C[C@H](CCCC(C)(C)O)[C@H]1CC[C@@H]\2[C@@]1(CCC/C2=C\C=C/3\C[C@H]([C@@H]([C@@H](C3=C)O)OCC4(CC4)C#N)O)C" 
3AJ SMILES           "OpenEye OEToolkits" 1.7.6 "CC(CCCC(C)(C)O)C1CCC2C1(CCCC2=CC=C3CC(C(C(C3=C)O)OCC4(CC4)C#N)O)C" 
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
3AJ "SYSTEMATIC NAME" ACDLabs              12.01 "1-({[(1R,2S,3R,5Z,7E,14beta,17alpha)-1,3,25-trihydroxy-9,10-secocholesta-5,7,10-trien-2-yl]oxy}methyl)cyclopropanecarbonitrile" 
3AJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.6 
"1-[[(1S,2R,4Z,6R)-4-[(2E)-2-[(1R,3aS,7aR)-7a-methyl-1-[(2R)-6-methyl-6-oxidanyl-heptan-2-yl]-2,3,3a,5,6,7-hexahydro-1H-inden-4-ylidene]ethylidene]-3-methylidene-2,6-bis(oxidanyl)cyclohexyl]oxymethyl]cyclopropane-1-carbonitrile" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
3AJ "Create component" 2014-07-16 PDBJ 
3AJ "Initial release"  2014-12-31 RCSB 
# 
