data_0ZJ
# 
_chem_comp.id                                    0ZJ 
_chem_comp.name                                  "N-(sulfanylacetyl)-D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide" 
_chem_comp.type                                  peptide-like 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C23 H36 Cl N6 O4 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "ATA-FPR-CH2Cl; ATA-PPACK" 
_chem_comp.pdbx_formal_charge                    1 
_chem_comp.pdbx_initial_date                     2008-08-05 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        528.088 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     0ZJ 
_chem_comp.pdbx_model_coordinates_details        "not provided" 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        1NU9 
_chem_comp.pdbx_subcomponent_list                "MCR DPN PRO AR7 0QE" 
_chem_comp.pdbx_processing_site                  RCSB 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
0ZJ C1   C1   C  0 1 N N N N N N 19.961 52.939 43.501 3.162  1.916  1.118  C1   MCR 1  
0ZJ O2   O2   O  0 1 N N N N N N 19.118 52.279 42.893 2.720  2.455  0.126  O2   MCR 2  
0ZJ C2   C2   C  0 1 N N N N N N 20.813 52.247 44.550 3.439  2.728  2.357  C2   MCR 3  
0ZJ S2   S2   S  0 1 N N N N N N 22.529 52.193 43.938 3.011  4.464  2.049  S2   MCR 4  
0ZJ N    N    N  0 1 N N N N N N 20.165 54.279 43.307 3.400  0.589  1.115  N    DPN 5  
0ZJ CA   CA   C  0 1 N N R N N N 19.362 55.028 42.356 3.125  -0.202 -0.087 CA   DPN 6  
0ZJ C    C    C  0 1 N N N N N N 18.328 55.744 43.231 1.663  -0.094 -0.436 C    DPN 7  
0ZJ O    O    O  0 1 N N N N N N 18.694 56.468 44.143 1.003  0.827  -0.003 O    DPN 8  
0ZJ CB   CB   C  0 1 N N N N N N 20.243 56.035 41.580 3.967  0.328  -1.250 CB   DPN 9  
0ZJ CG   CG   C  0 1 Y N N N N N 19.418 56.825 40.547 5.428  0.108  -0.953 CG   DPN 10 
0ZJ CD1  CD1  C  0 1 Y N N N N N 18.931 56.172 39.379 6.043  -1.066 -1.345 CD1  DPN 11 
0ZJ CD2  CD2  C  0 1 Y N N N N N 19.147 58.217 40.741 6.154  1.082  -0.294 CD2  DPN 12 
0ZJ CE1  CE1  C  0 1 Y N N N N N 18.179 56.898 38.415 7.384  -1.269 -1.073 CE1  DPN 13 
0ZJ CE2  CE2  C  0 1 Y N N N N N 18.398 58.939 39.779 7.494  0.880  -0.022 CE2  DPN 14 
0ZJ CZ   CZ   C  0 1 Y N N N N N 17.913 58.279 38.613 8.108  -0.297 -0.409 CZ   DPN 15 
0ZJ N1   N1   N  0 1 N N N N N N 17.025 55.555 42.962 1.089  -1.020 -1.230 N    PRO 16 
0ZJ CA1  CA1  C  0 1 N N S N N N 16.048 56.233 43.827 -0.320 -1.036 -1.647 CA   PRO 17 
0ZJ C3   C3   C  0 1 N N N N N N 16.016 55.611 45.233 -1.213 -1.107 -0.435 C    PRO 18 
0ZJ O1   O1   O  0 1 N N N N N N 16.257 54.410 45.393 -0.727 -1.141 0.675  O    PRO 19 
0ZJ CB1  CB1  C  0 1 N N N N N N 14.713 56.045 43.083 -0.525 -2.290 -2.523 CB   PRO 20 
0ZJ CG1  CG1  C  0 1 N N N N N N 14.958 54.935 42.121 0.643  -3.213 -2.086 CG   PRO 21 
0ZJ CD   CD   C  0 1 N N N N N N 16.395 55.102 41.709 1.773  -2.181 -1.827 CD   PRO 22 
0ZJ N2   N2   N  0 1 N N N N N N 15.701 56.406 46.255 -2.552 -1.132 -0.585 N    AR7 23 
0ZJ CA2  CA2  C  0 1 N N S N N N 15.679 55.866 47.615 -3.420 -1.201 0.593  CA   AR7 24 
0ZJ C4   C4   C  0 1 N N S N N N 14.285 55.834 48.181 -3.587 -2.661 1.019  C    AR7 25 
0ZJ CB2  CB2  C  0 1 N N N N N N 16.600 56.678 48.539 -4.790 -0.609 0.253  CB   AR7 26 
0ZJ CG2  CG2  C  0 1 N N N N N N 18.078 56.393 48.306 -4.639 0.883  -0.052 CG   AR7 27 
0ZJ CD3  CD3  C  0 1 N N N N N N 19.002 57.320 49.097 -6.008 1.475  -0.392 CD   AR7 28 
0ZJ NE   NE   N  0 1 N N N N N N 20.368 56.824 49.014 -5.863 2.903  -0.684 NE   AR7 29 
0ZJ CZ1  CZ1  C  0 1 N N N N N N 21.435 57.379 49.601 -6.962 3.648  -1.016 CZ   AR7 30 
0ZJ NH1  NH1  N  1 1 N N N N N N 22.629 56.815 49.456 -8.163 3.075  -1.074 NH1  AR7 31 
0ZJ NH2  NH2  N  0 1 N N N N N N 21.326 58.488 50.330 -6.830 4.947  -1.281 NH2  AR7 32 
0ZJ O3   O3   O  0 1 N N N N N N 14.106 55.510 49.360 -4.434 -2.728 2.168  OXT  AR7 33 
0ZJ CM   CM   C  0 1 N N N N N N 13.120 55.931 47.182 -2.218 -3.253 1.359  C1   0QE 34 
0ZJ CL   CL   CL 0 0 N Y N N N N 12.835 56.792 46.045 -2.396 -5.011 1.718  CL1  0QE 35 
0ZJ H21  H21  H  0 1 N N N N N N 20.770 52.805 45.497 2.839  2.347  3.183  H21  MCR 36 
0ZJ H22  H22  H  0 1 N N N N N N 20.443 51.225 44.720 4.496  2.654  2.611  H22  MCR 37 
0ZJ HS2  HS2  H  0 1 N N N N N N 23.144 51.588 44.910 3.305  5.060  3.219  HS2  MCR 38 
0ZJ H    H    H  0 1 N N N N N N 20.878 54.749 43.828 3.754  0.158  1.908  H    DPN 39 
0ZJ HA   HA   H  0 1 N N N N N N 18.890 54.392 41.592 3.378  -1.245 0.099  HA   DPN 40 
0ZJ HB2  HB2  H  0 1 N N N N N N 20.687 56.743 42.295 3.698  -0.201 -2.164 HB2  DPN 41 
0ZJ HB3  HB3  H  0 1 N N N N N N 21.035 55.482 41.054 3.779  1.394  -1.378 HB3  DPN 42 
0ZJ HD1  HD1  H  0 1 N N N N N N 19.133 55.122 39.225 5.477  -1.826 -1.864 HD1  DPN 43 
0ZJ HD2  HD2  H  0 1 N N N N N N 19.515 58.719 41.624 5.674  2.001  0.009  HD2  DPN 44 
0ZJ HE1  HE1  H  0 1 N N N N N N 17.810 56.399 37.531 7.864  -2.186 -1.379 HE1  DPN 45 
0ZJ HE2  HE2  H  0 1 N N N N N N 18.195 59.989 39.929 8.061  1.641  0.493  HE2  DPN 46 
0ZJ HZ   HZ   H  0 1 N N N N N N 17.343 58.829 37.879 9.155  -0.455 -0.196 HZ   DPN 47 
0ZJ HA1  HA1  H  0 1 N N N N N N 16.288 57.293 43.996 -0.547 -0.138 -2.222 HA   PRO 48 
0ZJ HB21 HB21 H  0 0 N N N N N N 13.905 55.787 43.784 -1.486 -2.757 -2.310 HB2  PRO 49 
0ZJ HB31 HB31 H  0 0 N N N N N N 14.423 56.966 42.556 -0.443 -2.039 -3.581 HB3  PRO 50 
0ZJ HG2  HG2  H  0 1 N N N N N N 14.792 53.956 42.594 0.391  -3.758 -1.176 HG2  PRO 51 
0ZJ HG3  HG3  H  0 1 N N N N N N 14.286 55.006 41.253 0.919  -3.899 -2.887 HG3  PRO 52 
0ZJ HD21 HD21 H  0 0 N N N N N N 16.509 55.839 40.900 2.253  -1.898 -2.764 HD2  PRO 53 
0ZJ HD3  HD3  H  0 1 N N N N N N 16.832 54.160 41.345 2.507  -2.589 -1.132 HD3  PRO 54 
0ZJ H1   H1   H  0 1 N N N N N N 15.480 57.368 46.093 -2.941 -1.105 -1.473 H    AR7 55 
0ZJ HA2  HA2  H  0 1 N N N N N N 16.047 54.831 47.558 -2.971 -0.634 1.409  HA   AR7 56 
0ZJ H35  H35  H  0 1 N N N N N N 14.149 56.846 48.589 -4.036 -3.228 0.203  HF   AR7 57 
0ZJ HB22 HB22 H  0 0 N N N N N N 16.421 57.747 48.353 -5.199 -1.118 -0.619 HB1  AR7 58 
0ZJ HB32 HB32 H  0 0 N N N N N N 16.358 56.421 49.581 -5.463 -0.740 1.100  HB2  AR7 59 
0ZJ HG21 HG21 H  0 0 N N N N N N 18.282 55.357 48.615 -4.229 1.393  0.820  HG1  AR7 60 
0ZJ HG31 HG31 H  0 0 N N N N N N 18.290 56.527 47.235 -3.966 1.014  -0.899 HG2  AR7 61 
0ZJ HD22 HD22 H  0 0 N N N N N N 18.953 58.335 48.675 -6.418 0.966  -1.264 HD1  AR7 62 
0ZJ HD31 HD31 H  0 0 N N N N N N 18.684 57.346 50.150 -6.681 1.344  0.456  HD2  AR7 63 
0ZJ HE   HE   H  0 1 N N N N N N 20.522 55.998 48.472 -4.989 3.321  -0.642 HNE  AR7 64 
0ZJ HH1  HH1  H  0 1 N N N N N N 23.431 57.223 49.892 -8.258 2.129  -0.880 HN11 AR7 65 
0ZJ HH21 HH21 H  0 0 N N N N N N 22.137 58.886 50.760 -5.956 5.364  -1.239 HN21 AR7 66 
0ZJ HH22 HH22 H  0 0 N N N N N N 20.433 58.923 50.448 -7.609 5.475  -1.517 HN22 AR7 67 
0ZJ H36  H36  H  0 1 N N N N N N 13.178 55.540 49.560 -4.096 -2.244 2.934  HXT  AR7 68 
0ZJ H34  H34  H  0 1 N N N N N N 22.726 55.982 48.911 -8.941 3.603  -1.309 HN12 AR7 69 
0ZJ HM1  HM1  H  0 1 N N N N N N 13.134 54.934 46.716 -1.545 -3.122 0.512  H    0QE 70 
0ZJ HM2  HM2  H  0 1 N N N N N N 12.267 56.137 47.845 -1.808 -2.743 2.231  HA   0QE 71 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
0ZJ C1  O2   DOUB N N 1  
0ZJ C1  C2   SING N N 2  
0ZJ C1  N    SING N N 3  
0ZJ C2  S2   SING N N 4  
0ZJ C2  H21  SING N N 5  
0ZJ C2  H22  SING N N 6  
0ZJ S2  HS2  SING N N 7  
0ZJ N   CA   SING N N 8  
0ZJ N   H    SING N N 9  
0ZJ CA  C    SING N N 10 
0ZJ CA  CB   SING N N 11 
0ZJ CA  HA   SING N N 12 
0ZJ C   O    DOUB N N 13 
0ZJ C   N1   SING N N 14 
0ZJ CB  CG   SING N N 15 
0ZJ CB  HB2  SING N N 16 
0ZJ CB  HB3  SING N N 17 
0ZJ CG  CD1  DOUB Y N 18 
0ZJ CG  CD2  SING Y N 19 
0ZJ CD1 CE1  SING Y N 20 
0ZJ CD1 HD1  SING N N 21 
0ZJ CD2 CE2  DOUB Y N 22 
0ZJ CD2 HD2  SING N N 23 
0ZJ CE1 CZ   DOUB Y N 24 
0ZJ CE1 HE1  SING N N 25 
0ZJ CE2 CZ   SING Y N 26 
0ZJ CE2 HE2  SING N N 27 
0ZJ CZ  HZ   SING N N 28 
0ZJ N1  CA1  SING N N 29 
0ZJ N1  CD   SING N N 30 
0ZJ CA1 C3   SING N N 31 
0ZJ CA1 CB1  SING N N 32 
0ZJ CA1 HA1  SING N N 33 
0ZJ C3  O1   DOUB N N 34 
0ZJ C3  N2   SING N N 35 
0ZJ CB1 CG1  SING N N 36 
0ZJ CB1 HB21 SING N N 37 
0ZJ CB1 HB31 SING N N 38 
0ZJ CG1 CD   SING N N 39 
0ZJ CG1 HG2  SING N N 40 
0ZJ CG1 HG3  SING N N 41 
0ZJ CD  HD21 SING N N 42 
0ZJ CD  HD3  SING N N 43 
0ZJ N2  CA2  SING N N 44 
0ZJ N2  H1   SING N N 45 
0ZJ CA2 CB2  SING N N 46 
0ZJ CA2 C4   SING N N 47 
0ZJ CA2 HA2  SING N N 48 
0ZJ CB2 CG2  SING N N 49 
0ZJ CB2 HB22 SING N N 50 
0ZJ CB2 HB32 SING N N 51 
0ZJ CG2 CD3  SING N N 52 
0ZJ CG2 HG21 SING N N 53 
0ZJ CG2 HG31 SING N N 54 
0ZJ CD3 NE   SING N N 55 
0ZJ CD3 HD22 SING N N 56 
0ZJ CD3 HD31 SING N N 57 
0ZJ NE  CZ1  SING N N 58 
0ZJ NE  HE   SING N N 59 
0ZJ CZ1 NH1  DOUB N N 60 
0ZJ CZ1 NH2  SING N N 61 
0ZJ NH1 HH1  SING N N 62 
0ZJ NH1 H34  SING N N 63 
0ZJ NH2 HH21 SING N N 64 
0ZJ NH2 HH22 SING N N 65 
0ZJ C4  O3   SING N N 66 
0ZJ C4  CM   SING N N 67 
0ZJ CM  HM1  SING N N 68 
0ZJ CM  HM2  SING N N 69 
0ZJ CL  CM   SING N N 70 
0ZJ C4  H35  SING N N 71 
0ZJ O3  H36  SING N N 72 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
0ZJ SMILES           ACDLabs              12.01 "O=C(NC(CCCNC(=[NH2+])\\N)C(O)CCl)C2N(C(=O)C(NC(=O)CS)Cc1ccccc1)CCC2"                                                                                                                                                       
0ZJ InChI            InChI                1.03  "InChI=1S/C23H35ClN6O4S/c24-13-19(31)16(8-4-10-27-23(25)26)29-21(33)18-9-5-11-30(18)22(34)17(28-20(32)14-35)12-15-6-2-1-3-7-15/h1-3,6-7,16-19,31,35H,4-5,8-14H2,(H,28,32)(H,29,33)(H4,25,26,27)/p+1/t16-,17+,18-,19+/m0/s1" 
0ZJ InChIKey         InChI                1.03  AZCCJYZROBVYNQ-ZSYWTGECSA-O                                                                                                                                                                                                 
0ZJ SMILES_CANONICAL CACTVS               3.385 "NC(=[NH2+])NCCC[C@H](NC(=O)[C@@H]1CCCN1C(=O)[C@@H](Cc2ccccc2)NC(=O)CS)[C@H](O)CCl"                                                                                                                                         
0ZJ SMILES           CACTVS               3.385 "NC(=[NH2+])NCCC[CH](NC(=O)[CH]1CCCN1C(=O)[CH](Cc2ccccc2)NC(=O)CS)[CH](O)CCl"                                                                                                                                               
0ZJ SMILES_CANONICAL "OpenEye OEToolkits" 1.7.5 "c1ccc(cc1)C[C@H](C(=O)N2CCC[C@H]2C(=O)N[C@@H](CCCNC(=[NH2+])N)C(CCl)O)NC(=O)CS"                                                                                                                                            
0ZJ SMILES           "OpenEye OEToolkits" 1.7.5 "c1ccc(cc1)CC(C(=O)N2CCCC2C(=O)NC(CCCNC(=[NH2+])N)C(CCl)O)NC(=O)CS"                                                                                                                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
0ZJ "SYSTEMATIC NAME" ACDLabs              12.01 "N-(sulfanylacetyl)-D-phenylalanyl-N-[(2S,3S)-6-{[amino(iminio)methyl]amino}-1-chloro-2-hydroxyhexan-3-yl]-L-prolinamide"                                        
0ZJ "SYSTEMATIC NAME" "OpenEye OEToolkits" 1.7.0 "[azanyl-[[(4S)-6-chloro-5-hydroxy-4-[[(2S)-1-[(2R)-3-phenyl-2-(2-sulfanylethanoylamino)propanoyl]pyrrolidin-2-yl]carbonylamino]hexyl]amino]methylidene]azanium" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
0ZJ "Create component"   2008-08-05 RCSB 
0ZJ "Other modification" 2011-01-12 RCSB 
0ZJ "Modify descriptor"  2011-06-04 RCSB 
0ZJ "Modify descriptor"  2012-01-05 RCSB 
0ZJ "Modify synonyms"    2020-05-26 PDBE 
0ZJ "Modify PCM"         2024-09-27 PDBE 
# 
loop_
_pdbx_chem_comp_synonyms.ordinal 
_pdbx_chem_comp_synonyms.comp_id 
_pdbx_chem_comp_synonyms.name 
_pdbx_chem_comp_synonyms.provenance 
_pdbx_chem_comp_synonyms.type 
1 0ZJ ATA-FPR-CH2Cl ? ? 
2 0ZJ ATA-PPACK     ? ? 
# 
_pdbx_chem_comp_pcm.pcm_id                             1 
_pdbx_chem_comp_pcm.comp_id                            0ZJ 
_pdbx_chem_comp_pcm.modified_residue_id                SER 
_pdbx_chem_comp_pcm.type                               None 
_pdbx_chem_comp_pcm.category                           "Covalent chemical modification" 
_pdbx_chem_comp_pcm.position                           "Amino-acid side chain" 
_pdbx_chem_comp_pcm.polypeptide_position               "Any position" 
_pdbx_chem_comp_pcm.comp_id_linking_atom               C4 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom   OG 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession     ? 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession      ? 
# 
