data_Y2I
# 
_chem_comp.id                                    Y2I 
_chem_comp.name                                  "N-{(1R)-1-[(3P,5P)-3-(1-cyclopropyl-1H-pyrazol-4-yl)-5-(1-methyl-1H-pyrazol-4-yl)phenyl]ethyl}-5-[2-(dimethylamino)ethoxy]-2-methylbenzamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C30 H36 N6 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-11-14 
_chem_comp.pdbx_modified_date                    2024-03-29 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        512.646 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     Y2I 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8UUV 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
Y2I C1   C1  C 0 1 N N N N N N 47.035 32.655 1.163  -3.866 4.942  0.306  C1   Y2I 1  
Y2I C7   C2  C 0 1 N N N N N N 51.199 29.062 2.266  0.366  2.714  -2.729 C7   Y2I 2  
Y2I C8   C3  C 0 1 Y N N N N N 51.582 29.170 -0.229 1.303  1.330  -0.897 C8   Y2I 3  
Y2I C9   C4  C 0 1 Y N N N N N 52.916 29.557 -0.188 2.543  1.641  -0.375 C9   Y2I 4  
Y2I C10  C5  C 0 1 Y N N N N N 53.786 29.248 -1.229 3.446  0.626  -0.064 C10  Y2I 5  
Y2I C11  C6  C 0 1 Y N N N N N 55.194 29.700 -1.179 4.779  0.962  0.497  C11  Y2I 6  
Y2I C12  C7  C 0 1 Y N N N N N 55.698 30.780 -0.488 5.754  0.074  0.845  C12  Y2I 7  
Y2I C19  C8  C 0 1 Y N N N N N 53.317 28.541 -2.332 3.096  -0.703 -0.281 C19  Y2I 8  
Y2I C20  C9  C 0 1 Y N N N N N 51.984 28.148 -2.389 1.845  -1.011 -0.807 C20  Y2I 9  
Y2I C21  C10 C 0 1 Y N N N N N 51.471 27.428 -3.578 1.465  -2.427 -1.040 C21  Y2I 10 
Y2I C24  C11 C 0 1 N N N N N N 49.045 25.701 -5.632 1.979  -6.003 -1.029 C24  Y2I 11 
Y2I N25  N1  N 0 1 Y N N N N N 51.352 26.480 -5.632 0.285  -4.189 -1.622 N25  Y2I 12 
Y2I C26  C12 C 0 1 Y N N N N N 52.135 27.120 -4.778 0.243  -2.884 -1.570 C26  Y2I 13 
Y2I C27  C13 C 0 1 Y N N N N N 51.126 28.465 -1.338 0.951  0.012  -1.114 C27  Y2I 14 
Y2I C35  C14 C 0 1 N N N N N N 54.360 38.925 0.014  -6.400 -2.730 2.724  C35  Y2I 15 
Y2I C36  C15 C 0 1 N N N N N N 54.365 36.952 -1.432 -6.002 -4.483 1.102  C36  Y2I 16 
Y2I C2   C16 C 0 1 Y N N N N N 48.179 33.541 0.743  -4.251 3.486  0.251  C2   Y2I 17 
Y2I C3   C17 C 0 1 Y N N N N N 49.385 33.025 0.236  -3.320 2.533  -0.167 C3   Y2I 18 
Y2I C4   C18 C 0 1 N N N N N N 49.579 31.549 0.079  -1.956 2.949  -0.557 C4   Y2I 19 
Y2I C6   C19 C 0 1 N N R N N N 50.648 29.511 0.918  0.329  2.432  -1.225 C6   Y2I 20 
Y2I C14  C20 C 0 1 N N N N N N 57.961 31.793 -0.168 8.069  0.224  1.795  C14  Y2I 21 
Y2I C15  C21 C 0 1 N N N N N N 58.773 32.678 -1.052 9.148  -0.084 0.755  C15  Y2I 22 
Y2I C16  C22 C 0 1 N N N N N N 59.438 31.603 -0.260 8.387  -1.227 1.430  C16  Y2I 23 
Y2I C18  C23 C 0 1 Y N N N N N 56.328 29.129 -1.785 5.268  2.256  0.763  C18  Y2I 24 
Y2I C22  C24 C 0 1 Y N N N N N 50.206 26.920 -3.768 2.238  -3.522 -0.786 C22  Y2I 25 
Y2I C29  C25 C 0 1 Y N N N N N 50.414 33.890 -0.144 -3.682 1.186  -0.215 C29  Y2I 26 
Y2I C30  C26 C 0 1 Y N N N N N 50.254 35.261 -0.025 -4.961 0.804  0.151  C30  Y2I 27 
Y2I C32  C27 C 0 1 N N N N N N 51.104 37.495 -0.263 -6.654 -0.830 0.498  C32  Y2I 28 
Y2I C33  C28 C 0 1 N N N N N N 52.246 38.134 -0.983 -6.868 -2.340 0.381  C33  Y2I 29 
Y2I C37  C29 C 0 1 Y N N N N N 49.073 35.782 0.472  -5.880 1.759  0.566  C37  Y2I 30 
Y2I C38  C30 C 0 1 Y N N N N N 48.056 34.925 0.848  -5.521 3.093  0.620  C38  Y2I 31 
Y2I N13  N2  N 0 1 Y N N N N N 57.024 30.804 -0.700 6.803  0.781  1.311  N13  Y2I 32 
Y2I N17  N3  N 0 1 Y N N N N N 57.440 29.792 -1.500 6.475  2.141  1.250  N17  Y2I 33 
Y2I N23  N4  N 0 1 Y N N N N N 50.168 26.368 -4.989 1.528  -4.613 -1.136 N23  Y2I 34 
Y2I N34  N5  N 0 1 N N N N N N 53.583 37.742 -0.443 -6.002 -3.033 1.343  N34  Y2I 35 
Y2I N5   N6  N 0 1 N N N N N N 50.381 30.950 0.968  -1.023 2.019  -0.839 N5   Y2I 36 
Y2I O28  O1  O 0 1 N N N N N N 49.025 30.931 -0.826 -1.677 4.130  -0.622 O28  Y2I 37 
Y2I O31  O2  O 0 1 N N N N N N 51.281 36.080 -0.416 -5.318 -0.506 0.105  O31  Y2I 38 
Y2I H1B  H1  H 0 1 N N N N N N 47.141 32.398 2.227  -3.972 5.383  -0.685 H1B  Y2I 39 
Y2I H1A  H2  H 0 1 N N N N N N 46.084 33.185 1.007  -4.517 5.464  1.008  H1A  Y2I 40 
Y2I H1C  H3  H 0 1 N N N N N N 47.044 31.734 0.561  -2.831 5.032  0.634  H1C  Y2I 41 
Y2I H7A  H4  H 0 1 N N N N N N 51.403 27.981 2.238  1.372  3.021  -3.016 H7A  Y2I 42 
Y2I H7C  H5  H 0 1 N N N N N N 52.131 29.605 2.480  0.092  1.812  -3.275 H7C  Y2I 43 
Y2I H7B  H6  H 0 1 N N N N N N 50.461 29.275 3.053  -0.339 3.511  -2.966 H7B  Y2I 44 
Y2I H9   H7  H 0 1 N N N N N N 53.284 30.107 0.666  2.814  2.673  -0.208 H9   Y2I 45 
Y2I H12  H8  H 0 1 N N N N N N 55.132 31.477 0.112  5.697  -1.002 0.762  H12  Y2I 46 
Y2I H19  H9  H 0 1 N N N N N N 53.987 28.298 -3.143 3.793  -1.493 -0.042 H19  Y2I 47 
Y2I H24A H10 H 0 0 N N N N N N 49.347 25.355 -6.632 1.704  -6.400 -0.052 H24A Y2I 48 
Y2I H24B H11 H 0 0 N N N N N N 48.734 24.838 -5.024 1.507  -6.599 -1.809 H24B Y2I 49 
Y2I H24C H12 H 0 0 N N N N N N 48.205 26.405 -5.726 3.062  -6.043 -1.145 H24C Y2I 50 
Y2I H26  H13 H 0 1 N N N N N N 53.165 27.376 -4.980 -0.586 -2.264 -1.879 H26  Y2I 51 
Y2I H27  H14 H 0 1 N N N N N N 50.091 28.159 -1.385 -0.021 -0.226 -1.522 H27  Y2I 52 
Y2I H35A H15 H 0 0 N N N N N N 55.335 38.596 0.403  -7.429 -3.052 2.885  H35A Y2I 53 
Y2I H35C H16 H 0 0 N N N N N N 54.516 39.610 -0.832 -5.742 -3.256 3.416  H35C Y2I 54 
Y2I H35B H17 H 0 0 N N N N N N 53.804 39.444 0.809  -6.324 -1.656 2.896  H35B Y2I 55 
Y2I H36A H18 H 0 0 N N N N N N 55.340 36.683 -0.999 -5.636 -4.683 0.095  H36A Y2I 56 
Y2I H36C H19 H 0 0 N N N N N N 53.813 36.036 -1.688 -5.352 -4.972 1.828  H36C Y2I 57 
Y2I H36B H20 H 0 0 N N N N N N 54.521 37.553 -2.340 -7.016 -4.868 1.204  H36B Y2I 58 
Y2I H6   H21 H 0 1 N N N N N N 49.698 28.983 0.749  0.603  3.334  -0.679 H6   Y2I 59 
Y2I H14  H22 H 0 1 N N N N N N 57.631 32.276 0.764  8.397  0.581  2.771  H14  Y2I 60 
Y2I H15B H23 H 0 0 N N N N N N 58.693 32.586 -2.145 8.917  0.128  -0.289 H15B Y2I 61 
Y2I H15A H24 H 0 0 N N N N N N 58.925 33.734 -0.783 10.187 0.071  1.047  H15A Y2I 62 
Y2I H16B H25 H 0 0 N N N N N N 59.848 30.718 -0.769 8.925  -1.825 2.166  H16B Y2I 63 
Y2I H16A H26 H 0 0 N N N N N N 60.081 31.866 0.593  7.655  -1.768 0.830  H16A Y2I 64 
Y2I H18  H27 H 0 1 N N N N N N 56.296 28.250 -2.412 4.738  3.181  0.592  H18  Y2I 65 
Y2I H22  H28 H 0 1 N N N N N N 49.391 26.959 -3.061 3.239  -3.516 -0.379 H22  Y2I 66 
Y2I H29  H29 H 0 1 N N N N N N 51.338 33.488 -0.532 -2.967 0.445  -0.539 H29  Y2I 67 
Y2I H32B H30 H 0 0 N N N N N N 50.148 37.811 -0.707 -7.359 -0.311 -0.152 H32B Y2I 68 
Y2I H32A H31 H 0 0 N N N N N N 51.122 37.769 0.802  -6.814 -0.518 1.530  H32A Y2I 69 
Y2I H33B H32 H 0 0 N N N N N N 52.198 37.841 -2.042 -7.911 -2.576 0.594  H33B Y2I 70 
Y2I H33A H33 H 0 0 N N N N N N 52.143 39.226 -0.900 -6.622 -2.665 -0.630 H33A Y2I 71 
Y2I H37  H34 H 0 1 N N N N N N 48.947 36.850 0.566  -6.877 1.458  0.852  H37  Y2I 72 
Y2I H38  H35 H 0 1 N N N N N N 47.138 35.341 1.235  -6.240 3.831  0.944  H38  Y2I 73 
Y2I H5   H37 H 0 1 N N N N N N 50.809 31.500 1.685  -1.246 1.077  -0.787 H5   Y2I 74 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
Y2I C1  C2   SING N N 1  
Y2I C2  C3   DOUB Y N 2  
Y2I C3  C4   SING N N 3  
Y2I C4  N5   SING N N 4  
Y2I N5  C6   SING N N 5  
Y2I C6  C7   SING N N 6  
Y2I C6  C8   SING N N 7  
Y2I C8  C9   DOUB Y N 8  
Y2I C9  C10  SING Y N 9  
Y2I C10 C11  SING N N 10 
Y2I C11 C12  DOUB Y N 11 
Y2I C12 N13  SING Y N 12 
Y2I N13 C14  SING N N 13 
Y2I C14 C15  SING N N 14 
Y2I C15 C16  SING N N 15 
Y2I N13 N17  SING Y N 16 
Y2I N17 C18  DOUB Y N 17 
Y2I C10 C19  DOUB Y N 18 
Y2I C19 C20  SING Y N 19 
Y2I C20 C21  SING N N 20 
Y2I C21 C22  DOUB Y N 21 
Y2I C22 N23  SING Y N 22 
Y2I N23 C24  SING N N 23 
Y2I N23 N25  SING Y N 24 
Y2I N25 C26  DOUB Y N 25 
Y2I C20 C27  DOUB Y N 26 
Y2I C4  O28  DOUB N N 27 
Y2I C3  C29  SING Y N 28 
Y2I C29 C30  DOUB Y N 29 
Y2I C30 O31  SING N N 30 
Y2I O31 C32  SING N N 31 
Y2I C32 C33  SING N N 32 
Y2I C33 N34  SING N N 33 
Y2I N34 C35  SING N N 34 
Y2I N34 C36  SING N N 35 
Y2I C30 C37  SING Y N 36 
Y2I C37 C38  DOUB Y N 37 
Y2I C38 C2   SING Y N 38 
Y2I C27 C8   SING Y N 39 
Y2I C18 C11  SING Y N 40 
Y2I C16 C14  SING N N 41 
Y2I C26 C21  SING Y N 42 
Y2I C1  H1B  SING N N 43 
Y2I C1  H1A  SING N N 44 
Y2I C1  H1C  SING N N 45 
Y2I C7  H7A  SING N N 46 
Y2I C7  H7C  SING N N 47 
Y2I C7  H7B  SING N N 48 
Y2I C9  H9   SING N N 49 
Y2I C12 H12  SING N N 50 
Y2I C19 H19  SING N N 51 
Y2I C24 H24A SING N N 52 
Y2I C24 H24B SING N N 53 
Y2I C24 H24C SING N N 54 
Y2I C26 H26  SING N N 55 
Y2I C27 H27  SING N N 56 
Y2I C35 H35A SING N N 57 
Y2I C35 H35C SING N N 58 
Y2I C35 H35B SING N N 59 
Y2I C36 H36A SING N N 60 
Y2I C36 H36C SING N N 61 
Y2I C36 H36B SING N N 62 
Y2I C6  H6   SING N N 63 
Y2I C14 H14  SING N N 64 
Y2I C15 H15B SING N N 65 
Y2I C15 H15A SING N N 66 
Y2I C16 H16B SING N N 67 
Y2I C16 H16A SING N N 68 
Y2I C18 H18  SING N N 69 
Y2I C22 H22  SING N N 70 
Y2I C29 H29  SING N N 71 
Y2I C32 H32B SING N N 72 
Y2I C32 H32A SING N N 73 
Y2I C33 H33B SING N N 74 
Y2I C33 H33A SING N N 75 
Y2I C37 H37  SING N N 76 
Y2I C38 H38  SING N N 77 
Y2I N5  H5   SING N N 78 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
Y2I SMILES           ACDLabs              12.01 "CN(C)CCOc1cc(c(C)cc1)C(=O)NC(C)c1cc(cc(c1)c1cn(nc1)C1CC1)c1cn(C)nc1"                                                                                                                        
Y2I InChI            InChI                1.06  "InChI=1S/C30H36N6O2/c1-20-6-9-28(38-11-10-34(3)4)15-29(20)30(37)33-21(2)22-12-23(25-16-31-35(5)18-25)14-24(13-22)26-17-32-36(19-26)27-7-8-27/h6,9,12-19,21,27H,7-8,10-11H2,1-5H3,(H,33,37)" 
Y2I InChIKey         InChI                1.06  IVASDCDNDJPYPH-UHFFFAOYSA-N                                                                                                                                                                  
Y2I SMILES_CANONICAL CACTVS               3.385 "C[C@@H](NC(=O)c1cc(OCCN(C)C)ccc1C)c2cc(cc(c2)c3cnn(c3)C4CC4)c5cnn(C)c5"                                                                                                                     
Y2I SMILES           CACTVS               3.385 "C[CH](NC(=O)c1cc(OCCN(C)C)ccc1C)c2cc(cc(c2)c3cnn(c3)C4CC4)c5cnn(C)c5"                                                                                                                       
Y2I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1C(=O)N[C@H](C)c2cc(cc(c2)c3cnn(c3)C4CC4)c5cnn(c5)C)OCCN(C)C"                                                                                                                      
Y2I SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1ccc(cc1C(=O)NC(C)c2cc(cc(c2)c3cnn(c3)C4CC4)c5cnn(c5)C)OCCN(C)C"                                                                                                                          
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
Y2I "SYSTEMATIC NAME" ACDLabs              12.01 "N-{(1R)-1-[(3P,5P)-3-(1-cyclopropyl-1H-pyrazol-4-yl)-5-(1-methyl-1H-pyrazol-4-yl)phenyl]ethyl}-5-[2-(dimethylamino)ethoxy]-2-methylbenzamide" 
Y2I "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "~{N}-[(1~{R})-1-[3-(1-cyclopropylpyrazol-4-yl)-5-(1-methylpyrazol-4-yl)phenyl]ethyl]-5-[2-(dimethylamino)ethoxy]-2-methyl-benzamide"          
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
Y2I "Create component" 2023-11-14 RCSB 
Y2I "Initial release"  2024-04-03 RCSB 
# 
