data_W8I
# 
_chem_comp.id                                    W8I 
_chem_comp.name                                  "1-{6-[(2,3-dichlorophenyl)sulfanyl]pyrido[2,3-b]pyrazin-2-yl}-4-methylpiperidin-4-amine" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H19 Cl2 N5 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-09-27 
_chem_comp.pdbx_modified_date                    2023-12-29 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        420.359 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     W8I 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8U7W 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
W8I C18 C1  C  0 1 N N N N N N 14.090 -24.825 22.927 8.257  -1.078 -0.235 C18 W8I 1  
W8I N4  N1  N  0 1 Y N N N N N 18.320 -22.445 25.836 2.291  0.960  -0.449 N4  W8I 2  
W8I C14 C2  C  0 1 N N N N N N 15.276 -23.849 24.984 5.996  -1.673 0.651  C14 W8I 3  
W8I C13 C3  C  0 1 N N N N N N 16.094 -22.751 24.282 4.585  -1.145 0.920  C13 W8I 4  
W8I C17 C4  C  0 1 N N N N N N 17.290 -24.422 22.915 4.795  0.488  -0.858 C17 W8I 5  
W8I C16 C5  C  0 1 N N N N N N 16.451 -25.584 23.490 6.213  0.008  -1.181 C16 W8I 6  
W8I C15 C6  C  0 1 N N N N N N 15.109 -25.099 24.056 6.862  -0.540 0.093  C15 W8I 7  
W8I N3  N2  N  0 1 Y N N N N N 20.405 -24.290 25.749 0.501  -0.871 0.529  N3  W8I 8  
W8I C8  C7  C  0 1 Y N N N N N 20.211 -21.554 28.823 -0.747 2.910  -0.389 C8  W8I 9  
W8I C22 C8  C  0 1 Y N N N N N 25.439 -22.608 27.203 -4.733 -0.793 2.459  C22 W8I 10 
W8I C7  C9  C  0 1 Y N N N N N 19.209 -21.512 27.839 0.567  2.612  -0.587 C7  W8I 11 
W8I C5  C10 C  0 1 Y N N N N N 18.392 -23.348 24.836 2.680  -0.265 -0.148 C5  W8I 12 
W8I C6  C11 C  0 1 Y N N N N N 19.449 -24.277 24.795 1.759  -1.200 0.352  C6  W8I 13 
W8I C1  C12 C  0 1 Y N N N N N 20.340 -23.388 26.758 0.085  0.367  0.230  C1  W8I 14 
W8I C20 C13 C  0 1 Y N N N N N 23.978 -22.869 29.147 -3.944 0.747  0.797  C20 W8I 15 
W8I C21 C14 C  0 1 Y N N N N N 24.227 -22.333 27.869 -4.238 0.452  2.122  C21 W8I 16 
W8I C2  C15 C  0 1 Y N N N N N 19.278 -22.456 26.791 1.013  1.310  -0.275 C2  W8I 17 
W8I C23 C16 C  0 1 Y N N N N N 26.400 -23.439 27.820 -4.936 -1.747 1.479  C23 W8I 18 
W8I C24 C17 C  0 1 Y N N N N N 26.140 -23.970 29.103 -4.645 -1.458 0.157  C24 W8I 19 
W8I C25 C18 C  0 1 Y N N N N N 24.933 -23.696 29.771 -4.149 -0.214 -0.187 C25 W8I 20 
W8I C9  C19 C  0 1 Y N N N N N 21.233 -22.507 28.732 -1.617 1.931  0.115  C9  W8I 21 
W8I N10 N3  N  0 1 Y N N N N N 21.305 -23.404 27.716 -1.193 0.717  0.404  N10 W8I 22 
W8I N12 N4  N  0 1 N N N N N N 17.376 -23.304 23.857 4.007  -0.632 -0.329 N12 W8I 23 
W8I N19 N5  N  0 1 N N N N N N 14.580 -26.212 24.859 6.972  0.532  1.091  N19 W8I 24 
W8I S11 S1  S  0 1 N N N N N N 22.468 -22.531 29.983 -3.314 2.334  0.364  S11 W8I 25 
W8I CL1 CL1 CL 0 0 N N N N N N 24.664 -24.386 31.352 -3.785 0.149  -1.845 CL1 W8I 26 
W8I CL2 CL2 CL 0 0 N N N N N N 27.284 -24.981 29.889 -4.901 -2.659 -1.070 CL2 W8I 27 
W8I H1  H1  H  0 1 N N N N N N 13.141 -24.480 23.364 8.871  -0.273 -0.638 H1  W8I 28 
W8I H2  H2  H  0 1 N N N N N N 14.487 -24.050 22.255 8.719  -1.468 0.672  H2  W8I 29 
W8I H3  H3  H  0 1 N N N N N N 13.916 -25.750 22.358 8.175  -1.876 -0.973 H3  W8I 30 
W8I H4  H4  H  0 1 N N N N N N 14.282 -23.452 25.236 6.431  -2.039 1.582  H4  W8I 31 
W8I H5  H5  H  0 1 N N N N N N 15.795 -24.151 25.906 5.949  -2.486 -0.073 H5  W8I 32 
W8I H6  H6  H  0 1 N N N N N N 16.266 -21.918 24.979 3.962  -1.953 1.304  H6  W8I 33 
W8I H7  H7  H  0 1 N N N N N N 15.542 -22.386 23.404 4.632  -0.341 1.655  H7  W8I 34 
W8I H8  H8  H  0 1 N N N N N N 18.305 -24.787 22.700 4.841  1.283  -0.115 H8  W8I 35 
W8I H9  H9  H  0 1 N N N N N N 16.822 -24.070 21.984 4.325  0.866  -1.766 H9  W8I 36 
W8I H10 H10 H  0 1 N N N N N N 16.256 -26.312 22.689 6.169  -0.778 -1.934 H10 W8I 37 
W8I H11 H11 H  0 1 N N N N N N 17.022 -26.069 24.296 6.802  0.843  -1.559 H11 W8I 38 
W8I H12 H12 H  0 1 N N N N N N 20.193 -20.855 29.646 -1.118 3.898  -0.620 H12 W8I 39 
W8I H13 H13 H  0 1 N N N N N N 25.631 -22.186 26.228 -4.956 -1.023 3.490  H13 W8I 40 
W8I H14 H14 H  0 1 N N N N N N 18.413 -20.783 27.883 1.250  3.352  -0.975 H14 W8I 41 
W8I H15 H15 H  0 1 N N N N N N 19.496 -24.992 23.987 2.089  -2.199 0.594  H15 W8I 42 
W8I H16 H16 H  0 1 N N N N N N 23.485 -21.707 27.396 -4.080 1.196  2.889  H16 W8I 43 
W8I H17 H17 H  0 1 N N N N N N 27.327 -23.667 27.315 -5.323 -2.719 1.746  H17 W8I 44 
W8I H18 H18 H  0 1 N N N N N N 15.216 -26.419 25.603 7.395  0.193  1.941  H18 W8I 45 
W8I H19 H19 H  0 1 N N N N N N 13.692 -25.955 25.241 7.483  1.319  0.721  H19 W8I 46 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
W8I C17 C16 SING N N 1  
W8I C17 N12 SING N N 2  
W8I C18 C15 SING N N 3  
W8I C16 C15 SING N N 4  
W8I N12 C13 SING N N 5  
W8I N12 C5  SING N N 6  
W8I C15 N19 SING N N 7  
W8I C15 C14 SING N N 8  
W8I C13 C14 SING N N 9  
W8I C6  C5  DOUB Y N 10 
W8I C6  N3  SING Y N 11 
W8I C5  N4  SING Y N 12 
W8I N3  C1  DOUB Y N 13 
W8I N4  C2  DOUB Y N 14 
W8I C1  C2  SING Y N 15 
W8I C1  N10 SING Y N 16 
W8I C2  C7  SING Y N 17 
W8I C22 C23 DOUB Y N 18 
W8I C22 C21 SING Y N 19 
W8I N10 C9  DOUB Y N 20 
W8I C23 C24 SING Y N 21 
W8I C7  C8  DOUB Y N 22 
W8I C21 C20 DOUB Y N 23 
W8I C9  C8  SING Y N 24 
W8I C9  S11 SING N N 25 
W8I C24 C25 DOUB Y N 26 
W8I C24 CL2 SING N N 27 
W8I C20 C25 SING Y N 28 
W8I C20 S11 SING N N 29 
W8I C25 CL1 SING N N 30 
W8I C18 H1  SING N N 31 
W8I C18 H2  SING N N 32 
W8I C18 H3  SING N N 33 
W8I C14 H4  SING N N 34 
W8I C14 H5  SING N N 35 
W8I C13 H6  SING N N 36 
W8I C13 H7  SING N N 37 
W8I C17 H8  SING N N 38 
W8I C17 H9  SING N N 39 
W8I C16 H10 SING N N 40 
W8I C16 H11 SING N N 41 
W8I C8  H12 SING N N 42 
W8I C22 H13 SING N N 43 
W8I C7  H14 SING N N 44 
W8I C6  H15 SING N N 45 
W8I C21 H16 SING N N 46 
W8I C23 H17 SING N N 47 
W8I N19 H18 SING N N 48 
W8I N19 H19 SING N N 49 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
W8I SMILES           ACDLabs              12.01 "Clc1cccc(Sc2ccc3nc(cnc3n2)N2CCC(C)(N)CC2)c1Cl"                                                                                     
W8I InChI            InChI                1.06  "InChI=1S/C19H19Cl2N5S/c1-19(22)7-9-26(10-8-19)15-11-23-18-13(24-15)5-6-16(25-18)27-14-4-2-3-12(20)17(14)21/h2-6,11H,7-10,22H2,1H3" 
W8I InChIKey         InChI                1.06  ACCDLDCDCLNKCH-UHFFFAOYSA-N                                                                                                         
W8I SMILES_CANONICAL CACTVS               3.385 "CC1(N)CCN(CC1)c2cnc3nc(Sc4cccc(Cl)c4Cl)ccc3n2"                                                                                     
W8I SMILES           CACTVS               3.385 "CC1(N)CCN(CC1)c2cnc3nc(Sc4cccc(Cl)c4Cl)ccc3n2"                                                                                     
W8I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CC1(CCN(CC1)c2cnc3c(n2)ccc(n3)Sc4cccc(c4Cl)Cl)N"                                                                                   
W8I SMILES           "OpenEye OEToolkits" 2.0.7 "CC1(CCN(CC1)c2cnc3c(n2)ccc(n3)Sc4cccc(c4Cl)Cl)N"                                                                                   
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
W8I "SYSTEMATIC NAME" ACDLabs              12.01 "1-{6-[(2,3-dichlorophenyl)sulfanyl]pyrido[2,3-b]pyrazin-2-yl}-4-methylpiperidin-4-amine"      
W8I "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "1-[6-[2,3-bis(chloranyl)phenyl]sulfanylpyrido[2,3-b]pyrazin-2-yl]-4-methyl-piperidin-4-amine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
W8I "Create component" 2023-09-27 RCSB 
W8I "Initial release"  2024-01-03 RCSB 
# 
