data_TJI
# 
_chem_comp.id                                    TJI 
_chem_comp.name                                  "ethyl 3-bromanyl-2-methyl-propanoate" 
_chem_comp.type                                  "peptide linking" 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C6 H11 Br O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "Ethyl 2-(bromomethyl)acrylate (precursor)" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-01-06 
_chem_comp.pdbx_modified_date                    2024-09-27 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        195.054 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     TJI 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   Y 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8C2F 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
_chem_comp.pdbx_pcm                              Y 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
TJI C1  C1  C  0 1 N N N N N N 25.259 21.354 -0.616 5.087  -0.646 -0.314 C1  TJI 1  
TJI C2  C2  C  0 1 N N N N N N 24.251 21.843 -1.598 3.944  0.322  -0.001 C2  TJI 2  
TJI O1  O1  O  0 1 N N N N N N 23.752 20.746 -2.419 2.672  -0.346 -0.215 O1  TJI 3  
TJI C3  C3  C  0 1 N N N N N N 23.291 21.087 -3.611 1.561  0.371  0.017  C3  TJI 4  
TJI O2  O2  O  0 1 N N N N N N 23.236 22.220 -4.023 1.648  1.518  0.387  O2  TJI 5  
TJI C4  C4  C  0 1 N N R N N N 22.974 19.908 -4.493 0.206  -0.255 -0.184 C4  TJI 6  
TJI C5  C5  C  0 1 N N N N N N 21.555 19.901 -4.950 -0.883 0.768  0.147  C5  TJI 7  
TJI C6  C6  C  0 1 N N N N N N 23.497 18.570 -4.024 0.062  -1.468 0.738  C6  TJI 8  
TJI H1  H1  H  0 1 N N N N N N 25.620 22.198 -0.009 5.018  -1.514 0.342  H1  TJI 9  
TJI H2  H2  H  0 1 N N N N N N 24.797 20.602 0.040  5.016  -0.968 -1.353 H2  TJI 10 
TJI H3  H3  H  0 1 N N N N N N 26.105 20.901 -1.154 6.042  -0.145 -0.153 H3  TJI 11 
TJI H4  H4  H  0 1 N N N N N N 24.718 22.597 -2.249 4.015  0.644  1.038  H4  TJI 12 
TJI H5  H5  H  0 1 N N N N N N 23.410 22.298 -1.055 4.014  1.190  -0.656 H5  TJI 13 
TJI H6  H6  H  0 1 N N N N N N 23.547 20.106 -5.411 0.102  -0.573 -1.221 H6  TJI 14 
TJI H7  H7  H  0 1 N N N N N N 21.143 20.845 -4.563 -0.779 1.086  1.185  H7  TJI 15 
TJI H8  H8  H  0 1 N N N N N N 21.625 19.954 -6.046 -0.781 1.632  -0.509 H8  TJI 16 
TJI H10 H10 H  0 1 N N N N N N 24.546 18.676 -3.709 -0.919 -1.921 0.593  H10 TJI 17 
TJI H11 H11 H  0 1 N N N N N N 22.893 18.217 -3.175 0.838  -2.197 0.502  H11 TJI 18 
TJI H12 H12 H  0 1 N N N N N N 23.433 17.843 -4.847 0.166  -1.150 1.776  H12 TJI 19 
TJI BR1 BR1 BR 0 0 N Y N N N N ?      ?      ?      -2.652 -0.049 -0.115 BR1 TJI 20 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
TJI C5 C4  SING N N 1  
TJI C4 C6  SING N N 2  
TJI C4 C3  SING N N 3  
TJI O2 C3  DOUB N N 4  
TJI C3 O1  SING N N 5  
TJI O1 C2  SING N N 6  
TJI C2 C1  SING N N 7  
TJI C1 H1  SING N N 8  
TJI C1 H2  SING N N 9  
TJI C1 H3  SING N N 10 
TJI C2 H4  SING N N 11 
TJI C2 H5  SING N N 12 
TJI C4 H6  SING N N 13 
TJI C5 H7  SING N N 14 
TJI C5 H8  SING N N 15 
TJI C6 H10 SING N N 16 
TJI C6 H11 SING N N 17 
TJI C6 H12 SING N N 18 
TJI C5 BR1 SING N N 19 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
TJI InChI            InChI                1.06  "InChI=1S/C6H11BrO2/c1-3-9-6(8)5(2)4-7/h5H,3-4H2,1-2H3/t5-/m0/s1" 
TJI InChIKey         InChI                1.06  VTORDCJYLAYUQF-YFKPBYRVSA-N                                       
TJI SMILES_CANONICAL CACTVS               3.385 "CCOC(=O)[C@@H](C)CBr"                                            
TJI SMILES           CACTVS               3.385 "CCOC(=O)[CH](C)CBr"                                              
TJI SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "CCOC(=O)C(C)CBr"                                                 
TJI SMILES           "OpenEye OEToolkits" 2.0.7 "CCOC(=O)C(C)CBr"                                                 
# 
_pdbx_chem_comp_identifier.comp_id           TJI 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "ethyl 3-bromanyl-2-methyl-propanoate" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
TJI "Create component"         2023-01-06 PDBE 
TJI "Modify leaving atom flag" 2023-01-12 PDBE 
TJI "Initial release"          2023-11-01 RCSB 
TJI "Modify PCM"               2024-09-27 PDBE 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      TJI 
_pdbx_chem_comp_synonyms.name         "Ethyl 2-(bromomethyl)acrylate (precursor)" 
_pdbx_chem_comp_synonyms.provenance   AUTHOR 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_pcm.pcm_id 
_pdbx_chem_comp_pcm.comp_id 
_pdbx_chem_comp_pcm.modified_residue_id 
_pdbx_chem_comp_pcm.type 
_pdbx_chem_comp_pcm.category 
_pdbx_chem_comp_pcm.position 
_pdbx_chem_comp_pcm.polypeptide_position 
_pdbx_chem_comp_pcm.comp_id_linking_atom 
_pdbx_chem_comp_pcm.modified_residue_id_linking_atom 
_pdbx_chem_comp_pcm.uniprot_specific_ptm_accession 
_pdbx_chem_comp_pcm.uniprot_generic_ptm_accession 
1 TJI CYS None Crosslinker "Amino-acid side chain" "Any position" C5 SG ? ? 
2 TJI CYS None Crosslinker "Amino-acid side chain" "Any position" C6 SG ? ? 
3 TJI LYS None Crosslinker "Amino-acid side chain" "Any position" C5 NZ ? ? 
4 TJI LYS None Crosslinker "Amino-acid side chain" "Any position" C6 NZ ? ? 
# 
