data_S9I
# 
_chem_comp.id                                    S9I 
_chem_comp.name                                  "2-methyl-6-{[(1S,2S)-2-(5-methylpyridin-2-yl)cyclopropyl]methoxy}-N-[(5-methyl-1,3,4-thiadiazol-2-yl)methyl]pyrimidin-4-amine" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C19 H22 N6 O S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-06-29 
_chem_comp.pdbx_modified_date                    2023-02-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        382.483 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     S9I 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8DI4 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
S9I N1  N1  N 0 1 N N N 5.288  11.158 45.691 -3.680 0.766  0.050  N1  S9I 1  
S9I N3  N2  N 0 1 Y N N 8.274  10.128 43.755 -6.115 -0.881 -1.339 N3  S9I 2  
S9I C4  C1  C 0 1 N N N 3.344  14.953 41.472 2.318  1.235  -0.343 C4  S9I 3  
S9I C5  C2  C 0 1 Y N N 4.088  13.632 43.331 -0.047 1.209  -0.135 C5  S9I 4  
S9I C6  C3  C 0 1 Y N N 4.803  12.526 43.764 -1.288 0.592  -0.217 C6  S9I 5  
S9I C7  C4  C 0 1 Y N N 4.700  12.261 45.137 -2.418 1.336  0.117  C7  S9I 6  
S9I C8  C5  C 0 1 N N N 6.069  10.194 44.925 -3.832 -0.630 -0.367 C8  S9I 7  
S9I C10 C6  C 0 1 Y N N 9.465  11.958 44.253 -7.570 -1.709 0.050  C10 S9I 8  
S9I C13 C7  C 0 1 N N N 2.626  14.996 46.357 -0.948 4.586  1.004  C13 S9I 9  
S9I C15 C8  C 0 1 Y N N 2.577  16.420 36.740 6.599  -0.890 -1.141 C15 S9I 10 
S9I C17 C9  C 0 1 Y N N 3.546  18.548 36.185 7.899  -1.889 0.588  C17 S9I 11 
S9I C18 C10 C 0 1 N N N 3.895  19.615 35.180 8.959  -2.853 1.054  C18 S9I 12 
S9I C   C11 C 0 1 Y N N 3.901  18.651 37.527 7.214  -1.108 1.500  C   S9I 13 
S9I C16 C12 C 0 1 Y N N 2.867  17.398 35.812 7.586  -1.786 -0.759 C16 S9I 14 
S9I C1  C13 C 0 1 Y N N 2.954  16.622 38.062 5.964  -0.135 -0.174 C1  S9I 15 
S9I N   N3  N 0 1 Y N N 3.629  17.716 38.453 6.285  -0.262 1.099  N   S9I 16 
S9I C2  C14 C 0 1 N N S 2.489  15.683 39.147 4.895  0.846  -0.578 C2  S9I 17 
S9I C14 C15 C 0 1 N N N 2.657  14.198 39.053 4.290  0.697  -1.975 C14 S9I 18 
S9I C3  C16 C 0 1 N N S 3.527  14.999 39.970 3.471  0.311  -0.742 C3  S9I 19 
S9I O   O1  O 0 1 N N N 4.121  13.866 41.994 1.081  0.529  -0.454 O   S9I 20 
S9I N5  N4  N 0 1 Y N N 3.383  14.421 44.135 0.020  2.479  0.257  N5  S9I 21 
S9I C12 C17 C 0 1 Y N N 3.366  14.088 45.427 -1.072 3.150  0.565  C12 S9I 22 
S9I N4  N5  N 0 1 Y N N 3.985  13.032 45.964 -2.268 2.602  0.500  N4  S9I 23 
S9I C9  C18 C 0 1 Y N N 7.422  10.731 44.511 -5.292 -1.004 -0.349 C9  S9I 24 
S9I N2  N6  N 0 1 Y N N 9.465  10.842 43.600 -7.306 -1.250 -1.131 N2  S9I 25 
S9I S   S1  S 0 1 Y N N 7.991  12.269 45.108 -6.138 -1.660 0.987  S   S9I 26 
S9I C11 C19 C 0 1 N N N 10.641 12.872 44.344 -8.913 -2.203 0.521  C11 S9I 27 
S9I H1  H1  H 0 1 N N N 4.547  10.636 46.113 -4.462 1.290  0.284  H1  S9I 28 
S9I H2  H2  H 0 1 N N N 3.685  15.900 41.916 2.457  1.565  0.687  H2  S9I 29 
S9I H3  H3  H 0 1 N N N 2.282  14.798 41.711 2.302  2.102  -1.003 H3  S9I 30 
S9I H4  H4  H 0 1 N N N 5.393  11.916 43.096 -1.376 -0.437 -0.532 H4  S9I 31 
S9I H5  H5  H 0 1 N N N 5.505  9.926  44.019 -3.439 -0.752 -1.377 H5  S9I 32 
S9I H6  H6  H 0 1 N N N 6.221  9.296  45.542 -3.283 -1.276 0.317  H6  S9I 33 
S9I H7  H7  H 0 1 N N N 2.196  15.833 45.788 -1.005 5.239  0.133  H7  S9I 34 
S9I H8  H8  H 0 1 N N N 1.819  14.436 46.851 -1.758 4.827  1.692  H8  S9I 35 
S9I H9  H9  H 0 1 N N N 3.319  15.387 47.116 0.009  4.732  1.505  H9  S9I 36 
S9I H10 H10 H 0 1 N N N 2.067  15.515 36.445 6.333  -0.781 -2.182 H10 S9I 37 
S9I H11 H11 H 0 1 N N N 3.080  20.352 35.129 8.503  -3.821 1.262  H11 S9I 38 
S9I H12 H12 H 0 1 N N N 4.825  20.117 35.486 9.714  -2.967 0.275  H12 S9I 39 
S9I H13 H13 H 0 1 N N N 4.035  19.155 34.191 9.427  -2.469 1.960  H13 S9I 40 
S9I H14 H14 H 0 1 N N N 4.428  19.539 37.844 7.442  -1.191 2.552  H14 S9I 41 
S9I H15 H15 H 0 1 N N N 2.562  17.267 34.784 8.098  -2.391 -1.493 H15 S9I 42 
S9I H16 H16 H 0 1 N N N 1.599  16.018 39.699 5.010  1.857  -0.185 H16 S9I 43 
S9I H17 H17 H 0 1 N N N 1.888  13.529 39.468 4.009  1.608  -2.502 H17 S9I 44 
S9I H18 H18 H 0 1 N N N 3.082  13.748 38.144 4.667  -0.112 -2.602 H18 S9I 45 
S9I H19 H19 H 0 1 N N N 4.565  15.138 39.632 3.308  -0.751 -0.558 H19 S9I 46 
S9I H20 H20 H 0 1 N N N 11.482 12.446 43.777 -9.476 -1.373 0.950  H20 S9I 47 
S9I H21 H21 H 0 1 N N N 10.376 13.853 43.924 -9.465 -2.617 -0.323 H21 S9I 48 
S9I H22 H22 H 0 1 N N N 10.932 12.991 45.398 -8.771 -2.975 1.277  H22 S9I 49 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
S9I C18 C17 SING N N 1  
S9I C16 C17 DOUB Y N 2  
S9I C16 C15 SING Y N 3  
S9I C17 C   SING Y N 4  
S9I C15 C1  DOUB Y N 5  
S9I C   N   DOUB Y N 6  
S9I C1  N   SING Y N 7  
S9I C1  C2  SING N N 8  
S9I C14 C2  SING N N 9  
S9I C14 C3  SING N N 10 
S9I C2  C3  SING N N 11 
S9I C3  C4  SING N N 12 
S9I C4  O   SING N N 13 
S9I O   C5  SING N N 14 
S9I C5  C6  DOUB Y N 15 
S9I C5  N5  SING Y N 16 
S9I N2  N3  SING Y N 17 
S9I N2  C10 DOUB Y N 18 
S9I N3  C9  DOUB Y N 19 
S9I C6  C7  SING Y N 20 
S9I N5  C12 DOUB Y N 21 
S9I C10 C11 SING N N 22 
S9I C10 S   SING Y N 23 
S9I C9  C8  SING N N 24 
S9I C9  S   SING Y N 25 
S9I C8  N1  SING N N 26 
S9I C7  N1  SING N N 27 
S9I C7  N4  DOUB Y N 28 
S9I C12 N4  SING Y N 29 
S9I C12 C13 SING N N 30 
S9I N1  H1  SING N N 31 
S9I C4  H2  SING N N 32 
S9I C4  H3  SING N N 33 
S9I C6  H4  SING N N 34 
S9I C8  H5  SING N N 35 
S9I C8  H6  SING N N 36 
S9I C13 H7  SING N N 37 
S9I C13 H8  SING N N 38 
S9I C13 H9  SING N N 39 
S9I C15 H10 SING N N 40 
S9I C18 H11 SING N N 41 
S9I C18 H12 SING N N 42 
S9I C18 H13 SING N N 43 
S9I C   H14 SING N N 44 
S9I C16 H15 SING N N 45 
S9I C2  H16 SING N N 46 
S9I C14 H17 SING N N 47 
S9I C14 H18 SING N N 48 
S9I C3  H19 SING N N 49 
S9I C11 H20 SING N N 50 
S9I C11 H21 SING N N 51 
S9I C11 H22 SING N N 52 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
S9I SMILES           ACDLabs              12.01 "Cc1ccc(nc1)C1CC1COc1cc(nc(C)n1)NCc1nnc(C)s1"                                                                                                                         
S9I InChI            InChI                1.06  "InChI=1S/C19H22N6OS/c1-11-4-5-16(20-8-11)15-6-14(15)10-26-18-7-17(22-12(2)23-18)21-9-19-25-24-13(3)27-19/h4-5,7-8,14-15H,6,9-10H2,1-3H3,(H,21,22,23)/t14-,15+/m1/s1" 
S9I InChIKey         InChI                1.06  WQKPZDLZRFTMTI-CABCVRRESA-N                                                                                                                                           
S9I SMILES_CANONICAL CACTVS               3.385 "Cc1ccc(nc1)[C@H]2C[C@@H]2COc3cc(NCc4sc(C)nn4)nc(C)n3"                                                                                                                
S9I SMILES           CACTVS               3.385 "Cc1ccc(nc1)[CH]2C[CH]2COc3cc(NCc4sc(C)nn4)nc(C)n3"                                                                                                                   
S9I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccc(nc1)[C@H]2C[C@@H]2COc3cc(nc(n3)C)NCc4nnc(s4)C"                                                                                                                
S9I SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1ccc(nc1)C2CC2COc3cc(nc(n3)C)NCc4nnc(s4)C"                                                                                                                         
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
S9I "SYSTEMATIC NAME" ACDLabs              12.01 "2-methyl-6-{[(1S,2S)-2-(5-methylpyridin-2-yl)cyclopropyl]methoxy}-N-[(5-methyl-1,3,4-thiadiazol-2-yl)methyl]pyrimidin-4-amine"          
S9I "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "2-methyl-6-[[(1~{S},2~{S})-2-(5-methylpyridin-2-yl)cyclopropyl]methoxy]-~{N}-[(5-methyl-1,3,4-thiadiazol-2-yl)methyl]pyrimidin-4-amine" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
S9I "Create component" 2022-06-29 RCSB 
S9I "Initial release"  2023-02-08 RCSB 
# 
