data_S7I
# 
_chem_comp.id                                    S7I 
_chem_comp.name                                  "~{N}-[3-(5-carbamimidoylthiophen-3-yl)phenyl]-1-(4-chloranylphenoxy)cyclopentane-1-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C23 H22 Cl N3 O2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-12-14 
_chem_comp.pdbx_modified_date                    2023-07-28 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        439.958 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     S7I 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8BYD 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
S7I C10  C1  C  0 1 Y N N -18.791 -21.936 -4.961 -2.206 2.277  -1.284 C10  S7I 1  
S7I C15  C2  C  0 1 N N N -16.497 -19.002 -1.261 2.605  1.567  -0.197 C15  S7I 2  
S7I C18  C3  C  0 1 N N N -15.968 -17.448 0.733  4.480  2.381  1.252  C18  S7I 3  
S7I C19  C4  C  0 1 N N N -14.836 -16.931 1.243  6.005  2.379  1.044  C19  S7I 4  
S7I C20  C5  C  0 1 N N N -13.676 -17.347 0.158  6.321  1.196  0.106  C20  S7I 5  
S7I C21  C6  C  0 1 N N N -14.162 -18.300 -0.672 4.996  0.951  -0.657 C21  S7I 6  
S7I C23  C7  C  0 1 Y N N -16.506 -20.492 1.294  3.225  -1.061 0.684  C23  S7I 7  
S7I C24  C8  C  0 1 Y N N -17.804 -19.948 1.344  2.949  -2.182 1.454  C24  S7I 8  
S7I C02  C9  C  0 1 N N N -20.556 -16.193 -6.747 -6.971 0.102  -0.170 C02  S7I 9  
S7I C04  C10 C  0 1 Y N N -20.303 -17.655 -6.642 -5.555 0.096  0.229  C04  S7I 10 
S7I C05  C11 C  0 1 Y N N -19.514 -18.196 -5.611 -4.583 0.843  -0.337 C05  S7I 11 
S7I C06  C12 C  0 1 Y N N -19.442 -19.640 -5.791 -3.332 0.647  0.230  C06  S7I 12 
S7I C07  C13 C  0 1 Y N N -20.183 -20.082 -6.936 -3.309 -0.248 1.237  C07  S7I 13 
S7I C09  C14 C  0 1 Y N N -18.670 -20.540 -4.810 -2.119 1.363  -0.236 C09  S7I 14 
S7I C11  C15 C  0 1 Y N N -18.131 -22.764 -4.091 -1.076 2.943  -1.716 C11  S7I 15 
S7I C12  C16 C  0 1 Y N N -17.371 -22.209 -3.074 0.144  2.705  -1.112 C12  S7I 16 
S7I C13  C17 C  0 1 Y N N -17.277 -20.826 -2.932 0.240  1.794  -0.067 C13  S7I 17 
S7I C17  C18 C  0 1 N N N -15.519 -18.754 -0.064 3.923  1.198  0.433  C17  S7I 18 
S7I C25  C19 C  0 1 Y N N -18.856 -20.611 2.023  2.385  -3.299 0.869  C25  S7I 19 
S7I C26  C20 C  0 1 Y N N -18.568 -21.825 2.644  2.097  -3.301 -0.485 C26  S7I 20 
S7I C28  C21 C  0 1 Y N N -17.310 -22.352 2.601  2.373  -2.185 -1.255 C28  S7I 21 
S7I C29  C22 C  0 1 Y N N -16.285 -21.681 1.941  2.936  -1.066 -0.673 C29  S7I 22 
S7I C30  C23 C  0 1 Y N N -17.944 -19.966 -3.799 -0.890 1.123  0.373  C30  S7I 23 
S7I N01  N1  N  0 1 N N N -21.188 -15.680 -7.949 -7.876 -0.708 0.486  N01  S7I 24 
S7I N03  N2  N  0 1 N N N -20.150 -15.481 -5.777 -7.372 0.875  -1.144 N03  S7I 25 
S7I N14  N3  N  0 1 N N N -16.443 -20.357 -1.821 1.478  1.555  0.541  N14  S7I 26 
S7I O16  O1  O  0 1 N N N -17.223 -18.157 -1.651 2.559  1.875  -1.370 O16  S7I 27 
S7I O22  O2  O  0 1 N N N -15.359 -19.892 0.643  3.774  0.041  1.259  O22  S7I 28 
S7I S08  S1  S  0 1 Y N N -20.845 -18.799 -7.623 -4.869 -0.879 1.520  S08  S7I 29 
S7I CL27 CL1 CL 0 0 N N N -19.773 -22.792 3.523  1.390  -4.707 -1.218 CL27 S7I 30 
S7I H101 H1  H  0 0 N N N -19.397 -22.349 -5.754 -3.157 2.463  -1.761 H101 S7I 31 
S7I H181 H2  H  0 0 N N N -16.447 -16.728 0.053  4.247  2.247  2.308  H181 S7I 32 
S7I H182 H3  H  0 0 N N N -16.668 -17.712 1.540  4.055  3.318  0.892  H182 S7I 33 
S7I H191 H4  H  0 0 N N N -14.620 -17.365 2.230  6.320  3.315  0.582  H191 S7I 34 
S7I H192 H5  H  0 0 N N N -14.912 -15.837 1.332  6.512  2.246  1.999  H192 S7I 35 
S7I H201 H6  H  0 0 N N N -12.797 -17.738 0.691  7.118  1.461  -0.589 H201 S7I 36 
S7I H202 H7  H  0 0 N N N -13.386 -16.462 -0.428 6.599  0.315  0.685  H202 S7I 37 
S7I H211 H8  H  0 0 N N N -13.465 -19.150 -0.727 4.884  1.662  -1.476 H211 S7I 38 
S7I H212 H9  H  0 0 N N N -14.315 -17.886 -1.680 4.945  -0.074 -1.024 H212 S7I 39 
S7I H241 H10 H  0 0 N N N -18.002 -19.006 0.855  3.174  -2.180 2.510  H241 S7I 40 
S7I H051 H11 H  0 0 N N N -19.041 -17.635 -4.819 -4.762 1.528  -1.153 H051 S7I 41 
S7I H071 H12 H  0 0 N N N -20.277 -21.103 -7.275 -2.425 -0.525 1.792  H071 S7I 42 
S7I H111 H13 H  0 0 N N N -18.202 -23.836 -4.197 -1.146 3.651  -2.528 H111 S7I 43 
S7I H121 H14 H  0 0 N N N -16.847 -22.854 -2.385 1.025  3.227  -1.454 H121 S7I 44 
S7I H251 H15 H  0 0 N N N -19.850 -20.189 2.058  2.170  -4.172 1.468  H251 S7I 45 
S7I H281 H16 H  0 0 N N N -17.108 -23.297 3.083  2.148  -2.189 -2.311 H281 S7I 46 
S7I H291 H17 H  0 0 N N N -15.292 -22.106 1.938  3.151  -0.195 -1.274 H291 S7I 47 
S7I H301 H18 H  0 0 N N N -17.892 -18.894 -3.681 -0.817 0.415  1.186  H301 S7I 48 
S7I H012 H19 H  0 0 N N N -21.332 -14.696 -8.058 -7.578 -1.281 1.209  H012 S7I 49 
S7I H031 H20 H  0 0 N N N -19.708 -16.031 -5.068 -6.737 1.444  -1.605 H031 S7I 50 
S7I H141 H22 H  0 0 N N N -15.795 -21.003 -1.418 1.524  1.380  1.494  H141 S7I 51 
S7I H011 H23 H  0 0 N N N -21.480 -16.310 -8.668 -8.810 -0.704 0.223  H011 S7I 52 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
S7I N01 C02  SING N N 1  
S7I S08 C07  SING Y N 2  
S7I S08 C04  SING Y N 3  
S7I C07 C06  DOUB Y N 4  
S7I C02 C04  SING N N 5  
S7I C02 N03  DOUB N N 6  
S7I C04 C05  DOUB Y N 7  
S7I C06 C05  SING Y N 8  
S7I C06 C09  SING N N 9  
S7I C10 C09  DOUB Y N 10 
S7I C10 C11  SING Y N 11 
S7I C09 C30  SING Y N 12 
S7I C11 C12  DOUB Y N 13 
S7I C30 C13  DOUB Y N 14 
S7I C12 C13  SING Y N 15 
S7I C13 N14  SING N N 16 
S7I N14 C15  SING N N 17 
S7I O16 C15  DOUB N N 18 
S7I C15 C17  SING N N 19 
S7I C21 C17  SING N N 20 
S7I C21 C20  SING N N 21 
S7I C17 O22  SING N N 22 
S7I C17 C18  SING N N 23 
S7I C20 C19  SING N N 24 
S7I O22 C23  SING N N 25 
S7I C18 C19  SING N N 26 
S7I C23 C24  DOUB Y N 27 
S7I C23 C29  SING Y N 28 
S7I C24 C25  SING Y N 29 
S7I C29 C28  DOUB Y N 30 
S7I C25 C26  DOUB Y N 31 
S7I C28 C26  SING Y N 32 
S7I C26 CL27 SING N N 33 
S7I C10 H101 SING N N 34 
S7I C18 H181 SING N N 35 
S7I C18 H182 SING N N 36 
S7I C19 H191 SING N N 37 
S7I C19 H192 SING N N 38 
S7I C20 H201 SING N N 39 
S7I C20 H202 SING N N 40 
S7I C21 H211 SING N N 41 
S7I C21 H212 SING N N 42 
S7I C24 H241 SING N N 43 
S7I C05 H051 SING N N 44 
S7I C07 H071 SING N N 45 
S7I C11 H111 SING N N 46 
S7I C12 H121 SING N N 47 
S7I C25 H251 SING N N 48 
S7I C28 H281 SING N N 49 
S7I C29 H291 SING N N 50 
S7I C30 H301 SING N N 51 
S7I N01 H012 SING N N 52 
S7I N03 H031 SING N N 53 
S7I N14 H141 SING N N 54 
S7I N01 H011 SING N N 55 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
S7I InChI            InChI                1.06    "InChI=1S/C23H22ClN3O2S/c24-17-6-8-19(9-7-17)29-23(10-1-2-11-23)22(28)27-18-5-3-4-15(12-18)16-13-20(21(25)26)30-14-16/h3-9,12-14H,1-2,10-11H2,(H3,25,26)(H,27,28)" 
S7I InChIKey         InChI                1.06    BSMYIEBMKAPIJY-UHFFFAOYSA-N                                                                                                                                        
S7I SMILES_CANONICAL CACTVS               3.385   "NC(=N)c1scc(c1)c2cccc(NC(=O)C3(CCCC3)Oc4ccc(Cl)cc4)c2"                                                                                                            
S7I SMILES           CACTVS               3.385   "NC(=N)c1scc(c1)c2cccc(NC(=O)C3(CCCC3)Oc4ccc(Cl)cc4)c2"                                                                                                            
S7I SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "[H]/N=C(/c1cc(cs1)c2cccc(c2)NC(=O)C3(CCCC3)Oc4ccc(cc4)Cl)\N"                                                                                                      
S7I SMILES           "OpenEye OEToolkits" 3.1.0.0 "c1cc(cc(c1)NC(=O)C2(CCCC2)Oc3ccc(cc3)Cl)c4cc(sc4)C(=N)N"                                                                                                          
# 
_pdbx_chem_comp_identifier.comp_id           S7I 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   3.1.0.0 
_pdbx_chem_comp_identifier.identifier        "~{N}-[3-(5-carbamimidoylthiophen-3-yl)phenyl]-1-(4-chloranylphenoxy)cyclopentane-1-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
S7I "Create component"   2022-12-14 PDBE 
S7I "Modify coordinates" 2022-12-14 PDBE 
S7I "Initial release"    2023-08-02 RCSB 
# 
