data_S1I
# 
_chem_comp.id                                    S1I 
_chem_comp.name                                  "~{N}-[3-(5-carbamimidoylthiophen-3-yl)phenyl]-4,4-bis(fluoranyl)-1-phenoxy-cyclohexane-1-carboxamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C24 H23 F2 N3 O2 S" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-12-09 
_chem_comp.pdbx_modified_date                    2023-07-28 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        455.520 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     S1I 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8BXO 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
S1I C10  C1  C 0 1 Y N N -18.958 -22.509 -6.146 -2.531 -0.460 1.888  C10  S1I 1  
S1I C11  C2  C 0 1 Y N N -18.429 -23.482 -5.310 -1.301 -0.673 2.477  C11  S1I 2  
S1I C12  C3  C 0 1 Y N N -18.090 -23.172 -3.988 -0.147 -0.612 1.719  C12  S1I 3  
S1I C13  C4  C 0 1 Y N N -18.275 -21.887 -3.532 -0.219 -0.336 0.359  C13  S1I 4  
S1I C15  C5  C 0 1 N N N -18.095 -22.367 -1.046 2.103  0.143  0.158  C15  S1I 5  
S1I C17  C6  C 0 1 N N N -17.828 -21.700 0.316  3.347  0.278  -0.682 C17  S1I 6  
S1I C18  C7  C 0 1 N N N -17.370 -22.710 1.367  4.564  0.438  0.231  C18  S1I 7  
S1I C19  C8  C 0 1 N N N -17.415 -22.093 2.748  4.393  1.690  1.094  C19  S1I 8  
S1I C20  C9  C 0 1 N N N -18.785 -21.513 3.088  4.268  2.918  0.191  C20  S1I 9  
S1I C23  C10 C 0 1 N N N -19.269 -20.525 2.038  3.051  2.759  -0.722 C23  S1I 10 
S1I C24  C11 C 0 1 N N N -19.232 -21.201 0.679  3.222  1.507  -1.585 C24  S1I 11 
S1I C02  C12 C 0 1 N N N -20.781 -16.563 -7.228 -7.604 0.248  0.324  C02  S1I 12 
S1I C04  C13 C 0 1 Y N N -20.444 -18.017 -7.210 -6.215 0.237  -0.162 C04  S1I 13 
S1I C05  C14 C 0 1 Y N N -19.879 -18.739 -6.134 -5.125 -0.000 0.599  C05  S1I 14 
S1I C06  C15 C 0 1 Y N N -19.722 -20.176 -6.560 -3.934 0.048  -0.110 C06  S1I 15 
S1I C07  C16 C 0 1 Y N N -20.135 -20.403 -7.903 -4.075 0.321  -1.423 C07  S1I 16 
S1I C09  C17 C 0 1 Y N N -19.141 -21.233 -5.655 -2.612 -0.182 0.525  C09  S1I 17 
S1I C26  C18 C 0 1 Y N N -15.675 -20.642 0.042  3.455  -2.091 -0.852 C26  S1I 18 
S1I C27  C19 C 0 1 Y N N -14.908 -19.637 0.600  3.587  -3.267 -1.576 C27  S1I 19 
S1I C28  C20 C 0 1 Y N N -13.524 -19.713 0.481  3.533  -4.486 -0.927 C28  S1I 20 
S1I C29  C21 C 0 1 Y N N -12.947 -20.762 -0.218 3.349  -4.533 0.443  C29  S1I 21 
S1I C30  C22 C 0 1 Y N N -13.722 -21.756 -0.804 3.217  -3.362 1.166  C30  S1I 22 
S1I C31  C23 C 0 1 Y N N -15.106 -21.698 -0.675 3.275  -2.141 0.523  C31  S1I 23 
S1I C32  C24 C 0 1 Y N N -18.836 -20.913 -4.344 -1.450 -0.120 -0.240 C32  S1I 24 
S1I F21  F1  F 0 1 N N N -18.743 -20.891 4.307  5.423  3.044  -0.589 F21  S1I 25 
S1I F22  F2  F 0 1 N N N -19.680 -22.551 3.149  4.112  4.063  0.980  F22  S1I 26 
S1I N01  N1  N 0 1 N N N -20.510 -15.776 -6.054 -8.640 0.503  -0.552 N01  S1I 27 
S1I N03  N2  N 0 1 N N N -21.253 -16.113 -8.294 -7.857 0.015  1.585  N03  S1I 28 
S1I N14  N3  N 0 1 N N N -17.981 -21.476 -2.170 0.952  -0.274 -0.405 N14  S1I 29 
S1I O16  O1  O 0 1 N N N -18.455 -23.498 -1.153 2.138  0.410  1.341  O16  S1I 30 
S1I O25  O2  O 0 1 N N N -17.065 -20.515 0.212  3.507  -0.891 -1.488 O25  S1I 31 
S1I S08  S1  S 0 1 Y N N -20.688 -18.995 -8.496 -5.720 0.522  -1.824 S08  S1I 32 
S1I H101 H1  H 0 0 N N N -19.222 -22.747 -7.166 -3.431 -0.512 2.483  H101 S1I 33 
S1I H111 H2  H 0 0 N N N -18.278 -24.485 -5.682 -1.240 -0.889 3.534  H111 S1I 34 
S1I H121 H3  H 0 0 N N N -17.688 -23.932 -3.334 0.813  -0.780 2.185  H121 S1I 35 
S1I H182 H4  H 0 0 N N N -18.034 -23.587 1.340  4.653  -0.438 0.874  H182 S1I 36 
S1I H181 H5  H 0 0 N N N -16.339 -23.023 1.144  5.464  0.535  -0.376 H181 S1I 37 
S1I H192 H6  H 0 0 N N N -17.167 -22.868 3.488  3.493  1.592  1.702  H192 S1I 38 
S1I H191 H7  H 0 0 N N N -16.669 -21.286 2.798  5.260  1.804  1.745  H191 S1I 39 
S1I H232 H8  H 0 0 N N N -18.613 -19.642 2.030  2.151  2.661  -0.114 H232 S1I 40 
S1I H231 H9  H 0 0 N N N -20.299 -20.214 2.269  2.962  3.634  -1.365 H231 S1I 41 
S1I H242 H10 H 0 0 N N N -19.559 -20.480 -0.084 4.121  1.604  -2.193 H242 S1I 42 
S1I H241 H11 H 0 0 N N N -19.920 -22.059 0.692  2.355  1.393  -2.235 H241 S1I 43 
S1I H051 H12 H 0 0 N N N -19.607 -18.331 -5.172 -5.176 -0.207 1.658  H051 S1I 44 
S1I H071 H13 H 0 0 N N N -20.089 -21.343 -8.433 -3.257 0.397  -2.125 H071 S1I 45 
S1I H271 H14 H 0 0 N N N -15.373 -18.811 1.117  3.730  -3.231 -2.645 H271 S1I 46 
S1I H281 H15 H 0 0 N N N -12.900 -18.956 0.932  3.636  -5.402 -1.489 H281 S1I 47 
S1I H291 H16 H 0 0 N N N -11.872 -20.808 -0.309 3.308  -5.487 0.948  H291 S1I 48 
S1I H301 H17 H 0 0 N N N -13.256 -22.562 -1.352 3.077  -3.402 2.237  H301 S1I 49 
S1I H311 H18 H 0 0 N N N -15.731 -22.457 -1.122 3.172  -1.227 1.088  H311 S1I 50 
S1I H321 H19 H 0 0 N N N -19.031 -19.923 -3.960 -1.508 0.095  -1.296 H321 S1I 51 
S1I H012 H20 H 0 0 N N N -20.104 -16.205 -5.247 -8.452 0.676  -1.487 H012 S1I 52 
S1I H031 H22 H 0 0 N N N -21.425 -15.129 -8.242 -8.772 0.023  1.905  H031 S1I 53 
S1I H141 H23 H 0 0 N N N -17.687 -20.534 -2.007 0.934  -0.532 -1.340 H141 S1I 54 
S1I H011 H24 H 0 0 N N N -20.728 -14.800 -6.045 -9.555 0.511  -0.231 H011 S1I 55 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
S1I S08 C07  SING Y N 1  
S1I S08 C04  SING Y N 2  
S1I N03 C02  DOUB N N 3  
S1I C07 C06  DOUB Y N 4  
S1I C02 C04  SING N N 5  
S1I C02 N01  SING N N 6  
S1I C04 C05  DOUB Y N 7  
S1I C06 C05  SING Y N 8  
S1I C06 C09  SING N N 9  
S1I C10 C09  DOUB Y N 10 
S1I C10 C11  SING Y N 11 
S1I C09 C32  SING Y N 12 
S1I C11 C12  DOUB Y N 13 
S1I C32 C13  DOUB Y N 14 
S1I C12 C13  SING Y N 15 
S1I C13 N14  SING N N 16 
S1I N14 C15  SING N N 17 
S1I O16 C15  DOUB N N 18 
S1I C15 C17  SING N N 19 
S1I C30 C31  DOUB Y N 20 
S1I C30 C29  SING Y N 21 
S1I C31 C26  SING Y N 22 
S1I C29 C28  DOUB Y N 23 
S1I C26 O25  SING N N 24 
S1I C26 C27  DOUB Y N 25 
S1I O25 C17  SING N N 26 
S1I C17 C24  SING N N 27 
S1I C17 C18  SING N N 28 
S1I C28 C27  SING Y N 29 
S1I C24 C23  SING N N 30 
S1I C18 C19  SING N N 31 
S1I C23 C20  SING N N 32 
S1I C19 C20  SING N N 33 
S1I C20 F22  SING N N 34 
S1I C20 F21  SING N N 35 
S1I C10 H101 SING N N 36 
S1I C11 H111 SING N N 37 
S1I C12 H121 SING N N 38 
S1I C18 H182 SING N N 39 
S1I C18 H181 SING N N 40 
S1I C19 H192 SING N N 41 
S1I C19 H191 SING N N 42 
S1I C23 H232 SING N N 43 
S1I C23 H231 SING N N 44 
S1I C24 H242 SING N N 45 
S1I C24 H241 SING N N 46 
S1I C05 H051 SING N N 47 
S1I C07 H071 SING N N 48 
S1I C27 H271 SING N N 49 
S1I C28 H281 SING N N 50 
S1I C29 H291 SING N N 51 
S1I C30 H301 SING N N 52 
S1I C31 H311 SING N N 53 
S1I C32 H321 SING N N 54 
S1I N01 H012 SING N N 55 
S1I N03 H031 SING N N 56 
S1I N14 H141 SING N N 57 
S1I N01 H011 SING N N 58 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
S1I InChI            InChI                1.06    "InChI=1S/C24H23F2N3O2S/c25-24(26)11-9-23(10-12-24,31-19-7-2-1-3-8-19)22(30)29-18-6-4-5-16(13-18)17-14-20(21(27)28)32-15-17/h1-8,13-15H,9-12H2,(H3,27,28)(H,29,30)" 
S1I InChIKey         InChI                1.06    XJIKVAPKYYLZHB-UHFFFAOYSA-N                                                                                                                                         
S1I SMILES_CANONICAL CACTVS               3.385   "NC(=N)c1scc(c1)c2cccc(NC(=O)C3(CCC(F)(F)CC3)Oc4ccccc4)c2"                                                                                                          
S1I SMILES           CACTVS               3.385   "NC(=N)c1scc(c1)c2cccc(NC(=O)C3(CCC(F)(F)CC3)Oc4ccccc4)c2"                                                                                                          
S1I SMILES_CANONICAL "OpenEye OEToolkits" 3.1.0.0 "[H]/N=C(/c1cc(cs1)c2cccc(c2)NC(=O)C3(CCC(CC3)(F)F)Oc4ccccc4)\N"                                                                                                    
S1I SMILES           "OpenEye OEToolkits" 3.1.0.0 "c1ccc(cc1)OC2(CCC(CC2)(F)F)C(=O)Nc3cccc(c3)c4cc(sc4)C(=N)N"                                                                                                        
# 
_pdbx_chem_comp_identifier.comp_id           S1I 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   3.1.0.0 
_pdbx_chem_comp_identifier.identifier        "~{N}-[3-(5-carbamimidoylthiophen-3-yl)phenyl]-4,4-bis(fluoranyl)-1-phenoxy-cyclohexane-1-carboxamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
S1I "Create component" 2022-12-09 PDBE 
S1I "Initial release"  2023-08-02 RCSB 
# 
