data_R3I
# 
_chem_comp.id                                    R3I 
_chem_comp.name                                  "(3S)-5-chloro-1'-(6-fluoroisoquinolin-4-yl)-2H-spiro[[1]benzofuran-3,3'-pyrrolidin]-2'-one" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C20 H14 Cl F N2 O2" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-08-21 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        368.789 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     R3I 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7GL1 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
R3I N1  N1  N  0 1 N N N N N N -20.202 5.114 27.318 0.799  -0.213 -0.802 N1  R3I 1  
R3I C4  C1  C  0 1 Y N N N N N -16.407 5.146 25.572 4.034  -2.685 0.038  C4  R3I 2  
R3I C5  C2  C  0 1 Y N N N N N -18.181 4.008 26.435 1.846  -2.383 -0.660 C5  R3I 3  
R3I C6  C3  C  0 1 Y N N N N N -18.934 5.157 26.654 1.906  -1.014 -0.510 C6  R3I 4  
R3I C7  C4  C  0 1 N N N N N N -21.464 5.025 26.567 0.520  0.366  -2.123 C7  R3I 5  
R3I C8  C5  C  0 1 N N N N N N -22.490 4.644 27.628 -0.971 0.778  -2.087 C8  R3I 6  
R3I C10 C6  C  0 1 N N N N N N -22.332 6.544 29.470 -1.111 2.436  -0.175 C10 R3I 7  
R3I C13 C7  C  0 1 Y N N N N N -22.697 3.178 32.625 -5.237 0.480  0.632  C13 R3I 8  
R3I C15 C8  C  0 1 Y N N N N N -22.324 2.907 30.248 -3.227 -0.643 -0.023 C15 R3I 9  
R3I C17 C9  C  0 1 N N N N N N -20.383 5.131 28.670 -0.153 0.123  0.091  C17 R3I 10 
R3I O1  O1  O  0 1 N N N N N N -19.497 5.123 29.505 -0.164 -0.204 1.259  O1  R3I 11 
R3I C9  C10 C  0 1 N N S N N N -21.886 5.155 28.955 -1.201 0.959  -0.582 C9  R3I 12 
R3I C16 C11 C  0 1 Y N N N N N -22.272 4.291 30.120 -2.597 0.572  -0.177 C16 R3I 13 
R3I C14 C12 C  0 1 Y N N N N N -22.519 2.374 31.509 -4.549 -0.695 0.382  C14 R3I 14 
R3I CL  CL1 CL 0 0 N N N N N N -22.499 0.639 31.704 -5.342 -2.227 0.576  CL  R3I 15 
R3I C12 C13 C  0 1 Y N N N N N -22.681 4.557 32.483 -4.611 1.699  0.474  C12 R3I 16 
R3I C11 C14 C  0 1 Y N N N N N -22.471 5.099 31.226 -3.283 1.760  0.063  C11 R3I 17 
R3I O   O2  O  0 1 N N N N N N -22.483 6.444 30.918 -2.492 2.845  -0.174 O   R3I 18 
R3I N   N2  N  0 1 Y N N N N N -16.945 3.985 25.916 2.886  -3.158 -0.388 N   R3I 19 
R3I C18 C15 C  0 1 Y N N N N N -18.357 6.408 26.288 3.114  -0.440 -0.055 C18 R3I 20 
R3I C19 C16 C  0 1 Y N N N N N -18.997 7.655 26.498 3.261  0.941  0.124  C19 R3I 21 
R3I C   C17 C  0 1 Y N N N N N -18.343 8.793 26.157 4.453  1.438  0.566  C   R3I 22 
R3I F   F1  F  0 1 N N N N N N -18.944 9.980 26.420 4.597  2.770  0.740  F   R3I 23 
R3I C3  C18 C  0 1 Y N N N N N -17.050 6.398 25.727 4.204  -1.304 0.225  C3  R3I 24 
R3I C2  C19 C  0 1 Y N N N N N -16.442 7.629 25.383 5.416  -0.758 0.678  C2  R3I 25 
R3I C1  C20 C  0 1 Y N N N N N -17.086 8.810 25.598 5.526  0.588  0.842  C1  R3I 26 
R3I H1  H1  H  0 1 N N N N N N -15.415 5.137 25.146 4.850  -3.361 0.249  H1  R3I 27 
R3I H2  H2  H  0 1 N N N N N N -18.626 3.062 26.704 0.928  -2.836 -1.006 H2  R3I 28 
R3I H3  H3  H  0 1 N N N N N N -21.716 5.992 26.107 1.149  1.240  -2.292 H3  R3I 29 
R3I H4  H4  H  0 1 N N N N N N -21.402 4.253 25.786 0.687  -0.377 -2.903 H4  R3I 30 
R3I H5  H5  H  0 1 N N N N N N -23.455 5.132 27.427 -1.131 1.714  -2.623 H5  R3I 31 
R3I H6  H6  H  0 1 N N N N N N -22.630 3.553 27.659 -1.606 -0.013 -2.487 H6  R3I 32 
R3I H7  H7  H  0 1 N N N N N N -21.571 7.299 29.222 -0.676 2.537  0.820  H7  R3I 33 
R3I H8  H8  H  0 1 N N N N N N -23.291 6.825 29.010 -0.538 3.007  -0.906 H8  R3I 34 
R3I H9  H9  H  0 1 N N N N N N -22.847 2.733 33.598 -6.268 0.442  0.951  H9  R3I 35 
R3I H10 H10 H  0 1 N N N N N N -22.215 2.266 29.386 -2.687 -1.558 -0.220 H10 R3I 36 
R3I H11 H11 H  0 1 N N N N N N -22.830 5.198 33.339 -5.155 2.611  0.671  H11 R3I 37 
R3I H12 H12 H  0 1 N N N N N N -19.989 7.698 26.923 2.438  1.608  -0.086 H12 R3I 38 
R3I H13 H13 H  0 1 N N N N N N -15.455 7.632 24.945 6.255  -1.403 0.895  H13 R3I 39 
R3I H14 H14 H  0 1 N N N N N N -16.617 9.746 25.333 6.459  1.006  1.191  H14 R3I 40 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
R3I C2  C1  DOUB Y N 1  
R3I C2  C3  SING Y N 2  
R3I C4  C3  DOUB Y N 3  
R3I C4  N   SING Y N 4  
R3I C1  C   SING Y N 5  
R3I C3  C18 SING Y N 6  
R3I N   C5  DOUB Y N 7  
R3I C   F   SING N N 8  
R3I C   C19 DOUB Y N 9  
R3I C18 C19 SING Y N 10 
R3I C18 C6  DOUB Y N 11 
R3I C5  C6  SING Y N 12 
R3I C7  N1  SING N N 13 
R3I C7  C8  SING N N 14 
R3I C6  N1  SING N N 15 
R3I N1  C17 SING N N 16 
R3I C8  C9  SING N N 17 
R3I C17 C9  SING N N 18 
R3I C17 O1  DOUB N N 19 
R3I C9  C10 SING N N 20 
R3I C9  C16 SING N N 21 
R3I C10 O   SING N N 22 
R3I C16 C15 DOUB Y N 23 
R3I C16 C11 SING Y N 24 
R3I C15 C14 SING Y N 25 
R3I O   C11 SING N N 26 
R3I C11 C12 DOUB Y N 27 
R3I C14 CL  SING N N 28 
R3I C14 C13 DOUB Y N 29 
R3I C12 C13 SING Y N 30 
R3I C4  H1  SING N N 31 
R3I C5  H2  SING N N 32 
R3I C7  H3  SING N N 33 
R3I C7  H4  SING N N 34 
R3I C8  H5  SING N N 35 
R3I C8  H6  SING N N 36 
R3I C10 H7  SING N N 37 
R3I C10 H8  SING N N 38 
R3I C13 H9  SING N N 39 
R3I C15 H10 SING N N 40 
R3I C12 H11 SING N N 41 
R3I C19 H12 SING N N 42 
R3I C2  H13 SING N N 43 
R3I C1  H14 SING N N 44 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
R3I SMILES           ACDLabs              12.01 "Fc1cc2c(cc1)cncc2N1CCC2(COc3ccc(Cl)cc32)C1=O"                                                                                               
R3I InChI            InChI                1.06  "InChI=1S/C20H14ClFN2O2/c21-13-2-4-18-16(7-13)20(11-26-18)5-6-24(19(20)25)17-10-23-9-12-1-3-14(22)8-15(12)17/h1-4,7-10H,5-6,11H2/t20-/m1/s1" 
R3I InChIKey         InChI                1.06  XTXMEPGJZZXFBA-HXUWFJFHSA-N                                                                                                                  
R3I SMILES_CANONICAL CACTVS               3.385 "Fc1ccc2cncc(N3CC[C@]4(COc5ccc(Cl)cc45)C3=O)c2c1"                                                                                            
R3I SMILES           CACTVS               3.385 "Fc1ccc2cncc(N3CC[C]4(COc5ccc(Cl)cc45)C3=O)c2c1"                                                                                             
R3I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "c1cc2cncc(c2cc1F)N3CC[C@@]4(C3=O)COc5c4cc(cc5)Cl"                                                                                           
R3I SMILES           "OpenEye OEToolkits" 2.0.7 "c1cc2cncc(c2cc1F)N3CCC4(C3=O)COc5c4cc(cc5)Cl"                                                                                               
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
R3I "SYSTEMATIC NAME" ACDLabs              12.01 "(3S)-5-chloro-1'-(6-fluoroisoquinolin-4-yl)-2H-spiro[[1]benzofuran-3,3'-pyrrolidin]-2'-one"            
R3I "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(3~{S})-5-chloranyl-1'-(6-fluoranylisoquinolin-4-yl)spiro[2~{H}-1-benzofuran-3,3'-pyrrolidine]-2'-one" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
R3I "Create component" 2023-08-21 RCSB 
R3I "Initial release"  2023-11-08 RCSB 
# 
