data_M9I
# 
_chem_comp.id                                    M9I 
_chem_comp.name                                  "N-(alpha-L-Fucopyranosyl)benzamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H17 N O5" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         "~{N}-[(2~{R},3~{S},4~{R},5~{S},6~{S})-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]benzamide" 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2022-07-26 
_chem_comp.pdbx_modified_date                    2022-10-28 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        267.278 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     M9I 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        8AIJ 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  PDBE 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
M9I C1  C1  C 0 1 N N R -16.520 -13.404 21.060 1.003  -0.124 -1.140 C1  M9I 1  
M9I C2  C2  C 0 1 N N S -16.022 -12.535 19.893 1.962  1.039  -0.872 C2  M9I 2  
M9I C3  C3  C 0 1 N N R -17.159 -11.778 19.244 2.310  1.070  0.620  C3  M9I 3  
M9I C4  C4  C 0 1 N N S -17.936 -10.975 20.260 2.909  -0.282 1.021  C4  M9I 4  
M9I C5  C5  C 0 1 N N S -18.392 -11.886 21.396 1.913  -1.393 0.680  C5  M9I 5  
M9I C6  C6  C 0 1 N N N -19.114 -11.121 22.469 2.528  -2.752 1.023  C6  M9I 6  
M9I O2  O1  O 0 1 N N N -15.295 -13.281 18.920 1.337  2.269  -1.243 O2  M9I 7  
M9I O3  O2  O 0 1 N N N -16.625 -10.823 18.296 3.263  2.106  0.867  O3  M9I 8  
M9I O4  O3  O 0 1 N N N -17.095 -9.887  20.758 4.127  -0.496 0.306  O4  M9I 9  
M9I O5  O4  O 0 1 N N N -17.243 -12.585 21.977 1.609  -1.347 -0.715 O5  M9I 10 
M9I O08 O5  O 0 1 N N N -16.874 -15.667 22.443 -1.445 -0.832 -2.021 O08 M9I 11 
M9I C07 C7  C 0 1 N N N -17.390 -15.620 21.327 -1.418 -0.303 -0.927 C07 M9I 12 
M9I N09 N1  N 0 1 N N N -17.283 -14.520 20.582 -0.242 0.088  -0.397 N09 M9I 13 
M9I C06 C8  C 0 1 Y N N -18.203 -16.768 20.789 -2.674 -0.089 -0.177 C06 M9I 14 
M9I C01 C9  C 0 1 Y N N -19.155 -17.410 21.580 -3.893 -0.493 -0.723 C01 M9I 15 
M9I C05 C10 C 0 1 Y N N -18.022 -17.178 19.483 -2.645 0.513  1.082  C05 M9I 16 
M9I C04 C11 C 0 1 Y N N -18.768 -18.215 18.953 -3.821 0.710  1.776  C04 M9I 17 
M9I C03 C12 C 0 1 Y N N -19.695 -18.851 19.740 -5.027 0.312  1.227  C03 M9I 18 
M9I C02 C13 C 0 1 Y N N -19.901 -18.450 21.042 -5.062 -0.290 -0.019 C02 M9I 19 
M9I H1  H1  H 0 1 N N N -15.628 -13.792 21.573 0.785  -0.177 -2.207 H1  M9I 20 
M9I H2  H2  H 0 1 N N N -15.343 -11.786 20.325 2.872  0.902  -1.456 H2  M9I 21 
M9I H3  H3  H 0 1 N N N -17.833 -12.486 18.739 1.408  1.256  1.201  H3  M9I 22 
M9I H4  H4  H 0 1 N N N -18.827 -10.553 19.771 3.110  -0.287 2.092  H4  M9I 23 
M9I H5  H5  H 0 1 N N N -19.085 -12.631 20.977 0.999  -1.252 1.257  H5  M9I 24 
M9I H6  H6  H 0 1 N N N -19.425 -11.812 23.267 2.761  -2.787 2.087  H6  M9I 25 
M9I H7  H7  H 0 1 N N N -18.444 -10.356 22.888 1.819  -3.543 0.780  H7  M9I 26 
M9I H8  H8  H 0 1 N N N -20.002 -10.635 22.038 3.442  -2.893 0.446  H8  M9I 27 
M9I H9  H9  H 0 1 N N N -14.586 -13.749 19.344 1.085  2.316  -2.175 H9  M9I 28 
M9I H10 H10 H 0 1 N N N -17.339 -10.348 17.888 2.952  2.991  0.628  H10 M9I 29 
M9I H11 H11 H 0 1 N N N -17.580 -9.379  21.398 4.562  -1.335 0.511  H11 M9I 30 
M9I H12 H12 H 0 1 N N N -17.734 -14.473 19.691 -0.220 0.511  0.476  H12 M9I 31 
M9I H13 H13 H 0 1 N N N -19.311 -17.101 22.603 -3.922 -0.963 -1.695 H13 M9I 32 
M9I H14 H14 H 0 1 N N N -17.287 -16.682 18.866 -1.704 0.824  1.512  H14 M9I 33 
M9I H15 H15 H 0 1 N N N -18.622 -18.522 17.928 -3.800 1.176  2.750  H15 M9I 34 
M9I H16 H16 H 0 1 N N N -20.268 -19.672 19.336 -5.945 0.468  1.774  H16 M9I 35 
M9I H17 H17 H 0 1 N N N -20.646 -18.947 21.646 -6.007 -0.599 -0.442 H17 M9I 36 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
M9I O3  C3  SING N N 1  
M9I O2  C2  SING N N 2  
M9I C04 C05 DOUB Y N 3  
M9I C04 C03 SING Y N 4  
M9I C3  C2  SING N N 5  
M9I C3  C4  SING N N 6  
M9I C05 C06 SING Y N 7  
M9I C03 C02 DOUB Y N 8  
M9I C2  C1  SING N N 9  
M9I C4  O4  SING N N 10 
M9I C4  C5  SING N N 11 
M9I N09 C1  SING N N 12 
M9I N09 C07 SING N N 13 
M9I C06 C07 SING N N 14 
M9I C06 C01 DOUB Y N 15 
M9I C02 C01 SING Y N 16 
M9I C1  O5  SING N N 17 
M9I C07 O08 DOUB N N 18 
M9I C5  O5  SING N N 19 
M9I C5  C6  SING N N 20 
M9I C1  H1  SING N N 21 
M9I C2  H2  SING N N 22 
M9I C3  H3  SING N N 23 
M9I C4  H4  SING N N 24 
M9I C5  H5  SING N N 25 
M9I C6  H6  SING N N 26 
M9I C6  H7  SING N N 27 
M9I C6  H8  SING N N 28 
M9I O2  H9  SING N N 29 
M9I O3  H10 SING N N 30 
M9I O4  H11 SING N N 31 
M9I N09 H12 SING N N 32 
M9I C01 H13 SING N N 33 
M9I C05 H14 SING N N 34 
M9I C04 H15 SING N N 35 
M9I C03 H16 SING N N 36 
M9I C02 H17 SING N N 37 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
M9I InChI            InChI                1.06  "InChI=1S/C13H17NO5/c1-7-9(15)10(16)11(17)13(19-7)14-12(18)8-5-3-2-4-6-8/h2-7,9-11,13,15-17H,1H3,(H,14,18)/t7-,9+,10+,11-,13+/m0/s1" 
M9I InChIKey         InChI                1.06  ZYWNMRPOYLXAAW-HTUCIKCGSA-N                                                                                                          
M9I SMILES_CANONICAL CACTVS               3.385 "C[C@@H]1O[C@@H](NC(=O)c2ccccc2)[C@@H](O)[C@H](O)[C@@H]1O"                                                                           
M9I SMILES           CACTVS               3.385 "C[CH]1O[CH](NC(=O)c2ccccc2)[CH](O)[CH](O)[CH]1O"                                                                                    
M9I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "C[C@H]1[C@H]([C@H]([C@@H]([C@@H](O1)NC(=O)c2ccccc2)O)O)O"                                                                           
M9I SMILES           "OpenEye OEToolkits" 2.0.7 "CC1C(C(C(C(O1)NC(=O)c2ccccc2)O)O)O"                                                                                                 
# 
_pdbx_chem_comp_identifier.comp_id           M9I 
_pdbx_chem_comp_identifier.type              "SYSTEMATIC NAME" 
_pdbx_chem_comp_identifier.program           "OpenEye OEToolkits" 
_pdbx_chem_comp_identifier.program_version   2.0.7 
_pdbx_chem_comp_identifier.identifier        "~{N}-[(2~{R},3~{S},4~{R},5~{S},6~{S})-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]benzamide" 
# 
_pdbx_chem_comp_synonyms.ordinal      1 
_pdbx_chem_comp_synonyms.comp_id      M9I 
_pdbx_chem_comp_synonyms.name         "~{N}-[(2~{R},3~{S},4~{R},5~{S},6~{S})-6-methyl-3,4,5-tris(oxidanyl)oxan-2-yl]benzamide" 
_pdbx_chem_comp_synonyms.provenance   PDB 
_pdbx_chem_comp_synonyms.type         ? 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
M9I "Create component"  2022-07-26 PDBE 
M9I "Modify descriptor" 2022-08-22 RCSB 
M9I "Initial release"   2022-11-02 RCSB 
# 
