data_L5I
# 
_chem_comp.id                                    L5I 
_chem_comp.name                                  "(2R)-3-cyclopropyl-2-methyl-N-(4-methylpyridin-3-yl)propanamide" 
_chem_comp.type                                  non-polymer 
_chem_comp.pdbx_type                             HETAIN 
_chem_comp.formula                               "C13 H18 N2 O" 
_chem_comp.mon_nstd_parent_comp_id               ? 
_chem_comp.pdbx_synonyms                         ? 
_chem_comp.pdbx_formal_charge                    0 
_chem_comp.pdbx_initial_date                     2023-08-15 
_chem_comp.pdbx_modified_date                    2023-11-03 
_chem_comp.pdbx_ambiguous_flag                   N 
_chem_comp.pdbx_release_status                   REL 
_chem_comp.pdbx_replaced_by                      ? 
_chem_comp.pdbx_replaces                         ? 
_chem_comp.formula_weight                        218.295 
_chem_comp.one_letter_code                       ? 
_chem_comp.three_letter_code                     L5I 
_chem_comp.pdbx_model_coordinates_details        ? 
_chem_comp.pdbx_model_coordinates_missing_flag   N 
_chem_comp.pdbx_ideal_coordinates_details        Corina 
_chem_comp.pdbx_ideal_coordinates_missing_flag   N 
_chem_comp.pdbx_model_coordinates_db_code        7GBY 
_chem_comp.pdbx_subcomponent_list                ? 
_chem_comp.pdbx_processing_site                  RCSB 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.alt_atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.charge 
_chem_comp_atom.pdbx_align 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_leaving_atom_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_backbone_atom_flag 
_chem_comp_atom.pdbx_n_terminal_atom_flag 
_chem_comp_atom.pdbx_c_terminal_atom_flag 
_chem_comp_atom.model_Cartn_x 
_chem_comp_atom.model_Cartn_y 
_chem_comp_atom.model_Cartn_z 
_chem_comp_atom.pdbx_model_Cartn_x_ideal 
_chem_comp_atom.pdbx_model_Cartn_y_ideal 
_chem_comp_atom.pdbx_model_Cartn_z_ideal 
_chem_comp_atom.pdbx_component_atom_id 
_chem_comp_atom.pdbx_component_comp_id 
_chem_comp_atom.pdbx_ordinal 
L5I N1  N1  N 0 1 Y N N N N N 7.393  0.397  17.470 -3.282 -1.811 -0.368 N1  L5I 1  
L5I C4  C1  C 0 1 N N N N N N 14.194 -0.764 23.191 5.212  -0.192 -0.686 C4  L5I 2  
L5I C5  C2  C 0 1 N N N N N N 14.493 -1.874 22.242 5.402  -0.597 0.778  C5  L5I 3  
L5I C6  C3  C 0 1 N N N N N N 9.907  -0.028 21.134 0.388  0.001  0.165  C6  L5I 4  
L5I C7  C4  C 0 1 Y N N N N N 7.871  -0.090 19.777 -1.976 0.123  -0.075 C7  L5I 5  
L5I C8  C5  C 0 1 Y N N N N N 8.180  -0.121 18.416 -2.099 -1.230 -0.359 C8  L5I 6  
L5I C10 C6  C 0 1 Y N N N N N 5.854  1.046  19.186 -4.346 0.212  0.180  C10 L5I 7  
L5I O   O1  O 0 1 N N N N N N 10.328 1.029  20.674 0.286  -1.170 0.465  O   L5I 8  
L5I C1  C7  C 0 1 N N R N N N 10.671 -0.784 22.193 1.751  0.633  0.052  C1  L5I 9  
L5I C2  C8  C 0 1 N N N N N N 12.094 -1.055 21.675 2.825  -0.411 0.363  C2  L5I 10 
L5I C3  C9  C 0 1 N N N N N N 13.090 -1.631 22.677 4.201  0.259  0.370  C3  L5I 11 
L5I C   C10 C 0 1 N N N N N N 10.683 0.067  23.464 1.951  1.163  -1.370 C   L5I 12 
L5I N   N2  N 0 1 N N N N N N 8.754  -0.614 20.749 -0.718 0.736  -0.066 N   L5I 13 
L5I C11 C11 C 0 1 Y N N N N N 6.668  0.517  20.180 -3.124 0.863  0.201  C11 L5I 14 
L5I C12 C12 C 0 1 N N N N N N 6.287  0.653  21.633 -3.037 2.334  0.516  C12 L5I 15 
L5I C9  C13 C 0 1 Y N N N N N 6.249  0.965  17.865 -4.387 -1.139 -0.111 C9  L5I 16 
L5I H1  H1  H 0 1 N N N N N N 14.509 -0.839 24.242 5.887  0.561  -1.091 H1  L5I 17 
L5I H2  H2  H 0 1 N N N N N N 14.273 0.281  22.858 4.898  -0.967 -1.385 H2  L5I 18 
L5I H3  H3  H 0 1 N N N N N N 15.030 -2.767 22.593 5.212  -1.638 1.041  H3  L5I 19 
L5I H4  H4  H 0 1 N N N N N N 14.795 -1.647 21.209 6.202  -0.109 1.335  H4  L5I 20 
L5I H5  H5  H 0 1 N N N N N N 9.105  -0.589 18.112 -1.216 -1.814 -0.575 H5  L5I 21 
L5I H6  H6  H 0 1 N N N N N N 4.918  1.518  19.445 -5.257 0.754  0.389  H6  L5I 22 
L5I H7  H7  H 0 1 N N N N N N 10.170 -1.742 22.399 1.829  1.457  0.761  H7  L5I 23 
L5I H8  H8  H 0 1 N N N N N N 12.015 -1.765 20.838 2.631  -0.852 1.340  H8  L5I 24 
L5I H9  H9  H 0 1 N N N N N N 12.503 -0.101 21.309 2.805  -1.191 -0.399 H9  L5I 25 
L5I H10 H10 H 0 1 N N N N N N 12.674 -2.355 23.393 4.210  1.310  0.659  H10 L5I 26 
L5I H11 H11 H 0 1 N N N N N N 11.235 -0.462 24.255 1.185  1.907  -1.591 H11 L5I 27 
L5I H12 H12 H 0 1 N N N N N N 11.173 1.030  23.256 2.936  1.621  -1.452 H12 L5I 28 
L5I H13 H13 H 0 1 N N N N N N 9.649  0.246  23.795 1.872  0.339  -2.079 H13 L5I 29 
L5I H14 H14 H 0 1 N N N N N N 8.506  -1.481 21.182 -0.641 1.689  -0.227 H14 L5I 30 
L5I H15 H15 H 0 1 N N N N N N 5.695  -0.222 21.941 -3.115 2.908  -0.407 H15 L5I 31 
L5I H16 H16 H 0 1 N N N N N N 7.198  0.714  22.247 -3.851 2.610  1.186  H16 L5I 32 
L5I H17 H17 H 0 1 N N N N N N 5.690  1.566  21.771 -2.082 2.547  0.997  H17 L5I 33 
L5I H18 H18 H 0 1 N N N N N N 5.599  1.383  17.111 -5.338 -1.651 -0.128 H18 L5I 34 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
L5I N1  C9  DOUB Y N 1  
L5I N1  C8  SING Y N 2  
L5I C9  C10 SING Y N 3  
L5I C8  C7  DOUB Y N 4  
L5I C10 C11 DOUB Y N 5  
L5I C7  C11 SING Y N 6  
L5I C7  N   SING N N 7  
L5I C11 C12 SING N N 8  
L5I O   C6  DOUB N N 9  
L5I N   C6  SING N N 10 
L5I C6  C1  SING N N 11 
L5I C2  C1  SING N N 12 
L5I C2  C3  SING N N 13 
L5I C1  C   SING N N 14 
L5I C5  C3  SING N N 15 
L5I C5  C4  SING N N 16 
L5I C3  C4  SING N N 17 
L5I C4  H1  SING N N 18 
L5I C4  H2  SING N N 19 
L5I C5  H3  SING N N 20 
L5I C5  H4  SING N N 21 
L5I C8  H5  SING N N 22 
L5I C10 H6  SING N N 23 
L5I C1  H7  SING N N 24 
L5I C2  H8  SING N N 25 
L5I C2  H9  SING N N 26 
L5I C3  H10 SING N N 27 
L5I C   H11 SING N N 28 
L5I C   H12 SING N N 29 
L5I C   H13 SING N N 30 
L5I N   H14 SING N N 31 
L5I C12 H15 SING N N 32 
L5I C12 H16 SING N N 33 
L5I C12 H17 SING N N 34 
L5I C9  H18 SING N N 35 
# 
loop_
_pdbx_chem_comp_descriptor.comp_id 
_pdbx_chem_comp_descriptor.type 
_pdbx_chem_comp_descriptor.program 
_pdbx_chem_comp_descriptor.program_version 
_pdbx_chem_comp_descriptor.descriptor 
L5I SMILES           ACDLabs              12.01 "O=C(Nc1cnccc1C)C(C)CC1CC1"                                                                                        
L5I InChI            InChI                1.06  "InChI=1S/C13H18N2O/c1-9-5-6-14-8-12(9)15-13(16)10(2)7-11-3-4-11/h5-6,8,10-11H,3-4,7H2,1-2H3,(H,15,16)/t10-/m1/s1" 
L5I InChIKey         InChI                1.06  SRXLGHBNKKQZHE-SNVBAGLBSA-N                                                                                        
L5I SMILES_CANONICAL CACTVS               3.385 "C[C@H](CC1CC1)C(=O)Nc2cnccc2C"                                                                                    
L5I SMILES           CACTVS               3.385 "C[CH](CC1CC1)C(=O)Nc2cnccc2C"                                                                                     
L5I SMILES_CANONICAL "OpenEye OEToolkits" 2.0.7 "Cc1ccncc1NC(=O)[C@H](C)CC2CC2"                                                                                    
L5I SMILES           "OpenEye OEToolkits" 2.0.7 "Cc1ccncc1NC(=O)C(C)CC2CC2"                                                                                        
# 
loop_
_pdbx_chem_comp_identifier.comp_id 
_pdbx_chem_comp_identifier.type 
_pdbx_chem_comp_identifier.program 
_pdbx_chem_comp_identifier.program_version 
_pdbx_chem_comp_identifier.identifier 
L5I "SYSTEMATIC NAME" ACDLabs              12.01 "(2R)-3-cyclopropyl-2-methyl-N-(4-methylpyridin-3-yl)propanamide"       
L5I "SYSTEMATIC NAME" "OpenEye OEToolkits" 2.0.7 "(2~{R})-3-cyclopropyl-2-methyl-~{N}-(4-methylpyridin-3-yl)propanamide" 
# 
loop_
_pdbx_chem_comp_audit.comp_id 
_pdbx_chem_comp_audit.action_type 
_pdbx_chem_comp_audit.date 
_pdbx_chem_comp_audit.processing_site 
L5I "Create component" 2023-08-15 RCSB 
L5I "Initial release"  2023-11-08 RCSB 
# 
